RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
GYPB-215ENST00000513677 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
GYPB-215ENST00000513677 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
GYPB-215ENST00000513677 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
GYPB-215ENST00000513677 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
GYPB-215ENST00000513677 FOXD1Q16676 465 aa16.67■□□□□ 0.26
GYPB-215ENST00000513677 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
GYPB-215ENST00000513677 ADRA2BP18089 450 aa16.01■□□□□ 0.15
GYPB-215ENST00000513677 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
GYPB-215ENST00000513677 MSH5O43196 834 aa15.38■□□□□ 0.05
GYPB-215ENST00000513677 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
GYPB-215ENST00000513677 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
GYPB-215ENST00000513677 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
GYPB-215ENST00000513677 NISCHQ9Y2I1 1504 aa14.54□□□□□ -0.08
GYPB-215ENST00000513677 KCNA4P22459 653 aa14.38□□□□□ -0.11
GYPB-215ENST00000513677 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
GYPB-215ENST00000513677 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
GYPB-215ENST00000513677 DMRT2Q9Y5R5 561 aa14.32□□□□□ -0.12
GYPB-215ENST00000513677 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
GYPB-215ENST00000513677 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
GYPB-215ENST00000513677 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
GYPB-215ENST00000513677 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
GYPB-215ENST00000513677 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
GYPB-215ENST00000513677 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
GYPB-215ENST00000513677 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
GYPB-215ENST00000513677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
GYPB-215ENST00000513677 ABCC9O60706 1549 aa13.37□□□□□ -0.27
GYPB-215ENST00000513677 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
GYPB-215ENST00000513677 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
GYPB-215ENST00000513677 ZBTB22O15209 634 aa13.23□□□□□ -0.29
GYPB-215ENST00000513677 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
GYPB-215ENST00000513677 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
GYPB-215ENST00000513677 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
GYPB-215ENST00000513677 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
GYPB-215ENST00000513677 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
GYPB-215ENST00000513677 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
GYPB-215ENST00000513677 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
GYPB-215ENST00000513677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
GYPB-215ENST00000513677 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
GYPB-215ENST00000513677 SAMD1Q6SPF0 538 aaPredicted RBP12.9□□□□□ -0.34
GYPB-215ENST00000513677 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
GYPB-215ENST00000513677 APLP2Q06481 763 aa12.82□□□□□ -0.36
GYPB-215ENST00000513677 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
GYPB-215ENST00000513677 CAPN15O75808 1086 aa12.75□□□□□ -0.37
GYPB-215ENST00000513677 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
GYPB-215ENST00000513677 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
GYPB-215ENST00000513677 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
GYPB-215ENST00000513677 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
GYPB-215ENST00000513677 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
GYPB-215ENST00000513677 ABCB7O75027 752 aa12.53□□□□□ -0.4
GYPB-215ENST00000513677 DSG3P32926 999 aa12.52□□□□□ -0.41
GYPB-215ENST00000513677 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
GYPB-215ENST00000513677 POLA2Q14181 598 aa12.46□□□□□ -0.41
GYPB-215ENST00000513677 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
GYPB-215ENST00000513677 NACADO15069 1562 aa12.43□□□□□ -0.42
GYPB-215ENST00000513677 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
GYPB-215ENST00000513677 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
GYPB-215ENST00000513677 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
GYPB-215ENST00000513677 FBLN2P98095 1184 aa12.19□□□□□ -0.46
GYPB-215ENST00000513677 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
GYPB-215ENST00000513677 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
GYPB-215ENST00000513677 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
GYPB-215ENST00000513677 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
GYPB-215ENST00000513677 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
GYPB-215ENST00000513677 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
GYPB-215ENST00000513677 ZCCHC6Q5VYS8 1495 aaKnown RBP12□□□□□ -0.49
GYPB-215ENST00000513677 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
GYPB-215ENST00000513677 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
GYPB-215ENST00000513677 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
GYPB-215ENST00000513677 DCAF1Q9Y4B6 1507 aa11.92□□□□□ -0.5
GYPB-215ENST00000513677 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
GYPB-215ENST00000513677 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
GYPB-215ENST00000513677 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
GYPB-215ENST00000513677 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
GYPB-215ENST00000513677 FKBP8Q14318 412 aa11.88□□□□□ -0.51
GYPB-215ENST00000513677 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
GYPB-215ENST00000513677 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
GYPB-215ENST00000513677 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
GYPB-215ENST00000513677 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
GYPB-215ENST00000513677 REM2Q8IYK8 340 aaPredicted RBP11.67□□□□□ -0.54
GYPB-215ENST00000513677 PROM2Q8N271 834 aa11.65□□□□□ -0.54
GYPB-215ENST00000513677 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
GYPB-215ENST00000513677 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
GYPB-215ENST00000513677 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
GYPB-215ENST00000513677 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
GYPB-215ENST00000513677 CUX2O14529 1486 aa11.51□□□□□ -0.57
GYPB-215ENST00000513677 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
GYPB-215ENST00000513677 CHRDL2Q6WN34 429 aa11.46□□□□□ -0.57
GYPB-215ENST00000513677 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
GYPB-215ENST00000513677 NESP48681 1621 aa11.43□□□□□ -0.58
GYPB-215ENST00000513677 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
GYPB-215ENST00000513677 ATAD2BQ9ULI0 1458 aa11.43□□□□□ -0.58
GYPB-215ENST00000513677 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
GYPB-215ENST00000513677 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
GYPB-215ENST00000513677 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
GYPB-215ENST00000513677 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
GYPB-215ENST00000513677 BAZ1BQ9UIG0 1483 aaKnown RBP11.35□□□□□ -0.59
GYPB-215ENST00000513677 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
GYPB-215ENST00000513677 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
GYPB-215ENST00000513677 THOC2Q8NI27 1593 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms