RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 LHX8Q68G74 356 aa10.06□□□□□ -0.8
GYPB-215ENST00000513677 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
GYPB-215ENST00000513677 G3V3G9 751 aa10.05□□□□□ -0.8
GYPB-215ENST00000513677 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
GYPB-215ENST00000513677 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
GYPB-215ENST00000513677 UACAQ9BZF9 1416 aa10.04□□□□□ -0.8
GYPB-215ENST00000513677 GLI2P10070 1586 aa10.03□□□□□ -0.8
GYPB-215ENST00000513677 ZCCHC11Q5TAX3 1644 aaKnown RBP10.03□□□□□ -0.8
GYPB-215ENST00000513677 MICALL2Q8IY33 904 aa10.02□□□□□ -0.81
GYPB-215ENST00000513677 DISP1Q96F81 1524 aa10.02□□□□□ -0.81
GYPB-215ENST00000513677 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
GYPB-215ENST00000513677 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
GYPB-215ENST00000513677 EPRSP07814 1512 aaKnown RBP10.01□□□□□ -0.81
GYPB-215ENST00000513677 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
GYPB-215ENST00000513677 TEX14Q8IWB6 1497 aa9.99□□□□□ -0.81
GYPB-215ENST00000513677 PLCB2Q00722 1185 aa9.99□□□□□ -0.81
GYPB-215ENST00000513677 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
GYPB-215ENST00000513677 HECW2Q9P2P5 1572 aa9.99□□□□□ -0.81
GYPB-215ENST00000513677 KIAA0556O60303 1618 aa9.98□□□□□ -0.81
GYPB-215ENST00000513677 C3orf67Q6ZVT6 689 aa9.98□□□□□ -0.81
GYPB-215ENST00000513677 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
GYPB-215ENST00000513677 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
GYPB-215ENST00000513677 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
GYPB-215ENST00000513677 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
GYPB-215ENST00000513677 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
GYPB-215ENST00000513677 UGGT2Q9NYU1 1516 aa9.97□□□□□ -0.81
GYPB-215ENST00000513677 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
GYPB-215ENST00000513677 ARID3CA6NKF2 412 aa9.95□□□□□ -0.82
GYPB-215ENST00000513677 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
GYPB-215ENST00000513677 CTTNBP2Q8WZ74 1663 aa9.95□□□□□ -0.82
GYPB-215ENST00000513677 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
GYPB-215ENST00000513677 KIF21BO75037 1637 aa9.93□□□□□ -0.82
GYPB-215ENST00000513677 CD109Q6YHK3 1445 aa9.92□□□□□ -0.82
GYPB-215ENST00000513677 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
GYPB-215ENST00000513677 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
GYPB-215ENST00000513677 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
GYPB-215ENST00000513677 TMEM92Q6UXU6 159 aa9.89□□□□□ -0.83
GYPB-215ENST00000513677 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
GYPB-215ENST00000513677 GOLGA3Q08378 1498 aa9.89□□□□□ -0.83
GYPB-215ENST00000513677 ABCA8O94911 1581 aa9.88□□□□□ -0.83
GYPB-215ENST00000513677 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
GYPB-215ENST00000513677 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
GYPB-215ENST00000513677 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
GYPB-215ENST00000513677 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
GYPB-215ENST00000513677 FAM9AQ8IZU1 332 aaPredicted RBP9.85□□□□□ -0.83
GYPB-215ENST00000513677 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
GYPB-215ENST00000513677 C2orf72A6NCS6 295 aa9.84□□□□□ -0.83
GYPB-215ENST00000513677 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
GYPB-215ENST00000513677 KIF3CO14782 793 aa9.83□□□□□ -0.84
GYPB-215ENST00000513677 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
GYPB-215ENST00000513677 RAPGEF3O95398 923 aa9.82□□□□□ -0.84
GYPB-215ENST00000513677 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
GYPB-215ENST00000513677 ATP10BO94823 1461 aa9.81□□□□□ -0.84
GYPB-215ENST00000513677 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
GYPB-215ENST00000513677 PDE4AP27815 886 aa9.8□□□□□ -0.84
GYPB-215ENST00000513677 ARAP3Q8WWN8 1544 aa9.8□□□□□ -0.84
GYPB-215ENST00000513677 PTPRMP28827 1452 aa9.79□□□□□ -0.84
GYPB-215ENST00000513677 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
GYPB-215ENST00000513677 ABCA9Q8IUA7 1624 aa9.79□□□□□ -0.84
GYPB-215ENST00000513677 FBXO41Q8TF61 875 aa9.79□□□□□ -0.84
GYPB-215ENST00000513677 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
GYPB-215ENST00000513677 RAPGEF6Q8TEU7 1601 aa9.78□□□□□ -0.84
GYPB-215ENST00000513677 ADAMTSL3P82987 1691 aa9.78□□□□□ -0.84
GYPB-215ENST00000513677 MADDQ8WXG6 1647 aa9.78□□□□□ -0.84
GYPB-215ENST00000513677 DSG2Q14126 1118 aa9.77□□□□□ -0.85
GYPB-215ENST00000513677 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.85
GYPB-215ENST00000513677 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
GYPB-215ENST00000513677 FOXK1P85037 733 aa9.76□□□□□ -0.85
GYPB-215ENST00000513677 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
GYPB-215ENST00000513677 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
GYPB-215ENST00000513677 PPP1R15BQ5SWA1 713 aa9.75□□□□□ -0.85
GYPB-215ENST00000513677 MFSD10Q14728 455 aa9.74□□□□□ -0.85
GYPB-215ENST00000513677 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
GYPB-215ENST00000513677 PCF11O94913 1555 aaKnown RBP9.74□□□□□ -0.85
GYPB-215ENST00000513677 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
GYPB-215ENST00000513677 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
GYPB-215ENST00000513677 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
GYPB-215ENST00000513677 NEO1Q92859 1461 aa9.73□□□□□ -0.85
GYPB-215ENST00000513677 HSPA2P54652 639 aa9.73□□□□□ -0.85
GYPB-215ENST00000513677 MLECQ14165 292 aa9.73□□□□□ -0.85
GYPB-215ENST00000513677 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
GYPB-215ENST00000513677 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
GYPB-215ENST00000513677 ARHGEF40Q8TER5 1519 aa9.72□□□□□ -0.85
GYPB-215ENST00000513677 PLEKHD1A6NEE1 506 aa9.71□□□□□ -0.86
GYPB-215ENST00000513677 SNPHO15079 494 aa9.71□□□□□ -0.86
GYPB-215ENST00000513677 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
GYPB-215ENST00000513677 DENND4BO75064 1496 aaPredicted RBP9.71□□□□□ -0.86
GYPB-215ENST00000513677 RICTORQ6R327 1708 aa9.7□□□□□ -0.86
GYPB-215ENST00000513677 HOXB3P14651 431 aaPredicted RBP9.7□□□□□ -0.86
GYPB-215ENST00000513677 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
GYPB-215ENST00000513677 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
GYPB-215ENST00000513677 FANCAO15360 1455 aa9.69□□□□□ -0.86
GYPB-215ENST00000513677 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
GYPB-215ENST00000513677 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
GYPB-215ENST00000513677 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
GYPB-215ENST00000513677 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
GYPB-215ENST00000513677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.67□□□□□ -0.86
GYPB-215ENST00000513677 POGZQ7Z3K3 1410 aa9.67□□□□□ -0.86
GYPB-215ENST00000513677 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
GYPB-215ENST00000513677 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms