RNA–Protein interactions for RNA: ENST00000513274.5

COPB2-211, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-211ENST00000513274 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
COPB2-211ENST00000513274 PKD2Q13563 968 aa18.11■□□□□ 0.49
COPB2-211ENST00000513274 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
COPB2-211ENST00000513274 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
COPB2-211ENST00000513274 TNRQ92752 1358 aa18.09■□□□□ 0.49
COPB2-211ENST00000513274 CFAP65Q6ZU64 1925 aaKnown RBP18.09■□□□□ 0.49
COPB2-211ENST00000513274 A2ML1A8K2U0 1454 aa18.08■□□□□ 0.49
COPB2-211ENST00000513274 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
COPB2-211ENST00000513274 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
COPB2-211ENST00000513274 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
COPB2-211ENST00000513274 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
COPB2-211ENST00000513274 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
COPB2-211ENST00000513274 PZPP20742 1482 aa18.04■□□□□ 0.48
COPB2-211ENST00000513274 APLP2Q06481 763 aa18.03■□□□□ 0.48
COPB2-211ENST00000513274 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
COPB2-211ENST00000513274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.48
COPB2-211ENST00000513274 POLR1AO95602 1720 aaPredicted RBP18.02■□□□□ 0.48
COPB2-211ENST00000513274 MIA2Q96PC5 1412 aa18.01■□□□□ 0.47
COPB2-211ENST00000513274 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
COPB2-211ENST00000513274 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
COPB2-211ENST00000513274 MAP3K1Q13233 1512 aa18■□□□□ 0.47
COPB2-211ENST00000513274 ILDR2Q71H61 639 aa18■□□□□ 0.47
COPB2-211ENST00000513274 ANKLE2Q86XL3 938 aa18■□□□□ 0.47
COPB2-211ENST00000513274 THEMISQ8N1K5 641 aaPredicted RBP18■□□□□ 0.47
COPB2-211ENST00000513274 CEP152O94986 1710 aa17.99■□□□□ 0.47
COPB2-211ENST00000513274 RRP7BPQ9NSQ0 103 aa17.98■□□□□ 0.47
COPB2-211ENST00000513274 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
COPB2-211ENST00000513274 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
COPB2-211ENST00000513274 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
COPB2-211ENST00000513274 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
COPB2-211ENST00000513274 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
COPB2-211ENST00000513274 ABCC3O15438 1527 aa17.97■□□□□ 0.47
COPB2-211ENST00000513274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
COPB2-211ENST00000513274 PIP4K2BP78356 416 aa17.95■□□□□ 0.46
COPB2-211ENST00000513274 CHIC2Q9UKJ5 165 aa17.95■□□□□ 0.46
COPB2-211ENST00000513274 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
COPB2-211ENST00000513274 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
COPB2-211ENST00000513274 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
COPB2-211ENST00000513274 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
COPB2-211ENST00000513274 ZC3H13Q5T200 1668 aaKnown RBP17.93■□□□□ 0.46
COPB2-211ENST00000513274 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
COPB2-211ENST00000513274 ABCC5O15440 1437 aa17.92■□□□□ 0.46
COPB2-211ENST00000513274 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
COPB2-211ENST00000513274 KIF15Q9NS87 1388 aa17.91■□□□□ 0.46
COPB2-211ENST00000513274 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
COPB2-211ENST00000513274 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
COPB2-211ENST00000513274 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
COPB2-211ENST00000513274 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
COPB2-211ENST00000513274 DAPK1P53355 1430 aa17.88■□□□□ 0.45
COPB2-211ENST00000513274 VWDEQ8N2E2 1590 aa17.87■□□□□ 0.45
COPB2-211ENST00000513274 IQGAP1P46940 1657 aa17.87■□□□□ 0.45
COPB2-211ENST00000513274 TOM1O60784 492 aa17.87■□□□□ 0.45
COPB2-211ENST00000513274 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
COPB2-211ENST00000513274 CPS1P31327 1500 aa17.87■□□□□ 0.45
COPB2-211ENST00000513274 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
COPB2-211ENST00000513274 FGD6Q6ZV73 1430 aa17.86■□□□□ 0.45
COPB2-211ENST00000513274 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
COPB2-211ENST00000513274 MED14O60244 1454 aa17.85■□□□□ 0.45
COPB2-211ENST00000513274 HSPA1LP34931 641 aa17.85■□□□□ 0.45
COPB2-211ENST00000513274 STRCP1A6NGW2 1772 aa17.84■□□□□ 0.45
COPB2-211ENST00000513274 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
COPB2-211ENST00000513274 ERBINQ96RT1 1412 aa17.83■□□□□ 0.45
COPB2-211ENST00000513274 LTKP29376 864 aa17.83■□□□□ 0.44
COPB2-211ENST00000513274 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
COPB2-211ENST00000513274 KANK1Q14678 1352 aa17.82■□□□□ 0.44
COPB2-211ENST00000513274 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
COPB2-211ENST00000513274 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
COPB2-211ENST00000513274 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
COPB2-211ENST00000513274 SOCS7O14512 581 aa17.81■□□□□ 0.44
COPB2-211ENST00000513274 ARHGAP31Q2M1Z3 1444 aa17.79■□□□□ 0.44
COPB2-211ENST00000513274 PIK3C2BO00750 1634 aa17.79■□□□□ 0.44
COPB2-211ENST00000513274 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
COPB2-211ENST00000513274 IDI1Q13907 227 aa17.77■□□□□ 0.44
COPB2-211ENST00000513274 EID1Q9Y6B2 187 aa17.77■□□□□ 0.44
COPB2-211ENST00000513274 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.43
COPB2-211ENST00000513274 ALKQ9UM73 1620 aa17.74■□□□□ 0.43
COPB2-211ENST00000513274 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
COPB2-211ENST00000513274 SLIT1O75093 1534 aa17.73■□□□□ 0.43
COPB2-211ENST00000513274 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
COPB2-211ENST00000513274 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
COPB2-211ENST00000513274 BCANQ96GW7 911 aa17.71■□□□□ 0.43
COPB2-211ENST00000513274 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
COPB2-211ENST00000513274 SYNMO15061 1565 aa17.7■□□□□ 0.42
COPB2-211ENST00000513274 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
COPB2-211ENST00000513274 XIRP1Q702N8 1843 aaKnown RBP17.7■□□□□ 0.42
COPB2-211ENST00000513274 EFCAB6Q5THR3 1501 aa17.69■□□□□ 0.42
COPB2-211ENST00000513274 RBM33Q96EV2 1170 aaKnown RBP17.69■□□□□ 0.42
COPB2-211ENST00000513274 MED1Q15648 1581 aaPredicted RBP17.69■□□□□ 0.42
COPB2-211ENST00000513274 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
COPB2-211ENST00000513274 ITGAEP38570 1179 aa17.68■□□□□ 0.42
COPB2-211ENST00000513274 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
COPB2-211ENST00000513274 MYO5BQ9ULV0 1848 aa17.67■□□□□ 0.42
COPB2-211ENST00000513274 NOS1P29475 1434 aa17.65■□□□□ 0.42
COPB2-211ENST00000513274 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
COPB2-211ENST00000513274 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
COPB2-211ENST00000513274 PROSER2Q86WR7 435 aaPredicted RBP17.64■□□□□ 0.41
COPB2-211ENST00000513274 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
COPB2-211ENST00000513274 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
COPB2-211ENST00000513274 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
COPB2-211ENST00000513274 KCNA6P17658 529 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms