RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 NPATQ14207 1427 aa29.33■■■□□ 2.29
LPCAT1-206ENST00000514484 PPARGC1BQ86YN6 1023 aaKnown RBP29.32■■■□□ 2.28
LPCAT1-206ENST00000514484 MYO3AQ8NEV4 1616 aa29.31■■■□□ 2.28
LPCAT1-206ENST00000514484 PTPRKQ15262 1439 aa29.31■■■□□ 2.28
LPCAT1-206ENST00000514484 KIF15Q9NS87 1388 aa29.31■■■□□ 2.28
LPCAT1-206ENST00000514484 PPP6R1Q9UPN7 881 aa29.31■■■□□ 2.28
LPCAT1-206ENST00000514484 FAM50AQ14320 339 aaKnown RBP29.3■■■□□ 2.28
LPCAT1-206ENST00000514484 MROH1Q8NDA8 1641 aa29.3■■■□□ 2.28
LPCAT1-206ENST00000514484 FAM135AQ9P2D6 1515 aa29.3■■■□□ 2.28
LPCAT1-206ENST00000514484 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
LPCAT1-206ENST00000514484 CEP152O94986 1710 aa29.28■■■□□ 2.28
LPCAT1-206ENST00000514484 RRP7BPQ9NSQ0 103 aa29.27■■■□□ 2.28
LPCAT1-206ENST00000514484 CHIC2Q9UKJ5 165 aa29.27■■■□□ 2.28
LPCAT1-206ENST00000514484 ZNF142P52746 1687 aaPredicted RBP29.26■■■□□ 2.27
LPCAT1-206ENST00000514484 ZC3H13Q5T200 1668 aaKnown RBP29.25■■■□□ 2.27
LPCAT1-206ENST00000514484 WASHC2CQ9Y4E1 1318 aa29.24■■■□□ 2.27
LPCAT1-206ENST00000514484 ABCC3O15438 1527 aa29.24■■■□□ 2.27
LPCAT1-206ENST00000514484 ERBINQ96RT1 1412 aa29.22■■■□□ 2.27
LPCAT1-206ENST00000514484 PZPP20742 1482 aa29.22■■■□□ 2.27
LPCAT1-206ENST00000514484 CEP170BQ9Y4F5 1589 aaPredicted RBP29.22■■■□□ 2.27
LPCAT1-206ENST00000514484 ANKRD30AQ9BXX3 1397 aa29.2■■■□□ 2.26
LPCAT1-206ENST00000514484 CFAP65Q6ZU64 1925 aaKnown RBP29.19■■■□□ 2.26
LPCAT1-206ENST00000514484 PRDM15P57071 1507 aaPredicted RBP29.19■■■□□ 2.26
LPCAT1-206ENST00000514484 FBXO31Q5XUX0 539 aaPredicted RBP29.18■■■□□ 2.26
LPCAT1-206ENST00000514484 CAMSAP1Q5T5Y3 1602 aa29.18■■■□□ 2.26
LPCAT1-206ENST00000514484 ADGRL2O95490 1459 aa29.17■■■□□ 2.26
LPCAT1-206ENST00000514484 DEPDC5O75140 1603 aa29.17■■■□□ 2.26
LPCAT1-206ENST00000514484 NCOA1Q15788 1441 aa29.17■■■□□ 2.26
LPCAT1-206ENST00000514484 TNRQ92752 1358 aa29.13■■■□□ 2.25
LPCAT1-206ENST00000514484 A2ML1A8K2U0 1454 aa29.1■■■□□ 2.25
LPCAT1-206ENST00000514484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.09■■■□□ 2.256e-11■□□□□ 10.1
LPCAT1-206ENST00000514484 SPATA31D1Q6ZQQ2 1576 aa29.06■■■□□ 2.24
LPCAT1-206ENST00000514484 ERVK-7P63135 1459 aa29.04■■■□□ 2.24
LPCAT1-206ENST00000514484 ITGAEP38570 1179 aa29.03■■■□□ 2.24
LPCAT1-206ENST00000514484 ILDR1Q86SU0 546 aaPredicted RBP29.02■■■□□ 2.24
LPCAT1-206ENST00000514484 ANKRD50Q9ULJ7 1429 aa29.02■■■□□ 2.24
LPCAT1-206ENST00000514484 VWDEQ8N2E2 1590 aa29.01■■■□□ 2.24
LPCAT1-206ENST00000514484 PLA2R1Q13018 1463 aa29.01■■■□□ 2.23
LPCAT1-206ENST00000514484 NCKAP5LQ9HCH0 1330 aa29■■■□□ 2.23
LPCAT1-206ENST00000514484 PTPRTO14522 1441 aa29■■■□□ 2.23
LPCAT1-206ENST00000514484 KANK1Q14678 1352 aa29■■■□□ 2.23
LPCAT1-206ENST00000514484 NLRP1Q9C000 1473 aa28.99■■■□□ 2.23
LPCAT1-206ENST00000514484 DMRT2Q9Y5R5 561 aa28.99■■■□□ 2.23
LPCAT1-206ENST00000514484 POLR1AO95602 1720 aaPredicted RBP28.99■■■□□ 2.23
LPCAT1-206ENST00000514484 UGGT1Q9NYU2 1555 aa28.96■■■□□ 2.23
LPCAT1-206ENST00000514484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.96■■■□□ 2.23
LPCAT1-206ENST00000514484 ARHGAP31Q2M1Z3 1444 aa28.95■■■□□ 2.23
LPCAT1-206ENST00000514484 LMTK2Q8IWU2 1503 aa28.95■■■□□ 2.23
LPCAT1-206ENST00000514484 ROCK1Q13464 1354 aa28.95■■■□□ 2.22
LPCAT1-206ENST00000514484 RRBP1Q9P2E9 1410 aaKnown RBP28.94■■■□□ 2.22
LPCAT1-206ENST00000514484 EFCAB6Q5THR3 1501 aa28.93■■■□□ 2.22
LPCAT1-206ENST00000514484 UNC13BO14795 1591 aa28.92■■■□□ 2.22
LPCAT1-206ENST00000514484 UBR1Q8IWV7 1749 aa28.91■■■□□ 2.22
LPCAT1-206ENST00000514484 NEURL4Q96JN8 1562 aa28.9■■■□□ 2.22
LPCAT1-206ENST00000514484 PKD2Q13563 968 aa28.88■■■□□ 2.21
LPCAT1-206ENST00000514484 TET3O43151 1660 aa28.86■■■□□ 2.21
LPCAT1-206ENST00000514484 SYNMO15061 1565 aa28.85■■■□□ 2.21
LPCAT1-206ENST00000514484 PIK3C2BO00750 1634 aa28.85■■■□□ 2.21
LPCAT1-206ENST00000514484 CERKQ8TCT0 537 aa28.85■■■□□ 2.21
LPCAT1-206ENST00000514484 GCC2Q8IWJ2 1684 aa28.85■■■□□ 2.21
LPCAT1-206ENST00000514484 LTBP4Q8N2S1 1624 aa28.83■■■□□ 2.21
LPCAT1-206ENST00000514484 THEMISQ8N1K5 641 aaPredicted RBP28.82■■■□□ 2.2
LPCAT1-206ENST00000514484 FBXO41Q8TF61 875 aa28.82■■■□□ 2.2
LPCAT1-206ENST00000514484 IQGAP3Q86VI3 1631 aa28.8■■■□□ 2.2
LPCAT1-206ENST00000514484 E9PCH4 1651 aa28.78■■■□□ 2.2
LPCAT1-206ENST00000514484 ZNF335Q9H4Z2 1342 aaPredicted RBP28.77■■■□□ 2.2
LPCAT1-206ENST00000514484 NOS1P29475 1434 aa28.77■■■□□ 2.2
LPCAT1-206ENST00000514484 ANKLE2Q86XL3 938 aa28.76■■■□□ 2.19
LPCAT1-206ENST00000514484 IQGAP1P46940 1657 aa28.76■■■□□ 2.19
LPCAT1-206ENST00000514484 RPRD2Q5VT52 1461 aaKnown RBP28.75■■■□□ 2.19
LPCAT1-206ENST00000514484 NPHP4O75161 1426 aaPredicted RBP28.72■■■□□ 2.19
LPCAT1-206ENST00000514484 MYO5BQ9ULV0 1848 aa28.72■■■□□ 2.19
LPCAT1-206ENST00000514484 KDM5AP29375 1690 aaKnown RBP28.71■■■□□ 2.19
LPCAT1-206ENST00000514484 NUP155O75694 1391 aa28.71■■■□□ 2.19
LPCAT1-206ENST00000514484 MED14O60244 1454 aa28.71■■■□□ 2.19
LPCAT1-206ENST00000514484 NAIPQ13075 1403 aa28.69■■■□□ 2.18
LPCAT1-206ENST00000514484 ADGRB3O60242 1522 aa28.69■■■□□ 2.18
LPCAT1-206ENST00000514484 SLIT1O75093 1534 aa28.69■■■□□ 2.18
LPCAT1-206ENST00000514484 IDI1Q13907 227 aa28.69■■■□□ 2.18
LPCAT1-206ENST00000514484 ARHGAP23Q9P227 1491 aa28.69■■■□□ 2.18
LPCAT1-206ENST00000514484 SCAF11Q99590 1463 aaKnown RBP28.68■■■□□ 2.18
LPCAT1-206ENST00000514484 STAG3Q9UJ98 1225 aa28.67■■■□□ 2.18
LPCAT1-206ENST00000514484 LTKP29376 864 aa28.62■■■□□ 2.17
LPCAT1-206ENST00000514484 TMEM2Q9UHN6 1383 aa28.62■■■□□ 2.17
LPCAT1-206ENST00000514484 HFM1A2PYH4 1435 aa28.61■■■□□ 2.17
LPCAT1-206ENST00000514484 STRCP1A6NGW2 1772 aa28.6■■■□□ 2.17
LPCAT1-206ENST00000514484 TXNDC2Q86VQ3 553 aa28.6■■■□□ 2.17
LPCAT1-206ENST00000514484 SPHKAPQ2M3C7 1700 aa28.6■■■□□ 2.17
LPCAT1-206ENST00000514484 SLC52A1Q9NWF4 448 aa28.59■■■□□ 2.17
LPCAT1-206ENST00000514484 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
LPCAT1-206ENST00000514484 TMEM131LA2VDJ0 1609 aa28.58■■■□□ 2.17
LPCAT1-206ENST00000514484 EID1Q9Y6B2 187 aa28.55■■■□□ 2.16
LPCAT1-206ENST00000514484 CPS1P31327 1500 aa28.54■■■□□ 2.16
LPCAT1-206ENST00000514484 CHGAP10645 457 aaKnown RBP28.49■■■□□ 2.15
LPCAT1-206ENST00000514484 ZFYVE9O95405 1425 aa28.47■■■□□ 2.15
LPCAT1-206ENST00000514484 TRIM52Q96A61 297 aa28.47■■■□□ 2.15
LPCAT1-206ENST00000514484 SENP3Q9H4L4 574 aaPredicted RBP28.47■■■□□ 2.15
LPCAT1-206ENST00000514484 RIMS2Q9UQ26 1411 aa28.46■■■□□ 2.15
LPCAT1-206ENST00000514484 CLTCL1P53675 1640 aa28.44■■■□□ 2.14
LPCAT1-206ENST00000514484 TRPM2O94759 1503 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms