RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 ARHGEF5Q12774 1597 aa32.15■■■□□ 2.74
PABPC1-217ENST00000521067 ZNF142P52746 1687 aaPredicted RBP32.15■■■□□ 2.74
PABPC1-217ENST00000521067 TCOF1Q13428 1488 aaKnown RBP32.15■■■□□ 2.74
PABPC1-217ENST00000521067 ZNF335Q9H4Z2 1342 aaPredicted RBP32.14■■■□□ 2.74
PABPC1-217ENST00000521067 WASHC2CQ9Y4E1 1318 aa32.14■■■□□ 2.74
PABPC1-217ENST00000521067 MAP3K1Q13233 1512 aa32.1■■■□□ 2.73
PABPC1-217ENST00000521067 A2ML1A8K2U0 1454 aa32.1■■■□□ 2.73
PABPC1-217ENST00000521067 TNRQ92752 1358 aa32.09■■■□□ 2.73
PABPC1-217ENST00000521067 KDM5DQ9BY66 1539 aa32.08■■■□□ 2.73
PABPC1-217ENST00000521067 PZPP20742 1482 aa32.08■■■□□ 2.73
PABPC1-217ENST00000521067 DNMT1P26358 1616 aaKnown RBP32.06■■■□□ 2.72
PABPC1-217ENST00000521067 MYOM3Q5VTT5 1437 aa32.04■■■□□ 2.72
PABPC1-217ENST00000521067 MIA2Q96PC5 1412 aa32.03■■■□□ 2.72
PABPC1-217ENST00000521067 IQSEC2Q5JU85 1478 aa32.03■■■□□ 2.72
PABPC1-217ENST00000521067 FAM135AQ9P2D6 1515 aa32.02■■■□□ 2.72
PABPC1-217ENST00000521067 MAST1Q9Y2H9 1570 aa32■■■□□ 2.71
PABPC1-217ENST00000521067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.94■■■□□ 2.7
PABPC1-217ENST00000521067 ABCC3O15438 1527 aa31.92■■■□□ 2.7
PABPC1-217ENST00000521067 THEMISQ8N1K5 641 aaPredicted RBP31.92■■■□□ 2.7
PABPC1-217ENST00000521067 RNF17Q9BXT8 1623 aaKnown RBP31.92■■■□□ 2.7
PABPC1-217ENST00000521067 UBAP1LF5GYI3 381 aa31.9■■■□□ 2.7
PABPC1-217ENST00000521067 ANKLE2Q86XL3 938 aa31.9■■■□□ 2.7
PABPC1-217ENST00000521067 NLRP1Q9C000 1473 aa31.9■■■□□ 2.7
PABPC1-217ENST00000521067 NEURL4Q96JN8 1562 aa31.9■■■□□ 2.7
PABPC1-217ENST00000521067 ABCC5O15440 1437 aa31.88■■■□□ 2.69
PABPC1-217ENST00000521067 DISP3Q9P2K9 1392 aa31.87■■■□□ 2.69
PABPC1-217ENST00000521067 MROH1Q8NDA8 1641 aa31.86■■■□□ 2.69
PABPC1-217ENST00000521067 APLP2Q06481 763 aa31.86■■■□□ 2.69
PABPC1-217ENST00000521067 RRP7BPQ9NSQ0 103 aa31.86■■■□□ 2.69
PABPC1-217ENST00000521067 UGGT1Q9NYU2 1555 aa31.85■■■□□ 2.69
PABPC1-217ENST00000521067 KIF15Q9NS87 1388 aa31.83■■■□□ 2.69
PABPC1-217ENST00000521067 EIF2AK4Q9P2K8 1649 aaKnown RBP31.83■■■□□ 2.69
PABPC1-217ENST00000521067 ILDR2Q71H61 639 aa31.83■■■□□ 2.69
PABPC1-217ENST00000521067 DUOX2Q9NRD8 1548 aa31.83■■■□□ 2.69
PABPC1-217ENST00000521067 SPATA31D1Q6ZQQ2 1576 aa31.81■■■□□ 2.68
PABPC1-217ENST00000521067 ERVK-7P63135 1459 aa31.81■■■□□ 2.68
PABPC1-217ENST00000521067 POLR1AO95602 1720 aaPredicted RBP31.79■■■□□ 2.68
PABPC1-217ENST00000521067 PTPN23Q9H3S7 1636 aa31.78■■■□□ 2.68
PABPC1-217ENST00000521067 SHANK2Q9UPX8 1470 aa31.78■■■□□ 2.68
PABPC1-217ENST00000521067 MED14O60244 1454 aa31.78■■■□□ 2.68
PABPC1-217ENST00000521067 ZC3H13Q5T200 1668 aaKnown RBP31.77■■■□□ 2.68
PABPC1-217ENST00000521067 NPHP4O75161 1426 aaPredicted RBP31.76■■■□□ 2.68
PABPC1-217ENST00000521067 DAPK1P53355 1430 aa31.76■■■□□ 2.68
PABPC1-217ENST00000521067 FGD6Q6ZV73 1430 aa31.76■■■□□ 2.68
PABPC1-217ENST00000521067 CHIC2Q9UKJ5 165 aa31.74■■■□□ 2.67
PABPC1-217ENST00000521067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.73■■■□□ 2.67
PABPC1-217ENST00000521067 ERBINQ96RT1 1412 aa31.73■■■□□ 2.67
PABPC1-217ENST00000521067 VWDEQ8N2E2 1590 aa31.73■■■□□ 2.67
PABPC1-217ENST00000521067 CEP152O94986 1710 aa31.72■■■□□ 2.67
PABPC1-217ENST00000521067 CPS1P31327 1500 aa31.71■■■□□ 2.67
PABPC1-217ENST00000521067 DEPDC5O75140 1603 aa31.71■■■□□ 2.67
PABPC1-217ENST00000521067 CFAP65Q6ZU64 1925 aaKnown RBP31.69■■■□□ 2.66
PABPC1-217ENST00000521067 ARHGAP31Q2M1Z3 1444 aa31.69■■■□□ 2.66
PABPC1-217ENST00000521067 CROCC2H7BZ55 1655 aa31.69■■■□□ 2.66
PABPC1-217ENST00000521067 PRDM15P57071 1507 aaPredicted RBP31.68■■■□□ 2.66
PABPC1-217ENST00000521067 LTKP29376 864 aa31.66■■■□□ 2.66
PABPC1-217ENST00000521067 PIP4K2BP78356 416 aa31.66■■■□□ 2.66
PABPC1-217ENST00000521067 TOM1O60784 492 aa31.64■■■□□ 2.66
PABPC1-217ENST00000521067 ANKRD30AQ9BXX3 1397 aa31.63■■■□□ 2.65
PABPC1-217ENST00000521067 SCAF1Q9H7N4 1312 aaKnown RBP31.61■■■□□ 2.65
PABPC1-217ENST00000521067 HSPA1LP34931 641 aa31.61■■■□□ 2.65
PABPC1-217ENST00000521067 IQGAP1P46940 1657 aa31.6■■■□□ 2.65
PABPC1-217ENST00000521067 UBR1Q8IWV7 1749 aa31.6■■■□□ 2.65
PABPC1-217ENST00000521067 TXNDC2Q86VQ3 553 aa31.59■■■□□ 2.65
PABPC1-217ENST00000521067 ARHGAP23Q9P227 1491 aa31.58■■■□□ 2.65
PABPC1-217ENST00000521067 KANK1Q14678 1352 aa31.57■■■□□ 2.64
PABPC1-217ENST00000521067 SCAF11Q99590 1463 aaKnown RBP31.56■■■□□ 2.64
PABPC1-217ENST00000521067 FAM50AQ14320 339 aaKnown RBP31.55■■■□□ 2.64
PABPC1-217ENST00000521067 STRCP1A6NGW2 1772 aa31.54■■■□□ 2.64
PABPC1-217ENST00000521067 IDI1Q13907 227 aa31.54■■■□□ 2.64
PABPC1-217ENST00000521067 SLIT1O75093 1534 aa31.54■■■□□ 2.64
PABPC1-217ENST00000521067 ALKQ9UM73 1620 aa31.53■■■□□ 2.64
PABPC1-217ENST00000521067 SOCS7O14512 581 aa31.53■■■□□ 2.64
PABPC1-217ENST00000521067 LMTK2Q8IWU2 1503 aa31.53■■■□□ 2.64
PABPC1-217ENST00000521067 LRRC7Q96NW7 1537 aa31.53■■■□□ 2.64
PABPC1-217ENST00000521067 ADGRL2O95490 1459 aa31.5■■■□□ 2.63
PABPC1-217ENST00000521067 TMEM2Q9UHN6 1383 aa31.49■■■□□ 2.63
PABPC1-217ENST00000521067 EID1Q9Y6B2 187 aa31.49■■■□□ 2.63
PABPC1-217ENST00000521067 PIK3C2BO00750 1634 aa31.47■■■□□ 2.63
PABPC1-217ENST00000521067 STAG3Q9UJ98 1225 aa31.47■■■□□ 2.63
PABPC1-217ENST00000521067 NOS1P29475 1434 aa31.44■■■□□ 2.62
PABPC1-217ENST00000521067 ANKRD50Q9ULJ7 1429 aa31.42■■■□□ 2.62
PABPC1-217ENST00000521067 SYNMO15061 1565 aa31.42■■■□□ 2.62
PABPC1-217ENST00000521067 EFCAB6Q5THR3 1501 aa31.39■■■□□ 2.62
PABPC1-217ENST00000521067 SENP3Q9H4L4 574 aaPredicted RBP31.36■■■□□ 2.61
PABPC1-217ENST00000521067 SLC52A1Q9NWF4 448 aa31.36■■■□□ 2.61
PABPC1-217ENST00000521067 SLC26A8Q96RN1 970 aa31.34■■■□□ 2.61
PABPC1-217ENST00000521067 KDM5AP29375 1690 aaKnown RBP31.31■■■□□ 2.6
PABPC1-217ENST00000521067 TET3O43151 1660 aa31.3■■■□□ 2.6
PABPC1-217ENST00000521067 KCNA6P17658 529 aa31.29■■■□□ 2.6
PABPC1-217ENST00000521067 MED1Q15648 1581 aaPredicted RBP31.29■■■□□ 2.6
PABPC1-217ENST00000521067 RPRD2Q5VT52 1461 aaKnown RBP31.27■■■□□ 2.6
PABPC1-217ENST00000521067 ADGRB3O60242 1522 aa31.27■■■□□ 2.6
PABPC1-217ENST00000521067 PPARGC1BQ86YN6 1023 aaKnown RBP31.26■■■□□ 2.59
PABPC1-217ENST00000521067 RBM33Q96EV2 1170 aaKnown RBP31.26■■■□□ 2.59
PABPC1-217ENST00000521067 XIRP1Q702N8 1843 aaKnown RBP31.25■■■□□ 2.59
PABPC1-217ENST00000521067 TMEM94Q12767 1356 aa31.24■■■□□ 2.59
PABPC1-217ENST00000521067 ROCK1Q13464 1354 aa31.22■■■□□ 2.59
PABPC1-217ENST00000521067 PROSER2Q86WR7 435 aaPredicted RBP31.2■■■□□ 2.59
PABPC1-217ENST00000521067 ZFYVE9O95405 1425 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms