RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 KDM5DQ9BY66 1539 aa35.73■■■■□ 3.31
ERGIC1-206ENST00000519860 WASHC2CQ9Y4E1 1318 aa35.72■■■■□ 3.31
ERGIC1-206ENST00000519860 CEP170BQ9Y4F5 1589 aaPredicted RBP35.71■■■■□ 3.31
ERGIC1-206ENST00000519860 ZNF142P52746 1687 aaPredicted RBP35.71■■■■□ 3.31
ERGIC1-206ENST00000519860 FBXO31Q5XUX0 539 aaPredicted RBP35.69■■■■□ 3.3
ERGIC1-206ENST00000519860 NCKAP5LQ9HCH0 1330 aa35.66■■■■□ 3.3
ERGIC1-206ENST00000519860 PTPN23Q9H3S7 1636 aa35.65■■■■□ 3.3
ERGIC1-206ENST00000519860 FAM135AQ9P2D6 1515 aa35.64■■■■□ 3.3
ERGIC1-206ENST00000519860 PZPP20742 1482 aa35.63■■■■□ 3.29
ERGIC1-206ENST00000519860 TNRQ92752 1358 aa35.61■■■■□ 3.29
ERGIC1-206ENST00000519860 RNF17Q9BXT8 1623 aaKnown RBP35.6■■■■□ 3.29
ERGIC1-206ENST00000519860 A2ML1A8K2U0 1454 aa35.59■■■■□ 3.29
ERGIC1-206ENST00000519860 FGD6Q6ZV73 1430 aa35.58■■■■□ 3.29
ERGIC1-206ENST00000519860 ABCC5O15440 1437 aa35.57■■■■□ 3.29
ERGIC1-206ENST00000519860 PLA2R1Q13018 1463 aa35.57■■■■□ 3.28
ERGIC1-206ENST00000519860 CROCC2H7BZ55 1655 aa35.56■■■■□ 3.28
ERGIC1-206ENST00000519860 EIF2AK4Q9P2K8 1649 aaKnown RBP35.56■■■■□ 3.28
ERGIC1-206ENST00000519860 DNMT1P26358 1616 aaKnown RBP35.54■■■■□ 3.28
ERGIC1-206ENST00000519860 DUOX2Q9NRD8 1548 aa35.54■■■■□ 3.28
ERGIC1-206ENST00000519860 SHANK2Q9UPX8 1470 aa35.54■■■■□ 3.28
ERGIC1-206ENST00000519860 KIF15Q9NS87 1388 aa35.53■■■■□ 3.28
ERGIC1-206ENST00000519860 ABCC3O15438 1527 aa35.53■■■■□ 3.28
ERGIC1-206ENST00000519860 DAPK1P53355 1430 aa35.53■■■■□ 3.28
ERGIC1-206ENST00000519860 RRP7BPQ9NSQ0 103 aa35.53■■■■□ 3.28
ERGIC1-206ENST00000519860 PKD2Q13563 968 aa35.52■■■■□ 3.28
ERGIC1-206ENST00000519860 TCOF1Q13428 1488 aaKnown RBP35.52■■■■□ 3.28
ERGIC1-206ENST00000519860 LTBP4Q8N2S1 1624 aa35.5■■■■□ 3.27
ERGIC1-206ENST00000519860 MROH1Q8NDA8 1641 aa35.5■■■■□ 3.27
ERGIC1-206ENST00000519860 ZC3H13Q5T200 1668 aaKnown RBP35.48■■■■□ 3.27
ERGIC1-206ENST00000519860 CHIC2Q9UKJ5 165 aa35.46■■■■□ 3.27
ERGIC1-206ENST00000519860 ZNF335Q9H4Z2 1342 aaPredicted RBP35.45■■■■□ 3.27
ERGIC1-206ENST00000519860 CEP152O94986 1710 aa35.44■■■■□ 3.26
ERGIC1-206ENST00000519860 NLRP1Q9C000 1473 aa35.41■■■■□ 3.26
ERGIC1-206ENST00000519860 ERBINQ96RT1 1412 aa35.41■■■■□ 3.26
ERGIC1-206ENST00000519860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.39■■■■□ 3.26
ERGIC1-206ENST00000519860 FAM50AQ14320 339 aaKnown RBP35.38■■■■□ 3.25
ERGIC1-206ENST00000519860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.38■■■■□ 3.25
ERGIC1-206ENST00000519860 UGGT1Q9NYU2 1555 aa35.38■■■■□ 3.25
ERGIC1-206ENST00000519860 ERVK-7P63135 1459 aa35.37■■■■□ 3.25
ERGIC1-206ENST00000519860 SPATA31D1Q6ZQQ2 1576 aa35.36■■■■□ 3.25
ERGIC1-206ENST00000519860 PRDM15P57071 1507 aaPredicted RBP35.36■■■■□ 3.25
ERGIC1-206ENST00000519860 ANKRD30AQ9BXX3 1397 aa35.36■■■■□ 3.25
ERGIC1-206ENST00000519860 POLR1AO95602 1720 aaPredicted RBP35.35■■■■□ 3.25
ERGIC1-206ENST00000519860 THEMISQ8N1K5 641 aaPredicted RBP35.34■■■■□ 3.25
ERGIC1-206ENST00000519860 NEURL4Q96JN8 1562 aa35.33■■■■□ 3.25
ERGIC1-206ENST00000519860 CFAP65Q6ZU64 1925 aaKnown RBP35.32■■■■□ 3.24
ERGIC1-206ENST00000519860 ANKLE2Q86XL3 938 aa35.3■■■■□ 3.24
ERGIC1-206ENST00000519860 DEPDC5O75140 1603 aa35.28■■■■□ 3.24
ERGIC1-206ENST00000519860 IQSEC2Q5JU85 1478 aa35.28■■■■□ 3.24
ERGIC1-206ENST00000519860 KANK1Q14678 1352 aa35.25■■■■□ 3.23
ERGIC1-206ENST00000519860 ARHGAP31Q2M1Z3 1444 aa35.23■■■■□ 3.23
ERGIC1-206ENST00000519860 ADGRL2O95490 1459 aa35.22■■■■□ 3.23
ERGIC1-206ENST00000519860 NPHP4O75161 1426 aaPredicted RBP35.19■■■■□ 3.22
ERGIC1-206ENST00000519860 PPARGC1BQ86YN6 1023 aaKnown RBP35.17■■■■□ 3.22
ERGIC1-206ENST00000519860 MED14O60244 1454 aa35.16■■■■□ 3.22
ERGIC1-206ENST00000519860 UBR1Q8IWV7 1749 aa35.15■■■■□ 3.22
ERGIC1-206ENST00000519860 VWDEQ8N2E2 1590 aa35.13■■■■□ 3.21
ERGIC1-206ENST00000519860 UBAP1LF5GYI3 381 aa35.13■■■■□ 3.21
ERGIC1-206ENST00000519860 LMTK2Q8IWU2 1503 aa35.11■■■■□ 3.21
ERGIC1-206ENST00000519860 IQGAP1P46940 1657 aa35.11■■■■□ 3.21
ERGIC1-206ENST00000519860 ANKRD50Q9ULJ7 1429 aa35.11■■■■□ 3.21
ERGIC1-206ENST00000519860 CPS1P31327 1500 aa35.06■■■■□ 3.2
ERGIC1-206ENST00000519860 PIK3C2BO00750 1634 aa35.06■■■■□ 3.2
ERGIC1-206ENST00000519860 EFCAB6Q5THR3 1501 aa35.05■■■■□ 3.2
ERGIC1-206ENST00000519860 SCAF11Q99590 1463 aaKnown RBP35.03■■■■□ 3.2
ERGIC1-206ENST00000519860 STAG3Q9UJ98 1225 aa35.03■■■■□ 3.2
ERGIC1-206ENST00000519860 LTKP29376 864 aa35.02■■■■□ 3.2
ERGIC1-206ENST00000519860 ITGAEP38570 1179 aa35.01■■■■□ 3.2
ERGIC1-206ENST00000519860 TXNDC2Q86VQ3 553 aa35.01■■■■□ 3.2
ERGIC1-206ENST00000519860 ARHGAP23Q9P227 1491 aa35.01■■■■□ 3.19
ERGIC1-206ENST00000519860 SLIT1O75093 1534 aa35.01■■■■□ 3.19
ERGIC1-206ENST00000519860 SYNMO15061 1565 aa35■■■■□ 3.19
ERGIC1-206ENST00000519860 IDI1Q13907 227 aa34.99■■■■□ 3.19
ERGIC1-206ENST00000519860 NOS1P29475 1434 aa34.96■■■■□ 3.19
ERGIC1-206ENST00000519860 EID1Q9Y6B2 187 aa34.95■■■■□ 3.19
ERGIC1-206ENST00000519860 SCAF1Q9H7N4 1312 aaKnown RBP34.94■■■■□ 3.18
ERGIC1-206ENST00000519860 TMEM2Q9UHN6 1383 aa34.94■■■■□ 3.18
ERGIC1-206ENST00000519860 ROCK1Q13464 1354 aa34.93■■■■□ 3.18
ERGIC1-206ENST00000519860 STRCP1A6NGW2 1772 aa34.92■■■■□ 3.18
ERGIC1-206ENST00000519860 PIP4K2BP78356 416 aa34.91■■■■□ 3.18
ERGIC1-206ENST00000519860 TET3O43151 1660 aa34.89■■■■□ 3.18
ERGIC1-206ENST00000519860 UNC13BO14795 1591 aa34.89■■■■□ 3.18
ERGIC1-206ENST00000519860 DISP3Q9P2K9 1392 aa34.88■■■■□ 3.17
ERGIC1-206ENST00000519860 RPRD2Q5VT52 1461 aaKnown RBP34.88■■■■□ 3.17
ERGIC1-206ENST00000519860 KDM5AP29375 1690 aaKnown RBP34.88■■■■□ 3.17
ERGIC1-206ENST00000519860 TOM1O60784 492 aa34.87■■■■□ 3.17
ERGIC1-206ENST00000519860 ADGRB3O60242 1522 aa34.86■■■■□ 3.17
ERGIC1-206ENST00000519860 SLC52A1Q9NWF4 448 aa34.85■■■■□ 3.17
ERGIC1-206ENST00000519860 LRRC7Q96NW7 1537 aa34.85■■■■□ 3.17
ERGIC1-206ENST00000519860 GCC2Q8IWJ2 1684 aa34.82■■■■□ 3.17
ERGIC1-206ENST00000519860 SENP3Q9H4L4 574 aaPredicted RBP34.76■■■■□ 3.16
ERGIC1-206ENST00000519860 IQGAP3Q86VI3 1631 aa34.76■■■■□ 3.15
ERGIC1-206ENST00000519860 ALKQ9UM73 1620 aa34.76■■■■□ 3.15
ERGIC1-206ENST00000519860 E9PCH4 1651 aa34.76■■■■□ 3.15
ERGIC1-206ENST00000519860 NUP155O75694 1391 aa34.75■■■■□ 3.15
ERGIC1-206ENST00000519860 HSPA1LP34931 641 aa34.75■■■■□ 3.15
ERGIC1-206ENST00000519860 SLC26A8Q96RN1 970 aa34.75■■■■□ 3.15
ERGIC1-206ENST00000519860 MYO5BQ9ULV0 1848 aa34.71■■■■□ 3.15
ERGIC1-206ENST00000519860 BCANQ96GW7 911 aa34.71■■■■□ 3.15
ERGIC1-206ENST00000519860 CHGAP10645 457 aaKnown RBP34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms