RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
PABPC4-218ENST00000513632 ANKLE2Q86XL3 938 aa14.31□□□□□ -0.12
PABPC4-218ENST00000513632 CAMSAP2Q08AD1 1489 aa14.31□□□□□ -0.12
PABPC4-218ENST00000513632 CLTCQ00610 1675 aaKnown RBP14.3□□□□□ -0.12
PABPC4-218ENST00000513632 ADGBQ8N7X0 1667 aa14.3□□□□□ -0.12
PABPC4-218ENST00000513632 APLP2Q06481 763 aa14.3□□□□□ -0.12
PABPC4-218ENST00000513632 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
PABPC4-218ENST00000513632 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
PABPC4-218ENST00000513632 TCOF1Q13428 1488 aaKnown RBP14.29□□□□□ -0.12
PABPC4-218ENST00000513632 CEP170BQ9Y4F5 1589 aaPredicted RBP14.29□□□□□ -0.12
PABPC4-218ENST00000513632 MIA2Q96PC5 1412 aa14.27□□□□□ -0.12
PABPC4-218ENST00000513632 FAM135AQ9P2D6 1515 aa14.26□□□□□ -0.13
PABPC4-218ENST00000513632 PZPP20742 1482 aa14.26□□□□□ -0.13
PABPC4-218ENST00000513632 LRRC9Q6ZRR7 1453 aa14.26□□□□□ -0.13
PABPC4-218ENST00000513632 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
PABPC4-218ENST00000513632 KDM5DQ9BY66 1539 aa14.25□□□□□ -0.13
PABPC4-218ENST00000513632 TOM1O60784 492 aa14.25□□□□□ -0.13
PABPC4-218ENST00000513632 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
PABPC4-218ENST00000513632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.23□□□□□ -0.13
PABPC4-218ENST00000513632 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
PABPC4-218ENST00000513632 NLRP1Q9C000 1473 aa14.23□□□□□ -0.13
PABPC4-218ENST00000513632 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
PABPC4-218ENST00000513632 ARHGEF5Q12774 1597 aa14.22□□□□□ -0.13
PABPC4-218ENST00000513632 SOCS7O14512 581 aa14.22□□□□□ -0.13
PABPC4-218ENST00000513632 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
PABPC4-218ENST00000513632 DNMT1P26358 1616 aaKnown RBP14.21□□□□□ -0.13
PABPC4-218ENST00000513632 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.13
PABPC4-218ENST00000513632 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
PABPC4-218ENST00000513632 MAP3K1Q13233 1512 aa14.2□□□□□ -0.14
PABPC4-218ENST00000513632 UGGT1Q9NYU2 1555 aa14.18□□□□□ -0.14
PABPC4-218ENST00000513632 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
PABPC4-218ENST00000513632 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
PABPC4-218ENST00000513632 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
PABPC4-218ENST00000513632 NPHP4O75161 1426 aaPredicted RBP14.17□□□□□ -0.14
PABPC4-218ENST00000513632 CPS1P31327 1500 aa14.17□□□□□ -0.14
PABPC4-218ENST00000513632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.148e-9■■■□□ 14.9
PABPC4-218ENST00000513632 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
PABPC4-218ENST00000513632 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
PABPC4-218ENST00000513632 MAST1Q9Y2H9 1570 aa14.14□□□□□ -0.15
PABPC4-218ENST00000513632 KANK1Q14678 1352 aa14.14□□□□□ -0.15
PABPC4-218ENST00000513632 KIF15Q9NS87 1388 aa14.14□□□□□ -0.15
PABPC4-218ENST00000513632 HSPA1LP34931 641 aa14.14□□□□□ -0.15
PABPC4-218ENST00000513632 ABCC3O15438 1527 aa14.14□□□□□ -0.15
PABPC4-218ENST00000513632 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
PABPC4-218ENST00000513632 MED14O60244 1454 aa14.13□□□□□ -0.15
PABPC4-218ENST00000513632 TXNDC2Q86VQ3 553 aa14.13□□□□□ -0.15
PABPC4-218ENST00000513632 DUOX2Q9NRD8 1548 aa14.13□□□□□ -0.15
PABPC4-218ENST00000513632 ERVK-7P63135 1459 aa14.12□□□□□ -0.15
PABPC4-218ENST00000513632 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
PABPC4-218ENST00000513632 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
PABPC4-218ENST00000513632 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
PABPC4-218ENST00000513632 NEURL4Q96JN8 1562 aa14.1□□□□□ -0.15
PABPC4-218ENST00000513632 ABCC5O15440 1437 aa14.1□□□□□ -0.15
PABPC4-218ENST00000513632 ARHGAP31Q2M1Z3 1444 aa14.09□□□□□ -0.15
PABPC4-218ENST00000513632 RNF17Q9BXT8 1623 aaKnown RBP14.09□□□□□ -0.15
PABPC4-218ENST00000513632 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
PABPC4-218ENST00000513632 DEPDC5O75140 1603 aa14.08□□□□□ -0.16
PABPC4-218ENST00000513632 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
PABPC4-218ENST00000513632 DAPK1P53355 1430 aa14.07□□□□□ -0.16
PABPC4-218ENST00000513632 LTKP29376 864 aa14.07□□□□□ -0.16
PABPC4-218ENST00000513632 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
PABPC4-218ENST00000513632 POLR1AO95602 1720 aaPredicted RBP14.06□□□□□ -0.16
PABPC4-218ENST00000513632 FGD6Q6ZV73 1430 aa14.06□□□□□ -0.16
PABPC4-218ENST00000513632 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
PABPC4-218ENST00000513632 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
PABPC4-218ENST00000513632 IDI1Q13907 227 aa14.04□□□□□ -0.16
PABPC4-218ENST00000513632 BCANQ96GW7 911 aa14.03□□□□□ -0.16
PABPC4-218ENST00000513632 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
PABPC4-218ENST00000513632 TMEM2Q9UHN6 1383 aa14.03□□□□□ -0.16
PABPC4-218ENST00000513632 PTPN23Q9H3S7 1636 aa14.03□□□□□ -0.16
PABPC4-218ENST00000513632 MROH1Q8NDA8 1641 aa14.02□□□□□ -0.16
PABPC4-218ENST00000513632 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.16
PABPC4-218ENST00000513632 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
PABPC4-218ENST00000513632 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
PABPC4-218ENST00000513632 PRDM15P57071 1507 aaPredicted RBP14.01□□□□□ -0.17
PABPC4-218ENST00000513632 SLIT1O75093 1534 aa14□□□□□ -0.17
PABPC4-218ENST00000513632 ARHGAP23Q9P227 1491 aa14□□□□□ -0.17
PABPC4-218ENST00000513632 KCNA6P17658 529 aa14□□□□□ -0.17
PABPC4-218ENST00000513632 PROSER2Q86WR7 435 aaPredicted RBP13.98□□□□□ -0.17
PABPC4-218ENST00000513632 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
PABPC4-218ENST00000513632 LMTK2Q8IWU2 1503 aa13.96□□□□□ -0.17
PABPC4-218ENST00000513632 CEP152O94986 1710 aa13.96□□□□□ -0.17
PABPC4-218ENST00000513632 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
PABPC4-218ENST00000513632 ANKRD50Q9ULJ7 1429 aa13.96□□□□□ -0.18
PABPC4-218ENST00000513632 UBR1Q8IWV7 1749 aa13.95□□□□□ -0.18
PABPC4-218ENST00000513632 EFCAB6Q5THR3 1501 aa13.95□□□□□ -0.18
PABPC4-218ENST00000513632 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
PABPC4-218ENST00000513632 SYNMO15061 1565 aa13.94□□□□□ -0.18
PABPC4-218ENST00000513632 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
PABPC4-218ENST00000513632 NOS1P29475 1434 aa13.94□□□□□ -0.18
PABPC4-218ENST00000513632 TMEM94Q12767 1356 aa13.94□□□□□ -0.18
PABPC4-218ENST00000513632 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
PABPC4-218ENST00000513632 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
PABPC4-218ENST00000513632 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
PABPC4-218ENST00000513632 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
PABPC4-218ENST00000513632 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
PABPC4-218ENST00000513632 PIK3C2BO00750 1634 aa13.9□□□□□ -0.18
PABPC4-218ENST00000513632 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
PABPC4-218ENST00000513632 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
PABPC4-218ENST00000513632 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms