RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
PABPC4-218ENST00000513632 ABCC9O60706 1549 aa20.29■□□□□ 0.84
PABPC4-218ENST00000513632 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
PABPC4-218ENST00000513632 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.67
PABPC4-218ENST00000513632 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
PABPC4-218ENST00000513632 NACADO15069 1562 aa19.13■□□□□ 0.65
PABPC4-218ENST00000513632 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
PABPC4-218ENST00000513632 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
PABPC4-218ENST00000513632 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
PABPC4-218ENST00000513632 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
PABPC4-218ENST00000513632 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
PABPC4-218ENST00000513632 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
PABPC4-218ENST00000513632 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
PABPC4-218ENST00000513632 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
PABPC4-218ENST00000513632 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
PABPC4-218ENST00000513632 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
PABPC4-218ENST00000513632 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
PABPC4-218ENST00000513632 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
PABPC4-218ENST00000513632 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
PABPC4-218ENST00000513632 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
PABPC4-218ENST00000513632 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
PABPC4-218ENST00000513632 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
PABPC4-218ENST00000513632 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
PABPC4-218ENST00000513632 CUX2O14529 1486 aa17.52■□□□□ 0.4
PABPC4-218ENST00000513632 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
PABPC4-218ENST00000513632 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
PABPC4-218ENST00000513632 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
PABPC4-218ENST00000513632 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
PABPC4-218ENST00000513632 NESP48681 1621 aa17.37■□□□□ 0.37
PABPC4-218ENST00000513632 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
PABPC4-218ENST00000513632 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
PABPC4-218ENST00000513632 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
PABPC4-218ENST00000513632 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
PABPC4-218ENST00000513632 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
PABPC4-218ENST00000513632 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
PABPC4-218ENST00000513632 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
PABPC4-218ENST00000513632 WIZO95785 1651 aa17.04■□□□□ 0.32
PABPC4-218ENST00000513632 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
PABPC4-218ENST00000513632 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
PABPC4-218ENST00000513632 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
PABPC4-218ENST00000513632 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
PABPC4-218ENST00000513632 WDR62O43379 1518 aa16.95■□□□□ 0.3
PABPC4-218ENST00000513632 CFTRP13569 1480 aa16.94■□□□□ 0.3
PABPC4-218ENST00000513632 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
PABPC4-218ENST00000513632 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
PABPC4-218ENST00000513632 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
PABPC4-218ENST00000513632 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
PABPC4-218ENST00000513632 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.28
PABPC4-218ENST00000513632 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
PABPC4-218ENST00000513632 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
PABPC4-218ENST00000513632 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
PABPC4-218ENST00000513632 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
PABPC4-218ENST00000513632 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
PABPC4-218ENST00000513632 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
PABPC4-218ENST00000513632 FBLN2P98095 1184 aa16.51■□□□□ 0.23
PABPC4-218ENST00000513632 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
PABPC4-218ENST00000513632 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
PABPC4-218ENST00000513632 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
PABPC4-218ENST00000513632 SOGA1O94964 1423 aa16.44■□□□□ 0.22
PABPC4-218ENST00000513632 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
PABPC4-218ENST00000513632 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
PABPC4-218ENST00000513632 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
PABPC4-218ENST00000513632 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
PABPC4-218ENST00000513632 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
PABPC4-218ENST00000513632 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
PABPC4-218ENST00000513632 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
PABPC4-218ENST00000513632 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
PABPC4-218ENST00000513632 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
PABPC4-218ENST00000513632 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
PABPC4-218ENST00000513632 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
PABPC4-218ENST00000513632 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
PABPC4-218ENST00000513632 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-218ENST00000513632 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
PABPC4-218ENST00000513632 GRIN2BQ13224 1484 aa16.27■□□□□ 0.19
PABPC4-218ENST00000513632 CUX1P39880 1505 aa16.26■□□□□ 0.19
PABPC4-218ENST00000513632 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
PABPC4-218ENST00000513632 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
PABPC4-218ENST00000513632 CHD1O14646 1710 aa16.24■□□□□ 0.19
PABPC4-218ENST00000513632 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
PABPC4-218ENST00000513632 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
PABPC4-218ENST00000513632 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
PABPC4-218ENST00000513632 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
PABPC4-218ENST00000513632 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
PABPC4-218ENST00000513632 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.18
PABPC4-218ENST00000513632 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.17
PABPC4-218ENST00000513632 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
PABPC4-218ENST00000513632 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
PABPC4-218ENST00000513632 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.15
PABPC4-218ENST00000513632 PBRM1Q86U86 1689 aa16.02■□□□□ 0.15
PABPC4-218ENST00000513632 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
PABPC4-218ENST00000513632 NUP160Q12769 1436 aa15.97■□□□□ 0.15
PABPC4-218ENST00000513632 CHIC1Q5VXU3 224 aa15.96■□□□□ 0.15
PABPC4-218ENST00000513632 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
PABPC4-218ENST00000513632 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
PABPC4-218ENST00000513632 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
PABPC4-218ENST00000513632 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
PABPC4-218ENST00000513632 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
PABPC4-218ENST00000513632 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
PABPC4-218ENST00000513632 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
PABPC4-218ENST00000513632 ERCC6L2Q5T890 1561 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms