RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
TRIM41-206ENST00000514219 ABCC9O60706 1549 aa33.76■■■■□ 3
TRIM41-206ENST00000514219 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
TRIM41-206ENST00000514219 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
TRIM41-206ENST00000514219 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
TRIM41-206ENST00000514219 NACADO15069 1562 aa31.43■■■□□ 2.62
TRIM41-206ENST00000514219 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
TRIM41-206ENST00000514219 UNC13AQ9UPW8 1703 aa31.14■■■□□ 2.58
TRIM41-206ENST00000514219 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
TRIM41-206ENST00000514219 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.56
TRIM41-206ENST00000514219 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.54
TRIM41-206ENST00000514219 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
TRIM41-206ENST00000514219 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
TRIM41-206ENST00000514219 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
TRIM41-206ENST00000514219 CC2D2AQ9P2K1 1620 aa30.48■■■□□ 2.47
TRIM41-206ENST00000514219 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.47
TRIM41-206ENST00000514219 EIF4G1Q04637 1599 aaKnown RBP30.24■■■□□ 2.43
TRIM41-206ENST00000514219 DNAJC5Q9H3Z4 198 aa30.17■■■□□ 2.42
TRIM41-206ENST00000514219 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
TRIM41-206ENST00000514219 CUX2O14529 1486 aa29.4■■■□□ 2.3
TRIM41-206ENST00000514219 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
TRIM41-206ENST00000514219 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
TRIM41-206ENST00000514219 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
TRIM41-206ENST00000514219 NESP48681 1621 aa28.8■■■□□ 2.2
TRIM41-206ENST00000514219 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
TRIM41-206ENST00000514219 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
TRIM41-206ENST00000514219 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
TRIM41-206ENST00000514219 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
TRIM41-206ENST00000514219 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
TRIM41-206ENST00000514219 TRIM41Q8WV44 630 aa28.54■■■□□ 2.16
TRIM41-206ENST00000514219 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
TRIM41-206ENST00000514219 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
TRIM41-206ENST00000514219 KIF21AQ7Z4S6 1674 aa28.43■■■□□ 2.14
TRIM41-206ENST00000514219 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
TRIM41-206ENST00000514219 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
TRIM41-206ENST00000514219 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
TRIM41-206ENST00000514219 PDS5BQ9NTI5 1447 aa28.34■■■□□ 2.13
TRIM41-206ENST00000514219 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.1
TRIM41-206ENST00000514219 WIZO95785 1651 aa28.18■■■□□ 2.1
TRIM41-206ENST00000514219 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
TRIM41-206ENST00000514219 WDR62O43379 1518 aa28.12■■■□□ 2.09
TRIM41-206ENST00000514219 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
TRIM41-206ENST00000514219 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
TRIM41-206ENST00000514219 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
TRIM41-206ENST00000514219 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
TRIM41-206ENST00000514219 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
TRIM41-206ENST00000514219 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
TRIM41-206ENST00000514219 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
TRIM41-206ENST00000514219 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
TRIM41-206ENST00000514219 CFTRP13569 1480 aa27.64■■■□□ 2.01
TRIM41-206ENST00000514219 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
TRIM41-206ENST00000514219 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
TRIM41-206ENST00000514219 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
TRIM41-206ENST00000514219 ZNF608Q9ULD9 1512 aaPredicted RBP27.4■■□□□ 1.98
TRIM41-206ENST00000514219 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
TRIM41-206ENST00000514219 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
TRIM41-206ENST00000514219 CYB5RLQ6IPT4 315 aa27.29■■□□□ 1.96
TRIM41-206ENST00000514219 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
TRIM41-206ENST00000514219 TRHP20396 242 aaPredicted RBP27.21■■□□□ 1.95
TRIM41-206ENST00000514219 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
TRIM41-206ENST00000514219 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
TRIM41-206ENST00000514219 CHD1O14646 1710 aa27.16■■□□□ 1.94
TRIM41-206ENST00000514219 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
TRIM41-206ENST00000514219 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.921e-7■■■■□ 24.9
TRIM41-206ENST00000514219 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
TRIM41-206ENST00000514219 TARBP1Q13395 1621 aaKnown RBP27.02■■□□□ 1.92
TRIM41-206ENST00000514219 FBLN2P98095 1184 aa26.97■■□□□ 1.91
TRIM41-206ENST00000514219 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
TRIM41-206ENST00000514219 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.89
TRIM41-206ENST00000514219 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
TRIM41-206ENST00000514219 CLASP1Q7Z460 1538 aa26.83■■□□□ 1.89
TRIM41-206ENST00000514219 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
TRIM41-206ENST00000514219 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
TRIM41-206ENST00000514219 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
TRIM41-206ENST00000514219 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
TRIM41-206ENST00000514219 TOP2BQ02880 1626 aa26.75■■□□□ 1.87
TRIM41-206ENST00000514219 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
TRIM41-206ENST00000514219 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
TRIM41-206ENST00000514219 SOGA1O94964 1423 aa26.71■■□□□ 1.87
TRIM41-206ENST00000514219 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
TRIM41-206ENST00000514219 CUX1P39880 1505 aa26.66■■□□□ 1.86
TRIM41-206ENST00000514219 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
TRIM41-206ENST00000514219 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
TRIM41-206ENST00000514219 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
TRIM41-206ENST00000514219 SYNJ2O15056 1496 aa26.58■■□□□ 1.85
TRIM41-206ENST00000514219 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
TRIM41-206ENST00000514219 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
TRIM41-206ENST00000514219 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
TRIM41-206ENST00000514219 EEA1Q15075 1411 aa26.43■■□□□ 1.82
TRIM41-206ENST00000514219 ERCC6L2Q5T890 1561 aa26.36■■□□□ 1.81
TRIM41-206ENST00000514219 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
TRIM41-206ENST00000514219 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
TRIM41-206ENST00000514219 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
TRIM41-206ENST00000514219 GRIN2AQ12879 1464 aa26.24■■□□□ 1.79
TRIM41-206ENST00000514219 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
TRIM41-206ENST00000514219 KIF13AQ9H1H9 1805 aa26.22■■□□□ 1.79
TRIM41-206ENST00000514219 NUP160Q12769 1436 aa26.18■■□□□ 1.78
TRIM41-206ENST00000514219 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
TRIM41-206ENST00000514219 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
TRIM41-206ENST00000514219 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms