RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
LPCAT1-206ENST00000514484 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
LPCAT1-206ENST00000514484 ABCC9O60706 1549 aa40.96■■■■■ 4.15
LPCAT1-206ENST00000514484 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
LPCAT1-206ENST00000514484 NACADO15069 1562 aa39.07■■■■□ 3.84
LPCAT1-206ENST00000514484 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
LPCAT1-206ENST00000514484 ZCCHC6Q5VYS8 1495 aaKnown RBP38.73■■■■□ 3.79
LPCAT1-206ENST00000514484 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
LPCAT1-206ENST00000514484 UNC13AQ9UPW8 1703 aa38.51■■■■□ 3.76
LPCAT1-206ENST00000514484 DCAF1Q9Y4B6 1507 aa38.43■■■■□ 3.74
LPCAT1-206ENST00000514484 PABPN1Q86U42 306 aaKnown RBP eCLIP38.19■■■■□ 3.7
LPCAT1-206ENST00000514484 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
LPCAT1-206ENST00000514484 SCRIBQ14160 1630 aa37.98■■■■□ 3.67
LPCAT1-206ENST00000514484 DNAJC5BQ9UF47 199 aa37.81■■■■□ 3.64
LPCAT1-206ENST00000514484 SHROOM4Q9ULL8 1493 aa37.52■■■■□ 3.6
LPCAT1-206ENST00000514484 EIF4G1Q04637 1599 aaKnown RBP37.1■■■■□ 3.53
LPCAT1-206ENST00000514484 CC2D2AQ9P2K1 1620 aa37.05■■■■□ 3.52
LPCAT1-206ENST00000514484 CECR2Q9BXF3 1484 aa36.79■■■■□ 3.48
LPCAT1-206ENST00000514484 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
LPCAT1-206ENST00000514484 BAZ1AQ9NRL2 1556 aaPredicted RBP36.09■■■■□ 3.37
LPCAT1-206ENST00000514484 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
LPCAT1-206ENST00000514484 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
LPCAT1-206ENST00000514484 SMARCA2P51531 1590 aa35.99■■■■□ 3.35
LPCAT1-206ENST00000514484 MROH2BQ7Z745 1585 aa35.92■■■■□ 3.34
LPCAT1-206ENST00000514484 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
LPCAT1-206ENST00000514484 PEG3Q9GZU2 1588 aa35.82■■■■□ 3.32
LPCAT1-206ENST00000514484 BAZ1BQ9UIG0 1483 aaKnown RBP35.76■■■■□ 3.32
LPCAT1-206ENST00000514484 WIZO95785 1651 aa35.58■■■■□ 3.29
LPCAT1-206ENST00000514484 NESP48681 1621 aa35.39■■■■□ 3.26
LPCAT1-206ENST00000514484 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
LPCAT1-206ENST00000514484 ERCC6Q03468 1493 aa35.3■■■■□ 3.24
LPCAT1-206ENST00000514484 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
LPCAT1-206ENST00000514484 TOP2AP11388 1531 aaKnown RBP35.11■■■■□ 3.21
LPCAT1-206ENST00000514484 KIF21AQ7Z4S6 1674 aa35.03■■■■□ 3.2
LPCAT1-206ENST00000514484 CUX2O14529 1486 aa34.97■■■■□ 3.19
LPCAT1-206ENST00000514484 CADPSQ9ULU8 1353 aa34.96■■■■□ 3.19
LPCAT1-206ENST00000514484 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
LPCAT1-206ENST00000514484 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
LPCAT1-206ENST00000514484 CFTRP13569 1480 aa34.71■■■■□ 3.15
LPCAT1-206ENST00000514484 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
LPCAT1-206ENST00000514484 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
LPCAT1-206ENST00000514484 MRC2Q9UBG0 1479 aa34.62■■■■□ 3.13
LPCAT1-206ENST00000514484 CEP164Q9UPV0 1460 aa34.62■■■■□ 3.13
LPCAT1-206ENST00000514484 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
LPCAT1-206ENST00000514484 WDR62O43379 1518 aa34.53■■■■□ 3.12
LPCAT1-206ENST00000514484 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
LPCAT1-206ENST00000514484 SUPT5HO00267 1087 aaKnown RBP34.27■■■■□ 3.08
LPCAT1-206ENST00000514484 DNAJC5Q9H3Z4 198 aa34.19■■■■□ 3.06
LPCAT1-206ENST00000514484 TOPBP1Q92547 1522 aa34.05■■■■□ 3.04
LPCAT1-206ENST00000514484 DNMBPQ6XZF7 1577 aa34■■■■□ 3.03
LPCAT1-206ENST00000514484 ABCC8Q09428 1581 aa33.92■■■■□ 3.02
LPCAT1-206ENST00000514484 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
LPCAT1-206ENST00000514484 ZNF608Q9ULD9 1512 aaPredicted RBP33.81■■■■□ 3
LPCAT1-206ENST00000514484 POLA1P09884 1462 aaPredicted RBP33.75■■■□□ 2.99
LPCAT1-206ENST00000514484 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
LPCAT1-206ENST00000514484 CUX1P39880 1505 aa33.73■■■□□ 2.99
LPCAT1-206ENST00000514484 EIF4G3O43432 1585 aaKnown RBP33.71■■■□□ 2.99
LPCAT1-206ENST00000514484 FGD5Q6ZNL6 1462 aa33.64■■■□□ 2.98
LPCAT1-206ENST00000514484 RAD54L2Q9Y4B4 1467 aa33.63■■■□□ 2.97
LPCAT1-206ENST00000514484 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.966e-12■■■■□ 25.4
LPCAT1-206ENST00000514484 SOGA1O94964 1423 aa33.55■■■□□ 2.96
LPCAT1-206ENST00000514484 WDR97A6NE52 1622 aa33.45■■■□□ 2.95
LPCAT1-206ENST00000514484 TDRD9Q8NDG6 1382 aaKnown RBP33.44■■■□□ 2.94
LPCAT1-206ENST00000514484 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
LPCAT1-206ENST00000514484 CHD1O14646 1710 aa33.39■■■□□ 2.94
LPCAT1-206ENST00000514484 SYNJ1O43426 1573 aa33.37■■■□□ 2.93
LPCAT1-206ENST00000514484 BIVM-ERCC5R4GMW8 1640 aa33.36■■■□□ 2.93
LPCAT1-206ENST00000514484 TOP2BQ02880 1626 aa33.34■■■□□ 2.93
LPCAT1-206ENST00000514484 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.93
LPCAT1-206ENST00000514484 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
LPCAT1-206ENST00000514484 PBRM1Q86U86 1689 aa33.26■■■□□ 2.92
LPCAT1-206ENST00000514484 ABCA10Q8WWZ4 1543 aa33.25■■■□□ 2.91
LPCAT1-206ENST00000514484 ABCA5Q8WWZ7 1642 aa33.22■■■□□ 2.91
LPCAT1-206ENST00000514484 GRIN2BQ13224 1484 aa33.2■■■□□ 2.91
LPCAT1-206ENST00000514484 FBLN2P98095 1184 aa33.19■■■□□ 2.9
LPCAT1-206ENST00000514484 GAPVD1Q14C86 1478 aa33.18■■■□□ 2.9
LPCAT1-206ENST00000514484 MAGI1Q96QZ7 1491 aaPredicted RBP33.15■■■□□ 2.9
LPCAT1-206ENST00000514484 RIMBP3CA6NJZ7 1639 aa33.08■■■□□ 2.89
LPCAT1-206ENST00000514484 RIMBP3BA6NNM3 1639 aa33.08■■■□□ 2.89
LPCAT1-206ENST00000514484 RIMBP3Q9UFD9 1639 aa33.08■■■□□ 2.89
LPCAT1-206ENST00000514484 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
LPCAT1-206ENST00000514484 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
LPCAT1-206ENST00000514484 CHMP7Q8WUX9 453 aaPredicted RBP33■■■□□ 2.87
LPCAT1-206ENST00000514484 ARHGEF11O15085 1522 aa33■■■□□ 2.87
LPCAT1-206ENST00000514484 ADAMTS12P58397 1594 aa32.93■■■□□ 2.86
LPCAT1-206ENST00000514484 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
LPCAT1-206ENST00000514484 ERICH3Q5RHP9 1530 aa32.84■■■□□ 2.85
LPCAT1-206ENST00000514484 GRIN2AQ12879 1464 aa32.8■■■□□ 2.84
LPCAT1-206ENST00000514484 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
LPCAT1-206ENST00000514484 ARAP1Q96P48 1450 aa32.74■■■□□ 2.83
LPCAT1-206ENST00000514484 CEP170Q5SW79 1584 aa32.72■■■□□ 2.83
LPCAT1-206ENST00000514484 CYB5RLQ6IPT4 315 aa32.65■■■□□ 2.82
LPCAT1-206ENST00000514484 NUP160Q12769 1436 aa32.65■■■□□ 2.82
LPCAT1-206ENST00000514484 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
LPCAT1-206ENST00000514484 CUL7Q14999 1698 aa32.54■■■□□ 2.8
LPCAT1-206ENST00000514484 IGF1RP08069 1367 aa32.52■■■□□ 2.8
LPCAT1-206ENST00000514484 ERCC6L2Q5T890 1561 aa32.51■■■□□ 2.79
LPCAT1-206ENST00000514484 SHROOM2Q13796 1616 aa32.49■■■□□ 2.79
LPCAT1-206ENST00000514484 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
LPCAT1-206ENST00000514484 CARMIL1Q5VZK9 1371 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms