RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 DAPK1P53355 1430 aa29.75■■■□□ 2.35
MATR3-221ENST00000513121 CHIC2Q9UKJ5 165 aa29.73■■■□□ 2.35
MATR3-221ENST00000513121 DMRT2Q9Y5R5 561 aa29.73■■■□□ 2.35
MATR3-221ENST00000513121 NCOA1Q15788 1441 aa29.72■■■□□ 2.35
MATR3-221ENST00000513121 KDM5DQ9BY66 1539 aa29.72■■■□□ 2.35
MATR3-221ENST00000513121 KIF15Q9NS87 1388 aa29.72■■■□□ 2.35
MATR3-221ENST00000513121 FBXO41Q8TF61 875 aa29.71■■■□□ 2.35
MATR3-221ENST00000513121 SHANK2Q9UPX8 1470 aa29.71■■■□□ 2.35
MATR3-221ENST00000513121 NCKAP5LQ9HCH0 1330 aa29.69■■■□□ 2.34
MATR3-221ENST00000513121 PZPP20742 1482 aa29.68■■■□□ 2.34
MATR3-221ENST00000513121 DUOX2Q9NRD8 1548 aa29.67■■■□□ 2.34
MATR3-221ENST00000513121 FAM50AQ14320 339 aaKnown RBP29.67■■■□□ 2.34
MATR3-221ENST00000513121 CAMSAP1Q5T5Y3 1602 aa29.67■■■□□ 2.34
MATR3-221ENST00000513121 FAM135AQ9P2D6 1515 aa29.66■■■□□ 2.34
MATR3-221ENST00000513121 TNRQ92752 1358 aa29.66■■■□□ 2.34
MATR3-221ENST00000513121 PTPRTO14522 1441 aa29.66■■■□□ 2.34
MATR3-221ENST00000513121 CERKQ8TCT0 537 aa29.66■■■□□ 2.34
MATR3-221ENST00000513121 DNMT1P26358 1616 aaKnown RBP29.65■■■□□ 2.34
MATR3-221ENST00000513121 MYO3AQ8NEV4 1616 aa29.65■■■□□ 2.34
MATR3-221ENST00000513121 PPARGC1BQ86YN6 1023 aaKnown RBP29.65■■■□□ 2.34
MATR3-221ENST00000513121 RNF17Q9BXT8 1623 aaKnown RBP29.64■■■□□ 2.34
MATR3-221ENST00000513121 ABCC3O15438 1527 aa29.64■■■□□ 2.34
MATR3-221ENST00000513121 CEP170BQ9Y4F5 1589 aaPredicted RBP29.63■■■□□ 2.33
MATR3-221ENST00000513121 MROH1Q8NDA8 1641 aa29.63■■■□□ 2.33
MATR3-221ENST00000513121 A2ML1A8K2U0 1454 aa29.61■■■□□ 2.33
MATR3-221ENST00000513121 CROCC2H7BZ55 1655 aa29.6■■■□□ 2.33
MATR3-221ENST00000513121 EIF2AK4Q9P2K8 1649 aaKnown RBP29.6■■■□□ 2.33
MATR3-221ENST00000513121 ANKRD30AQ9BXX3 1397 aa29.59■■■□□ 2.33
MATR3-221ENST00000513121 ERBINQ96RT1 1412 aa29.59■■■□□ 2.33
MATR3-221ENST00000513121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.58■■■□□ 2.337e-12■□□□□ 11
MATR3-221ENST00000513121 ZNF142P52746 1687 aaPredicted RBP29.56■■■□□ 2.32
MATR3-221ENST00000513121 PLA2R1Q13018 1463 aa29.55■■■□□ 2.32
MATR3-221ENST00000513121 PKD2Q13563 968 aa29.55■■■□□ 2.32
MATR3-221ENST00000513121 ADGRL2O95490 1459 aa29.5■■■□□ 2.31
MATR3-221ENST00000513121 ERVK-7P63135 1459 aa29.49■■■□□ 2.31
MATR3-221ENST00000513121 PRDM15P57071 1507 aaPredicted RBP29.48■■■□□ 2.31
MATR3-221ENST00000513121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.47■■■□□ 2.315e-19■■□□□ 13.5
MATR3-221ENST00000513121 NLRP1Q9C000 1473 aa29.47■■■□□ 2.31
MATR3-221ENST00000513121 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
MATR3-221ENST00000513121 ZC3H13Q5T200 1668 aaKnown RBP29.46■■■□□ 2.31
MATR3-221ENST00000513121 ZNF335Q9H4Z2 1342 aaPredicted RBP29.45■■■□□ 2.31
MATR3-221ENST00000513121 LTBP4Q8N2S1 1624 aa29.45■■■□□ 2.31
MATR3-221ENST00000513121 THEMISQ8N1K5 641 aaPredicted RBP29.45■■■□□ 2.31
MATR3-221ENST00000513121 CEP152O94986 1710 aa29.44■■■□□ 2.3
MATR3-221ENST00000513121 ARHGAP31Q2M1Z3 1444 aa29.44■■■□□ 2.3
MATR3-221ENST00000513121 DEPDC5O75140 1603 aa29.41■■■□□ 2.3
MATR3-221ENST00000513121 KANK1Q14678 1352 aa29.4■■■□□ 2.3
MATR3-221ENST00000513121 UGGT1Q9NYU2 1555 aa29.4■■■□□ 2.3
MATR3-221ENST00000513121 ANKRD50Q9ULJ7 1429 aa29.4■■■□□ 2.3
MATR3-221ENST00000513121 ANKLE2Q86XL3 938 aa29.4■■■□□ 2.3
MATR3-221ENST00000513121 ITGAEP38570 1179 aa29.38■■■□□ 2.29
MATR3-221ENST00000513121 VWDEQ8N2E2 1590 aa29.37■■■□□ 2.29
MATR3-221ENST00000513121 LMTK2Q8IWU2 1503 aa29.35■■■□□ 2.29
MATR3-221ENST00000513121 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
MATR3-221ENST00000513121 ROCK1Q13464 1354 aa29.32■■■□□ 2.28
MATR3-221ENST00000513121 CFAP65Q6ZU64 1925 aaKnown RBP29.31■■■□□ 2.28
MATR3-221ENST00000513121 IDI1Q13907 227 aa29.28■■■□□ 2.28
MATR3-221ENST00000513121 NPHP4O75161 1426 aaPredicted RBP29.28■■■□□ 2.28
MATR3-221ENST00000513121 MED14O60244 1454 aa29.26■■■□□ 2.27
MATR3-221ENST00000513121 LTKP29376 864 aa29.26■■■□□ 2.27
MATR3-221ENST00000513121 NOS1P29475 1434 aa29.25■■■□□ 2.27
MATR3-221ENST00000513121 EFCAB6Q5THR3 1501 aa29.22■■■□□ 2.27
MATR3-221ENST00000513121 POLR1AO95602 1720 aaPredicted RBP29.21■■■□□ 2.27
MATR3-221ENST00000513121 TXNDC2Q86VQ3 553 aa29.21■■■□□ 2.27
MATR3-221ENST00000513121 RRBP1Q9P2E9 1410 aaKnown RBP29.2■■■□□ 2.27
MATR3-221ENST00000513121 UBR1Q8IWV7 1749 aa29.2■■■□□ 2.27
MATR3-221ENST00000513121 IQSEC2Q5JU85 1478 aa29.2■■■□□ 2.26
MATR3-221ENST00000513121 SYNMO15061 1565 aa29.19■■■□□ 2.26
MATR3-221ENST00000513121 ARHGAP23Q9P227 1491 aa29.19■■■□□ 2.26
MATR3-221ENST00000513121 STAG3Q9UJ98 1225 aa29.17■■■□□ 2.26
MATR3-221ENST00000513121 TMEM2Q9UHN6 1383 aa29.16■■■□□ 2.26
MATR3-221ENST00000513121 SCAF11Q99590 1463 aaKnown RBP29.16■■■□□ 2.26
MATR3-221ENST00000513121 PIK3C2BO00750 1634 aa29.16■■■□□ 2.26
MATR3-221ENST00000513121 SLIT1O75093 1534 aa29.15■■■□□ 2.26
MATR3-221ENST00000513121 SLC52A1Q9NWF4 448 aa29.14■■■□□ 2.26
MATR3-221ENST00000513121 NUP155O75694 1391 aa29.13■■■□□ 2.25
MATR3-221ENST00000513121 UNC13BO14795 1591 aa29.13■■■□□ 2.25
MATR3-221ENST00000513121 RPRD2Q5VT52 1461 aaKnown RBP29.12■■■□□ 2.25
MATR3-221ENST00000513121 UBAP1LF5GYI3 381 aa29.12■■■□□ 2.25
MATR3-221ENST00000513121 EID1Q9Y6B2 187 aa29.11■■■□□ 2.25
MATR3-221ENST00000513121 IQGAP1P46940 1657 aa29.1■■■□□ 2.25
MATR3-221ENST00000513121 TET3O43151 1660 aa29.08■■■□□ 2.25
MATR3-221ENST00000513121 CPS1P31327 1500 aa29.07■■■□□ 2.24
MATR3-221ENST00000513121 ADGRB3O60242 1522 aa29.02■■■□□ 2.24
MATR3-221ENST00000513121 NAIPQ13075 1403 aa29.02■■■□□ 2.24
MATR3-221ENST00000513121 IQGAP3Q86VI3 1631 aa29.02■■■□□ 2.24
MATR3-221ENST00000513121 E9PCH4 1651 aa28.99■■■□□ 2.23
MATR3-221ENST00000513121 SLC26A8Q96RN1 970 aa28.98■■■□□ 2.23
MATR3-221ENST00000513121 SENP3Q9H4L4 574 aaPredicted RBP28.98■■■□□ 2.23
MATR3-221ENST00000513121 GCC2Q8IWJ2 1684 aa28.98■■■□□ 2.23
MATR3-221ENST00000513121 KDM5AP29375 1690 aaKnown RBP28.97■■■□□ 2.23
MATR3-221ENST00000513121 CHGAP10645 457 aaKnown RBP28.97■■■□□ 2.23
MATR3-221ENST00000513121 LRRC7Q96NW7 1537 aa28.97■■■□□ 2.23
MATR3-221ENST00000513121 STRCP1A6NGW2 1772 aa28.97■■■□□ 2.23
MATR3-221ENST00000513121 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
MATR3-221ENST00000513121 PIP4K2BP78356 416 aa28.93■■■□□ 2.22
MATR3-221ENST00000513121 TOM1O60784 492 aa28.92■■■□□ 2.22
MATR3-221ENST00000513121 RIMS2Q9UQ26 1411 aa28.92■■■□□ 2.22
MATR3-221ENST00000513121 NUTM2DQ5VT03 806 aaPredicted RBP28.91■■■□□ 2.22
MATR3-221ENST00000513121 TMEM131LA2VDJ0 1609 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms