RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
CD47-205ENST00000517766 KHSRPQ92945 711 aaKnown RBP eCLIP9.19□□□□□ -0.945e-8■■□□□ 13.6
CD47-205ENST00000517766 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
CD47-205ENST00000517766 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
CD47-205ENST00000517766 TOPBP1Q92547 1522 aa9.18□□□□□ -0.94
CD47-205ENST00000517766 PRXQ9BXM0 1461 aa9.17□□□□□ -0.94
CD47-205ENST00000517766 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
CD47-205ENST00000517766 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
CD47-205ENST00000517766 CABP2Q9NPB3 220 aa9.16□□□□□ -0.94
CD47-205ENST00000517766 CUX2O14529 1486 aa9.15□□□□□ -0.94
CD47-205ENST00000517766 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
CD47-205ENST00000517766 EFCAB3Q8N7B9 438 aa9.15□□□□□ -0.94
CD47-205ENST00000517766 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.94
CD47-205ENST00000517766 WDR97A6NE52 1622 aa9.14□□□□□ -0.95
CD47-205ENST00000517766 MFRPQ9BY79 579 aa9.14□□□□□ -0.95
CD47-205ENST00000517766 ABCA10Q8WWZ4 1543 aa9.14□□□□□ -0.95
CD47-205ENST00000517766 CADPS2Q86UW7 1296 aa9.13□□□□□ -0.95
CD47-205ENST00000517766 PCGF6Q9BYE7 350 aa9.13□□□□□ -0.95
CD47-205ENST00000517766 POLA1P09884 1462 aaPredicted RBP9.13□□□□□ -0.95
CD47-205ENST00000517766 URB2Q14146 1524 aaKnown RBP9.12□□□□□ -0.95
CD47-205ENST00000517766 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
CD47-205ENST00000517766 CUL7Q14999 1698 aa9.11□□□□□ -0.95
CD47-205ENST00000517766 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
CD47-205ENST00000517766 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
CD47-205ENST00000517766 HRO43593 1189 aa9.1□□□□□ -0.95
CD47-205ENST00000517766 PPP1R37O75864 691 aa9.1□□□□□ -0.95
CD47-205ENST00000517766 NBR1Q14596 966 aa9.1□□□□□ -0.95
CD47-205ENST00000517766 CLIP1P30622 1438 aa9.1□□□□□ -0.95
CD47-205ENST00000517766 IGF1RP08069 1367 aa9.09□□□□□ -0.95
CD47-205ENST00000517766 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
CD47-205ENST00000517766 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
CD47-205ENST00000517766 RAD54L2Q9Y4B4 1467 aa9.08□□□□□ -0.96
CD47-205ENST00000517766 ABCA5Q8WWZ7 1642 aa9.07□□□□□ -0.96
CD47-205ENST00000517766 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
CD47-205ENST00000517766 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
CD47-205ENST00000517766 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
CD47-205ENST00000517766 TARBP1Q13395 1621 aaKnown RBP9.05□□□□□ -0.96
CD47-205ENST00000517766 CTTNBP2Q8WZ74 1663 aa9.04□□□□□ -0.96
CD47-205ENST00000517766 NLRP6P59044 892 aa9.04□□□□□ -0.96
CD47-205ENST00000517766 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
CD47-205ENST00000517766 WDR62O43379 1518 aa9.03□□□□□ -0.96
CD47-205ENST00000517766 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
CD47-205ENST00000517766 GAPVD1Q14C86 1478 aa9.02□□□□□ -0.96
CD47-205ENST00000517766 SOX12O15370 315 aa9.02□□□□□ -0.97
CD47-205ENST00000517766 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
CD47-205ENST00000517766 TK2O00142 265 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 HRCP23327 699 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 PTPN5P54829 565 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 ARAP1Q96P48 1450 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 IFT140Q96RY7 1462 aa8.99□□□□□ -0.97
CD47-205ENST00000517766 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
CD47-205ENST00000517766 ARHGAP35Q9NRY4 1499 aa8.97□□□□□ -0.97
CD47-205ENST00000517766 EFCAB5A4FU69 1503 aa8.97□□□□□ -0.97
CD47-205ENST00000517766 ARHGAP33O14559 1287 aa8.97□□□□□ -0.97
CD47-205ENST00000517766 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
CD47-205ENST00000517766 TDRD9Q8NDG6 1382 aaKnown RBP8.97□□□□□ -0.97
CD47-205ENST00000517766 MICALL2Q8IY33 904 aa8.96□□□□□ -0.98
CD47-205ENST00000517766 LHX6Q9UPM6 363 aa8.96□□□□□ -0.98
CD47-205ENST00000517766 NUDT7P0C024 238 aa8.95□□□□□ -0.98
CD47-205ENST00000517766 RANGAP1P46060 587 aaPredicted RBP8.95□□□□□ -0.98
CD47-205ENST00000517766 LAPTM4AQ15012 233 aa8.95□□□□□ -0.98
CD47-205ENST00000517766 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
CD47-205ENST00000517766 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
CD47-205ENST00000517766 GRIN2BQ13224 1484 aa8.94□□□□□ -0.98
CD47-205ENST00000517766 ADAMTS12P58397 1594 aa8.94□□□□□ -0.98
CD47-205ENST00000517766 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
CD47-205ENST00000517766 FHAD1B1AJZ9 1412 aa8.93□□□□□ -0.98
CD47-205ENST00000517766 MAP3K1Q13233 1512 aa8.93□□□□□ -0.98
CD47-205ENST00000517766 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
CD47-205ENST00000517766 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
CD47-205ENST00000517766 ZEB1P37275 1124 aaPredicted RBP8.91□□□□□ -0.98
CD47-205ENST00000517766 SAMD9Q5K651 1589 aa8.9□□□□□ -0.98
CD47-205ENST00000517766 AQRO60306 1485 aaKnown RBP eCLIP8.9□□□□□ -0.98
CD47-205ENST00000517766 NCKAP5LQ9HCH0 1330 aa8.9□□□□□ -0.98
CD47-205ENST00000517766 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
CD47-205ENST00000517766 CFAP43Q8NDM7 1665 aa8.89□□□□□ -0.99
CD47-205ENST00000517766 TIAM1Q13009 1591 aa8.88□□□□□ -0.99
CD47-205ENST00000517766 ZNF608Q9ULD9 1512 aaPredicted RBP8.88□□□□□ -0.99
CD47-205ENST00000517766 GFRA3O60609 400 aa8.87□□□□□ -0.99
CD47-205ENST00000517766 MAGI1Q96QZ7 1491 aaPredicted RBP8.87□□□□□ -0.99
CD47-205ENST00000517766 FMN1Q68DA7 1419 aa8.87□□□□□ -0.99
CD47-205ENST00000517766 PCF11O94913 1555 aaKnown RBP8.86□□□□□ -0.99
CD47-205ENST00000517766 IQGAP2Q13576 1575 aa8.86□□□□□ -0.99
CD47-205ENST00000517766 TTBK1Q5TCY1 1321 aaPredicted RBP8.86□□□□□ -0.99
CD47-205ENST00000517766 FYCO1Q9BQS8 1478 aa8.86□□□□□ -0.99
CD47-205ENST00000517766 PSEN2P49810 448 aa8.86□□□□□ -0.99
CD47-205ENST00000517766 E2F4Q16254 413 aa8.86□□□□□ -0.99
CD47-205ENST00000517766 SNAPC4Q5SXM2 1469 aa8.85□□□□□ -0.99
CD47-205ENST00000517766 PDE4AP27815 886 aa8.85□□□□□ -0.99
CD47-205ENST00000517766 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
CD47-205ENST00000517766 FHOD3Q2V2M9 1422 aa8.84□□□□□ -0.99
CD47-205ENST00000517766 GRIN2AQ12879 1464 aa8.83□□□□□ -1
CD47-205ENST00000517766 UGGT2Q9NYU1 1516 aa8.82□□□□□ -1
CD47-205ENST00000517766 CRISPLD2Q9H0B8 497 aa8.82□□□□□ -1
CD47-205ENST00000517766 SYNJ2O15056 1496 aa8.82□□□□□ -1
CD47-205ENST00000517766 LRRC9Q6ZRR7 1453 aa8.82□□□□□ -1
CD47-205ENST00000517766 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
CD47-205ENST00000517766 KIAA0586Q9BVV6 1533 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms