RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 ITGAEP38570 1179 aa23.84■■□□□ 1.41
TRIM41-206ENST00000514219 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
TRIM41-206ENST00000514219 AGLP35573 1532 aa23.83■■□□□ 1.41
TRIM41-206ENST00000514219 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
TRIM41-206ENST00000514219 MLH3Q9UHC1 1453 aa23.81■■□□□ 1.4
TRIM41-206ENST00000514219 HFM1A2PYH4 1435 aa23.81■■□□□ 1.4
TRIM41-206ENST00000514219 PLXNC1O60486 1568 aa23.8■■□□□ 1.4
TRIM41-206ENST00000514219 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRIM41-206ENST00000514219 ESF1Q9H501 851 aaKnown RBP23.8■■□□□ 1.4
TRIM41-206ENST00000514219 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
TRIM41-206ENST00000514219 CAMSAP1Q5T5Y3 1602 aa23.79■■□□□ 1.4
TRIM41-206ENST00000514219 CNTLNQ9NXG0 1405 aa23.76■■□□□ 1.39
TRIM41-206ENST00000514219 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
TRIM41-206ENST00000514219 INO80Q9ULG1 1556 aaPredicted RBP23.74■■□□□ 1.39
TRIM41-206ENST00000514219 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
TRIM41-206ENST00000514219 SETD5Q9C0A6 1442 aa23.74■■□□□ 1.39
TRIM41-206ENST00000514219 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
TRIM41-206ENST00000514219 HRCP23327 699 aa23.73■■□□□ 1.39
TRIM41-206ENST00000514219 ZNF335Q9H4Z2 1342 aaPredicted RBP23.73■■□□□ 1.39
TRIM41-206ENST00000514219 NPATQ14207 1427 aa23.72■■□□□ 1.39
TRIM41-206ENST00000514219 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
TRIM41-206ENST00000514219 PTPRKQ15262 1439 aa23.71■■□□□ 1.39
TRIM41-206ENST00000514219 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
TRIM41-206ENST00000514219 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
TRIM41-206ENST00000514219 NCKAP5LQ9HCH0 1330 aa23.69■■□□□ 1.38
TRIM41-206ENST00000514219 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
TRIM41-206ENST00000514219 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
TRIM41-206ENST00000514219 NAIPQ13075 1403 aa23.67■■□□□ 1.38
TRIM41-206ENST00000514219 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
TRIM41-206ENST00000514219 ZNF142P52746 1687 aaPredicted RBP23.65■■□□□ 1.38
TRIM41-206ENST00000514219 PLA2R1Q13018 1463 aa23.63■■□□□ 1.37
TRIM41-206ENST00000514219 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
TRIM41-206ENST00000514219 MED1Q15648 1581 aaPredicted RBP23.63■■□□□ 1.37
TRIM41-206ENST00000514219 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
TRIM41-206ENST00000514219 ZMYM3Q14202 1370 aa23.63■■□□□ 1.37
TRIM41-206ENST00000514219 PKD2Q13563 968 aa23.61■■□□□ 1.37
TRIM41-206ENST00000514219 RRP7BPQ9NSQ0 103 aa23.61■■□□□ 1.37
TRIM41-206ENST00000514219 EIF2AK4Q9P2K8 1649 aaKnown RBP23.61■■□□□ 1.37
TRIM41-206ENST00000514219 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
TRIM41-206ENST00000514219 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
TRIM41-206ENST00000514219 CLTCQ00610 1675 aaKnown RBP23.57■■□□□ 1.36
TRIM41-206ENST00000514219 HSPA1LP34931 641 aa23.55■■□□□ 1.36
TRIM41-206ENST00000514219 A2MP01023 1474 aa23.55■■□□□ 1.36
TRIM41-206ENST00000514219 DHX29Q7Z478 1369 aaKnown RBP23.53■■□□□ 1.36
TRIM41-206ENST00000514219 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
TRIM41-206ENST00000514219 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
TRIM41-206ENST00000514219 UNC13BO14795 1591 aa23.48■■□□□ 1.35
TRIM41-206ENST00000514219 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
TRIM41-206ENST00000514219 KANK1Q14678 1352 aa23.47■■□□□ 1.35
TRIM41-206ENST00000514219 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
TRIM41-206ENST00000514219 CPS1P31327 1500 aa23.45■■□□□ 1.34
TRIM41-206ENST00000514219 KDM5DQ9BY66 1539 aa23.45■■□□□ 1.34
TRIM41-206ENST00000514219 TOM1O60784 492 aa23.45■■□□□ 1.34
TRIM41-206ENST00000514219 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
TRIM41-206ENST00000514219 FAM135AQ9P2D6 1515 aa23.44■■□□□ 1.34
TRIM41-206ENST00000514219 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
TRIM41-206ENST00000514219 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
TRIM41-206ENST00000514219 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
TRIM41-206ENST00000514219 POLR1AO95602 1720 aaPredicted RBP23.42■■□□□ 1.34
TRIM41-206ENST00000514219 PRDM15P57071 1507 aaPredicted RBP23.41■■□□□ 1.34
TRIM41-206ENST00000514219 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
TRIM41-206ENST00000514219 GGT6Q6P531 493 aa23.4■■□□□ 1.34
TRIM41-206ENST00000514219 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
TRIM41-206ENST00000514219 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
TRIM41-206ENST00000514219 IQGAP3Q86VI3 1631 aa23.38■■□□□ 1.33
TRIM41-206ENST00000514219 NUP155O75694 1391 aa23.38■■□□□ 1.33
TRIM41-206ENST00000514219 KIF3BO15066 747 aa23.37■■□□□ 1.33
TRIM41-206ENST00000514219 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
TRIM41-206ENST00000514219 ALKQ9UM73 1620 aa23.35■■□□□ 1.33
TRIM41-206ENST00000514219 DHX57Q6P158 1386 aaKnown RBP23.34■■□□□ 1.33
TRIM41-206ENST00000514219 VWDEQ8N2E2 1590 aa23.32■■□□□ 1.32
TRIM41-206ENST00000514219 SLC4A1APQ9BWU0 796 aaKnown RBP23.32■■□□□ 1.32
TRIM41-206ENST00000514219 TET3O43151 1660 aa23.29■■□□□ 1.32
TRIM41-206ENST00000514219 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
TRIM41-206ENST00000514219 TNRQ92752 1358 aa23.28■■□□□ 1.32
TRIM41-206ENST00000514219 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
TRIM41-206ENST00000514219 PZPP20742 1482 aa23.28■■□□□ 1.32
TRIM41-206ENST00000514219 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
TRIM41-206ENST00000514219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRIM41-206ENST00000514219 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
TRIM41-206ENST00000514219 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
TRIM41-206ENST00000514219 FBXO31Q5XUX0 539 aaPredicted RBP23.24■■□□□ 1.31
TRIM41-206ENST00000514219 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
TRIM41-206ENST00000514219 MED14O60244 1454 aa23.23■■□□□ 1.31
TRIM41-206ENST00000514219 WASHC2CQ9Y4E1 1318 aa23.22■■□□□ 1.31
TRIM41-206ENST00000514219 NPHP4O75161 1426 aaPredicted RBP23.22■■□□□ 1.31
TRIM41-206ENST00000514219 EFCAB6Q5THR3 1501 aa23.22■■□□□ 1.31
TRIM41-206ENST00000514219 ABCC3O15438 1527 aa23.2■■□□□ 1.3
TRIM41-206ENST00000514219 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
TRIM41-206ENST00000514219 IQGAP1P46940 1657 aa23.19■■□□□ 1.3
TRIM41-206ENST00000514219 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
TRIM41-206ENST00000514219 STRCP1A6NGW2 1772 aa23.18■■□□□ 1.3
TRIM41-206ENST00000514219 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
TRIM41-206ENST00000514219 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
TRIM41-206ENST00000514219 CEP152O94986 1710 aa23.17■■□□□ 1.3
TRIM41-206ENST00000514219 LRRC7Q96NW7 1537 aa23.17■■□□□ 1.3
TRIM41-206ENST00000514219 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
TRIM41-206ENST00000514219 SYNMO15061 1565 aa23.16■■□□□ 1.3
TRIM41-206ENST00000514219 RGS17Q9UGC6 210 aaPredicted RBP23.15■■□□□ 1.3
TRIM41-206ENST00000514219 TIMELESSQ9UNS1 1208 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms