RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
CDK7-208ENST00000512687 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
CDK7-208ENST00000512687 MROH1Q8NDA8 1641 aa18.92■□□□□ 0.62
CDK7-208ENST00000512687 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
CDK7-208ENST00000512687 CEP152O94986 1710 aa18.91■□□□□ 0.62
CDK7-208ENST00000512687 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
CDK7-208ENST00000512687 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
CDK7-208ENST00000512687 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
CDK7-208ENST00000512687 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.62
CDK7-208ENST00000512687 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
CDK7-208ENST00000512687 APLP2Q06481 763 aa18.89■□□□□ 0.61
CDK7-208ENST00000512687 KIF3BO15066 747 aa18.88■□□□□ 0.61
CDK7-208ENST00000512687 SHANK2Q9UPX8 1470 aa18.88■□□□□ 0.61
CDK7-208ENST00000512687 CAMSAP1Q5T5Y3 1602 aa18.88■□□□□ 0.61
CDK7-208ENST00000512687 ABCC5O15440 1437 aa18.87■□□□□ 0.61
CDK7-208ENST00000512687 TSPY4P0CV99 314 aa18.87■□□□□ 0.61
CDK7-208ENST00000512687 TSPY10P0CW01 314 aa18.87■□□□□ 0.61
CDK7-208ENST00000512687 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
CDK7-208ENST00000512687 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
CDK7-208ENST00000512687 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
CDK7-208ENST00000512687 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
CDK7-208ENST00000512687 DAPK1P53355 1430 aa18.84■□□□□ 0.61
CDK7-208ENST00000512687 ABCC3O15438 1527 aa18.84■□□□□ 0.61
CDK7-208ENST00000512687 PZPP20742 1482 aa18.84■□□□□ 0.61
CDK7-208ENST00000512687 POLR1AO95602 1720 aaPredicted RBP18.82■□□□□ 0.6
CDK7-208ENST00000512687 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
CDK7-208ENST00000512687 PRDM15P57071 1507 aaPredicted RBP18.8■□□□□ 0.6
CDK7-208ENST00000512687 KCNA4P22459 653 aa18.8■□□□□ 0.6
CDK7-208ENST00000512687 PTPRTO14522 1441 aa18.79■□□□□ 0.6
CDK7-208ENST00000512687 KIF15Q9NS87 1388 aa18.79■□□□□ 0.6
CDK7-208ENST00000512687 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
CDK7-208ENST00000512687 FBXO31Q5XUX0 539 aaPredicted RBP18.77■□□□□ 0.6
CDK7-208ENST00000512687 PLA2R1Q13018 1463 aa18.77■□□□□ 0.59
CDK7-208ENST00000512687 WASHC2CQ9Y4E1 1318 aa18.76■□□□□ 0.59
CDK7-208ENST00000512687 ERBINQ96RT1 1412 aa18.76■□□□□ 0.59
CDK7-208ENST00000512687 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
CDK7-208ENST00000512687 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
CDK7-208ENST00000512687 TNRQ92752 1358 aa18.75■□□□□ 0.59
CDK7-208ENST00000512687 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
CDK7-208ENST00000512687 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
CDK7-208ENST00000512687 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
CDK7-208ENST00000512687 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
CDK7-208ENST00000512687 RRP7BPQ9NSQ0 103 aa18.72■□□□□ 0.59
CDK7-208ENST00000512687 NCKAP5LQ9HCH0 1330 aa18.72■□□□□ 0.59
CDK7-208ENST00000512687 ERVK-7P63135 1459 aa18.71■□□□□ 0.59
CDK7-208ENST00000512687 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.59
CDK7-208ENST00000512687 UBR1Q8IWV7 1749 aa18.7■□□□□ 0.58
CDK7-208ENST00000512687 CERKQ8TCT0 537 aa18.7■□□□□ 0.58
CDK7-208ENST00000512687 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
CDK7-208ENST00000512687 NLRP1Q9C000 1473 aa18.69■□□□□ 0.58
CDK7-208ENST00000512687 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
CDK7-208ENST00000512687 UGGT1Q9NYU2 1555 aa18.68■□□□□ 0.58
CDK7-208ENST00000512687 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
CDK7-208ENST00000512687 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.58
CDK7-208ENST00000512687 PKD2Q13563 968 aa18.64■□□□□ 0.57
CDK7-208ENST00000512687 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
CDK7-208ENST00000512687 PIK3C2BO00750 1634 aa18.63■□□□□ 0.57
CDK7-208ENST00000512687 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
CDK7-208ENST00000512687 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
CDK7-208ENST00000512687 UNC13BO14795 1591 aa18.62■□□□□ 0.57
CDK7-208ENST00000512687 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
CDK7-208ENST00000512687 SYNMO15061 1565 aa18.61■□□□□ 0.57
CDK7-208ENST00000512687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDK7-208ENST00000512687 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
CDK7-208ENST00000512687 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
CDK7-208ENST00000512687 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
CDK7-208ENST00000512687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDK7-208ENST00000512687 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
CDK7-208ENST00000512687 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
CDK7-208ENST00000512687 TET3O43151 1660 aa18.59■□□□□ 0.57
CDK7-208ENST00000512687 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.57
CDK7-208ENST00000512687 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
CDK7-208ENST00000512687 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
CDK7-208ENST00000512687 KANK1Q14678 1352 aa18.57■□□□□ 0.56
CDK7-208ENST00000512687 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
CDK7-208ENST00000512687 MED14O60244 1454 aa18.57■□□□□ 0.56
CDK7-208ENST00000512687 E9PCH4 1651 aa18.54■□□□□ 0.56
CDK7-208ENST00000512687 IQGAP3Q86VI3 1631 aa18.54■□□□□ 0.56
CDK7-208ENST00000512687 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
CDK7-208ENST00000512687 NPHP4O75161 1426 aaPredicted RBP18.53■□□□□ 0.56
CDK7-208ENST00000512687 SLIT1O75093 1534 aa18.53■□□□□ 0.56
CDK7-208ENST00000512687 ROCK1Q13464 1354 aa18.53■□□□□ 0.56
CDK7-208ENST00000512687 ARHGAP23Q9P227 1491 aa18.52■□□□□ 0.56
CDK7-208ENST00000512687 NOS1P29475 1434 aa18.51■□□□□ 0.55
CDK7-208ENST00000512687 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
CDK7-208ENST00000512687 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
CDK7-208ENST00000512687 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
CDK7-208ENST00000512687 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
CDK7-208ENST00000512687 SCAF11Q99590 1463 aaKnown RBP18.48■□□□□ 0.55
CDK7-208ENST00000512687 CPS1P31327 1500 aa18.48■□□□□ 0.55
CDK7-208ENST00000512687 ITGAEP38570 1179 aa18.47■□□□□ 0.55
CDK7-208ENST00000512687 XIRP1Q702N8 1843 aaKnown RBP18.46■□□□□ 0.55
CDK7-208ENST00000512687 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
CDK7-208ENST00000512687 LTKP29376 864 aa18.43■□□□□ 0.54
CDK7-208ENST00000512687 IDI1Q13907 227 aa18.43■□□□□ 0.54
CDK7-208ENST00000512687 SPHKAPQ2M3C7 1700 aa18.42■□□□□ 0.54
CDK7-208ENST00000512687 TMEM2Q9UHN6 1383 aa18.42■□□□□ 0.54
CDK7-208ENST00000512687 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
CDK7-208ENST00000512687 TXNDC2Q86VQ3 553 aa18.38■□□□□ 0.53
CDK7-208ENST00000512687 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms