RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.42	□□□□□ -0.74
RACK1-231	ENST00000514183	NCKAP5L	Q9HCH0	1330 aa		10.42	□□□□□ -0.74
RACK1-231	ENST00000514183	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	CLTC	Q00610	1675 aa	Known RBP	10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	PTPRK	Q15262	1439 aa		10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	ADGB	Q8N7X0	1667 aa		10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	RTN4	Q9NQC3	1192 aa	Known RBP	10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	ATP7A	Q04656	1500 aa		10.41	□□□□□ -0.74
RACK1-231	ENST00000514183	LRRIQ1	Q96JM4	1722 aa		10.4	□□□□□ -0.74
RACK1-231	ENST00000514183	A2M	P01023	1474 aa		10.4	□□□□□ -0.74
RACK1-231	ENST00000514183	FAM135A	Q9P2D6	1515 aa		10.4	□□□□□ -0.74
RACK1-231	ENST00000514183	A2ML1	A8K2U0	1454 aa		10.39	□□□□□ -0.75
RACK1-231	ENST00000514183	GGT6	Q6P531	493 aa		10.39	□□□□□ -0.75
RACK1-231	ENST00000514183	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.39	□□□□□ -0.75
RACK1-231	ENST00000514183	FYCO1	Q9BQS8	1478 aa		10.39	□□□□□ -0.75
RACK1-231	ENST00000514183	POLR1A	O95602	1720 aa	Predicted RBP	10.38	□□□□□ -0.75
RACK1-231	ENST00000514183	PLXNC1	O60486	1568 aa		10.38	□□□□□ -0.75
RACK1-231	ENST00000514183	RSPH4A	Q5TD94	716 aa		10.37	□□□□□ -0.75
RACK1-231	ENST00000514183	ANKLE2	Q86XL3	938 aa		10.37	□□□□□ -0.75
RACK1-231	ENST00000514183	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.37	□□□□□ -0.75
RACK1-231	ENST00000514183	SYCP2	Q9BX26	1530 aa		10.37	□□□□□ -0.75
RACK1-231	ENST00000514183	INO80	Q9ULG1	1556 aa	Predicted RBP	10.36	□□□□□ -0.75
RACK1-231	ENST00000514183	CCNB3	Q8WWL7	1395 aa		10.36	□□□□□ -0.75
RACK1-231	ENST00000514183	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.36	□□□□□ -0.75	2e-9	■■■□□ 17.5
RACK1-231	ENST00000514183	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.36	□□□□□ -0.75
RACK1-231	ENST00000514183	MED1	Q15648	1581 aa	Predicted RBP	10.36	□□□□□ -0.75
RACK1-231	ENST00000514183	SHANK2	Q9UPX8	1470 aa		10.36	□□□□□ -0.75
RACK1-231	ENST00000514183	DNMT1	P26358	1616 aa	Known RBP	10.35	□□□□□ -0.75
RACK1-231	ENST00000514183	PIP4K2B	P78356	416 aa		10.35	□□□□□ -0.75
RACK1-231	ENST00000514183	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.35	□□□□□ -0.75
RACK1-231	ENST00000514183	HSPA1L	P34931	641 aa		10.34	□□□□□ -0.75
RACK1-231	ENST00000514183	TNR	Q92752	1358 aa		10.33	□□□□□ -0.76
RACK1-231	ENST00000514183	PCGF6	Q9BYE7	350 aa		10.33	□□□□□ -0.76
RACK1-231	ENST00000514183	NLRP1	Q9C000	1473 aa		10.33	□□□□□ -0.76
RACK1-231	ENST00000514183	MTUS2	Q5JR59	1369 aa		10.32	□□□□□ -0.76
RACK1-231	ENST00000514183	DHX29	Q7Z478	1369 aa	Known RBP	10.32	□□□□□ -0.76
RACK1-231	ENST00000514183	WASHC2C	Q9Y4E1	1318 aa		10.31	□□□□□ -0.76
RACK1-231	ENST00000514183	DEPDC5	O75140	1603 aa		10.31	□□□□□ -0.76
RACK1-231	ENST00000514183	PZP	P20742	1482 aa		10.31	□□□□□ -0.76
RACK1-231	ENST00000514183	TRIM26	Q12899	539 aa	Predicted RBP	10.31	□□□□□ -0.76
RACK1-231	ENST00000514183		U3KPZ7	1027 aa	Predicted RBP	10.31	□□□□□ -0.76
RACK1-231	ENST00000514183	MED14	O60244	1454 aa		10.3	□□□□□ -0.76
RACK1-231	ENST00000514183	KDM5D	Q9BY66	1539 aa		10.3	□□□□□ -0.76
RACK1-231	ENST00000514183	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.29	□□□□□ -0.76
RACK1-231	ENST00000514183	UGGT1	Q9NYU2	1555 aa		10.29	□□□□□ -0.76
RACK1-231	ENST00000514183	KIF3B	O15066	747 aa		10.28	□□□□□ -0.76
RACK1-231	ENST00000514183	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.28	□□□□□ -0.76
RACK1-231	ENST00000514183	NPHP4	O75161	1426 aa	Predicted RBP	10.28	□□□□□ -0.76
RACK1-231	ENST00000514183	MIA2	Q96PC5	1412 aa		10.28	□□□□□ -0.76
RACK1-231	ENST00000514183	SYNM	O15061	1565 aa		10.28	□□□□□ -0.76
RACK1-231	ENST00000514183	NEURL4	Q96JN8	1562 aa		10.28	□□□□□ -0.76
RACK1-231	ENST00000514183	TSPY4	P0CV99	314 aa		10.27	□□□□□ -0.77
RACK1-231	ENST00000514183	TSPY10	P0CW01	314 aa		10.27	□□□□□ -0.77
RACK1-231	ENST00000514183	VPS8	Q8N3P4	1428 aa		10.27	□□□□□ -0.77
RACK1-231	ENST00000514183	IQGAP1	P46940	1657 aa		10.27	□□□□□ -0.77
RACK1-231	ENST00000514183	RNF17	Q9BXT8	1623 aa	Known RBP	10.26	□□□□□ -0.77
RACK1-231	ENST00000514183	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
RACK1-231	ENST00000514183	VWDE	Q8N2E2	1590 aa		10.26	□□□□□ -0.77
RACK1-231	ENST00000514183	ZC3H13	Q5T200	1668 aa	Known RBP	10.25	□□□□□ -0.77
RACK1-231	ENST00000514183	EHBP1L1	Q8N3D4	1523 aa		10.25	□□□□□ -0.77
RACK1-231	ENST00000514183	CCDC141	Q6ZP82	1450 aa		10.25	□□□□□ -0.77
RACK1-231	ENST00000514183	MBD5	Q9P267	1494 aa		10.25	□□□□□ -0.77
RACK1-231	ENST00000514183	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.24	□□□□□ -0.77
RACK1-231	ENST00000514183	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.23	□□□□□ -0.77
RACK1-231	ENST00000514183	TIAM1	Q13009	1591 aa		10.22	□□□□□ -0.77
RACK1-231	ENST00000514183	EID1	Q9Y6B2	187 aa		10.22	□□□□□ -0.77
RACK1-231	ENST00000514183	LRRC7	Q96NW7	1537 aa		10.21	□□□□□ -0.77
RACK1-231	ENST00000514183	APLP2	Q06481	763 aa		10.2	□□□□□ -0.78
RACK1-231	ENST00000514183	ARHGEF5	Q12774	1597 aa		10.2	□□□□□ -0.78
RACK1-231	ENST00000514183	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.19	□□□□□ -0.78
RACK1-231	ENST00000514183	ZNF644	Q9H582	1327 aa	Predicted RBP	10.19	□□□□□ -0.78
RACK1-231	ENST00000514183	FAM135B	Q49AJ0	1406 aa		10.18	□□□□□ -0.78
RACK1-231	ENST00000514183	CAMSAP2	Q08AD1	1489 aa		10.18	□□□□□ -0.78
RACK1-231	ENST00000514183	SCAF11	Q99590	1463 aa	Known RBP	10.18	□□□□□ -0.78
RACK1-231	ENST00000514183	ALK	Q9UM73	1620 aa		10.17	□□□□□ -0.78
RACK1-231	ENST00000514183	TXNDC2	Q86VQ3	553 aa		10.16	□□□□□ -0.78
RACK1-231	ENST00000514183	CFAP65	Q6ZU64	1925 aa	Known RBP	10.16	□□□□□ -0.78
RACK1-231	ENST00000514183	STRCP1	A6NGW2	1772 aa		10.16	□□□□□ -0.78
RACK1-231	ENST00000514183	UBR1	Q8IWV7	1749 aa		10.16	□□□□□ -0.78
RACK1-231	ENST00000514183	ERVK-7	P63135	1459 aa		10.16	□□□□□ -0.78
RACK1-231	ENST00000514183	LRRC9	Q6ZRR7	1453 aa		10.16	□□□□□ -0.78
RACK1-231	ENST00000514183	ABCC3	O15438	1527 aa		10.15	□□□□□ -0.78
RACK1-231	ENST00000514183	SLIT1	O75093	1534 aa		10.15	□□□□□ -0.78
RACK1-231	ENST00000514183	KDM5A	P29375	1690 aa	Known RBP	10.15	□□□□□ -0.78
RACK1-231	ENST00000514183	MAST1	Q9Y2H9	1570 aa		10.15	□□□□□ -0.78
RACK1-231	ENST00000514183	STAG3	Q9UJ98	1225 aa		10.15	□□□□□ -0.79
RACK1-231	ENST00000514183	NCOA2	Q15596	1464 aa		10.14	□□□□□ -0.79
RACK1-231	ENST00000514183	SLC24A1	O60721	1099 aa		10.14	□□□□□ -0.79
RACK1-231	ENST00000514183	ARHGAP31	Q2M1Z3	1444 aa		10.14	□□□□□ -0.79
RACK1-231	ENST00000514183	ARHGAP23	Q9P227	1491 aa		10.12	□□□□□ -0.79
RACK1-231	ENST00000514183	HDGF	P51858	240 aa	Known RBP	10.12	□□□□□ -0.79
RACK1-231	ENST00000514183	RGS17	Q9UGC6	210 aa	Predicted RBP	10.12	□□□□□ -0.79
RACK1-231	ENST00000514183	DUOX2	Q9NRD8	1548 aa		10.11	□□□□□ -0.79
RACK1-231	ENST00000514183	KANK1	Q14678	1352 aa		10.11	□□□□□ -0.79
RACK1-231	ENST00000514183	KCNA6	P17658	529 aa		10.11	□□□□□ -0.79
RACK1-231	ENST00000514183	XIRP1	Q702N8	1843 aa	Known RBP	10.11	□□□□□ -0.79
RACK1-231	ENST00000514183	KANK4	Q5T7N3	995 aa	Predicted RBP	10.1	□□□□□ -0.79
RACK1-231	ENST00000514183	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.1	□□□□□ -0.79
RACK1-231	ENST00000514183	CEP152	O94986	1710 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms