RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-223ENST00000520828 INO80Q9ULG1 1556 aaPredicted RBP13.26□□□□□ -0.29
PTK2-223ENST00000520828 KIAA1107Q9UPP5 1409 aa13.26□□□□□ -0.29
PTK2-223ENST00000520828 CFDP1Q9UEE9 299 aaPredicted RBP13.24□□□□□ -0.29
PTK2-223ENST00000520828 TNRQ92752 1358 aa13.23□□□□□ -0.29
PTK2-223ENST00000520828 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
PTK2-223ENST00000520828 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
PTK2-223ENST00000520828 POLR1AO95602 1720 aaPredicted RBP13.22□□□□□ -0.29
PTK2-223ENST00000520828 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
PTK2-223ENST00000520828 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.3
PTK2-223ENST00000520828 CCNB3Q8WWL7 1395 aa13.2□□□□□ -0.3
PTK2-223ENST00000520828 FBXO31Q5XUX0 539 aaPredicted RBP13.2□□□□□ -0.3
PTK2-223ENST00000520828 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
PTK2-223ENST00000520828 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
PTK2-223ENST00000520828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.34e-14■■□□□ 14.2
PTK2-223ENST00000520828 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
PTK2-223ENST00000520828 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
PTK2-223ENST00000520828 PZPP20742 1482 aa13.17□□□□□ -0.3
PTK2-223ENST00000520828 DHX29Q7Z478 1369 aaKnown RBP13.17□□□□□ -0.3
PTK2-223ENST00000520828 KIF3BO15066 747 aa13.16□□□□□ -0.3
PTK2-223ENST00000520828 MED14O60244 1454 aa13.16□□□□□ -0.3
PTK2-223ENST00000520828 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
PTK2-223ENST00000520828 RTEL1-TNFRSF6BF6WH68 1400 aa13.15□□□□□ -0.3
PTK2-223ENST00000520828 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
PTK2-223ENST00000520828 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
PTK2-223ENST00000520828 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
PTK2-223ENST00000520828 WASHC2CQ9Y4E1 1318 aa13.14□□□□□ -0.31
PTK2-223ENST00000520828 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
PTK2-223ENST00000520828 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
PTK2-223ENST00000520828 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
PTK2-223ENST00000520828 MBD5Q9P267 1494 aa13.13□□□□□ -0.31
PTK2-223ENST00000520828 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
PTK2-223ENST00000520828 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
PTK2-223ENST00000520828 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
PTK2-223ENST00000520828 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
PTK2-223ENST00000520828 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
PTK2-223ENST00000520828 SYNMO15061 1565 aa13.11□□□□□ -0.31
PTK2-223ENST00000520828 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
PTK2-223ENST00000520828 CCDC141Q6ZP82 1450 aa13.07□□□□□ -0.32
PTK2-223ENST00000520828 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
PTK2-223ENST00000520828 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
PTK2-223ENST00000520828 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
PTK2-223ENST00000520828 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
PTK2-223ENST00000520828 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
PTK2-223ENST00000520828 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
PTK2-223ENST00000520828 TSPY4P0CV99 314 aa13.02□□□□□ -0.33
PTK2-223ENST00000520828 TSPY10P0CW01 314 aa13.02□□□□□ -0.33
PTK2-223ENST00000520828 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
PTK2-223ENST00000520828 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.33
PTK2-223ENST00000520828 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
PTK2-223ENST00000520828 CAMSAP2Q08AD1 1489 aa13.01□□□□□ -0.33
PTK2-223ENST00000520828 ABCC3O15438 1527 aa13.01□□□□□ -0.33
PTK2-223ENST00000520828 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
PTK2-223ENST00000520828 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
PTK2-223ENST00000520828 LTKP29376 864 aa12.98□□□□□ -0.33
PTK2-223ENST00000520828 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
PTK2-223ENST00000520828 UBR1Q8IWV7 1749 aa12.97□□□□□ -0.33
PTK2-223ENST00000520828 ARHGEF5Q12774 1597 aa12.97□□□□□ -0.33
PTK2-223ENST00000520828 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
PTK2-223ENST00000520828 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
PTK2-223ENST00000520828 SLIT1O75093 1534 aa12.96□□□□□ -0.33
PTK2-223ENST00000520828 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
PTK2-223ENST00000520828 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
PTK2-223ENST00000520828 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
PTK2-223ENST00000520828 EIF2AK4Q9P2K8 1649 aaKnown RBP12.93□□□□□ -0.34
PTK2-223ENST00000520828 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
PTK2-223ENST00000520828 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
PTK2-223ENST00000520828 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
PTK2-223ENST00000520828 MAST1Q9Y2H9 1570 aa12.91□□□□□ -0.34
PTK2-223ENST00000520828 KCNA6P17658 529 aa12.91□□□□□ -0.34
PTK2-223ENST00000520828 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
PTK2-223ENST00000520828 TMEM2Q9UHN6 1383 aa12.91□□□□□ -0.34
PTK2-223ENST00000520828 MROH1Q8NDA8 1641 aa12.91□□□□□ -0.34
PTK2-223ENST00000520828 JCADQ9P266 1359 aa12.9□□□□□ -0.34
PTK2-223ENST00000520828 CEP152O94986 1710 aa12.9□□□□□ -0.34
PTK2-223ENST00000520828 ARHGAP31Q2M1Z3 1444 aa12.89□□□□□ -0.35
PTK2-223ENST00000520828 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
PTK2-223ENST00000520828 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
PTK2-223ENST00000520828 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
PTK2-223ENST00000520828 MSH6P52701 1360 aa12.88□□□□□ -0.35
PTK2-223ENST00000520828 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTK2-223ENST00000520828 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
PTK2-223ENST00000520828 PIK3C2BO00750 1634 aa12.87□□□□□ -0.35
PTK2-223ENST00000520828 PRDM15P57071 1507 aaPredicted RBP12.87□□□□□ -0.35
PTK2-223ENST00000520828 DUOX2Q9NRD8 1548 aa12.87□□□□□ -0.35
PTK2-223ENST00000520828 CFAP65Q6ZU64 1925 aaKnown RBP12.86□□□□□ -0.35
PTK2-223ENST00000520828 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
PTK2-223ENST00000520828 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
PTK2-223ENST00000520828 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
PTK2-223ENST00000520828 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
PTK2-223ENST00000520828 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
PTK2-223ENST00000520828 ZNF772Q68DY9 489 aaPredicted RBP12.85□□□□□ -0.35
PTK2-223ENST00000520828 TRIM52Q96A61 297 aa12.84□□□□□ -0.35
PTK2-223ENST00000520828 BCANQ96GW7 911 aa12.84□□□□□ -0.35
PTK2-223ENST00000520828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.358e-7■■□□□ 14
PTK2-223ENST00000520828 TET3O43151 1660 aa12.83□□□□□ -0.35
PTK2-223ENST00000520828 KANK1Q14678 1352 aa12.83□□□□□ -0.36
PTK2-223ENST00000520828 IDI1Q13907 227 aa12.83□□□□□ -0.36
PTK2-223ENST00000520828 SPATA31A6Q5VVP1 1343 aa12.83□□□□□ -0.36
PTK2-223ENST00000520828 KDM5AP29375 1690 aaKnown RBP12.83□□□□□ -0.36
PTK2-223ENST00000520828 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms