RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FBXO31Q5XUX0 539 aaPredicted RBP19.87■□□□□ 0.77
VEGFA-216ENST00000512683 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
VEGFA-216ENST00000512683 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
VEGFA-216ENST00000512683 ANKLE2Q86XL3 938 aa19.86■□□□□ 0.77
VEGFA-216ENST00000512683 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
VEGFA-216ENST00000512683 CLTCQ00610 1675 aaKnown RBP19.85■□□□□ 0.77
VEGFA-216ENST00000512683 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
VEGFA-216ENST00000512683 MAP3K1Q13233 1512 aa19.84■□□□□ 0.77
VEGFA-216ENST00000512683 PZPP20742 1482 aa19.84■□□□□ 0.77
VEGFA-216ENST00000512683 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
VEGFA-216ENST00000512683 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.77
VEGFA-216ENST00000512683 UBAP1LF5GYI3 381 aa19.83■□□□□ 0.77
VEGFA-216ENST00000512683 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.76
VEGFA-216ENST00000512683 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
VEGFA-216ENST00000512683 ZNF142P52746 1687 aaPredicted RBP19.81■□□□□ 0.76
VEGFA-216ENST00000512683 NLRP1Q9C000 1473 aa19.8■□□□□ 0.76
VEGFA-216ENST00000512683 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
VEGFA-216ENST00000512683 KANK4Q5T7N3 995 aaPredicted RBP19.78■□□□□ 0.76
VEGFA-216ENST00000512683 TOM1O60784 492 aa19.77■□□□□ 0.76
VEGFA-216ENST00000512683 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
VEGFA-216ENST00000512683 APLP2Q06481 763 aa19.76■□□□□ 0.75
VEGFA-216ENST00000512683 DNMT1P26358 1616 aaKnown RBP19.76■□□□□ 0.75
VEGFA-216ENST00000512683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.74■□□□□ 0.751e-6■■■■□ 21.3
VEGFA-216ENST00000512683 SOCS7O14512 581 aa19.74■□□□□ 0.75
VEGFA-216ENST00000512683 MED14O60244 1454 aa19.72■□□□□ 0.75
VEGFA-216ENST00000512683 CPS1P31327 1500 aa19.71■□□□□ 0.75
VEGFA-216ENST00000512683 MAST1Q9Y2H9 1570 aa19.71■□□□□ 0.75
VEGFA-216ENST00000512683 ILDR2Q71H61 639 aa19.71■□□□□ 0.75
VEGFA-216ENST00000512683 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
VEGFA-216ENST00000512683 UGGT1Q9NYU2 1555 aa19.69■□□□□ 0.74
VEGFA-216ENST00000512683 NPHP4O75161 1426 aaPredicted RBP19.68■□□□□ 0.74
VEGFA-216ENST00000512683 ARHGAP31Q2M1Z3 1444 aa19.66■□□□□ 0.74
VEGFA-216ENST00000512683 ABCC3O15438 1527 aa19.66■□□□□ 0.74
VEGFA-216ENST00000512683 DUOX2Q9NRD8 1548 aa19.66■□□□□ 0.74
VEGFA-216ENST00000512683 KIF15Q9NS87 1388 aa19.64■□□□□ 0.73
VEGFA-216ENST00000512683 SPATA31D1Q6ZQQ2 1576 aa19.64■□□□□ 0.73
VEGFA-216ENST00000512683 RNF17Q9BXT8 1623 aaKnown RBP19.64■□□□□ 0.73
VEGFA-216ENST00000512683 ERVK-7P63135 1459 aa19.63■□□□□ 0.73
VEGFA-216ENST00000512683 RRP7BPQ9NSQ0 103 aa19.63■□□□□ 0.73
VEGFA-216ENST00000512683 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
VEGFA-216ENST00000512683 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
VEGFA-216ENST00000512683 ABCC5O15440 1437 aa19.62■□□□□ 0.73
VEGFA-216ENST00000512683 ERBINQ96RT1 1412 aa19.62■□□□□ 0.73
VEGFA-216ENST00000512683 DEPDC5O75140 1603 aa19.62■□□□□ 0.73
VEGFA-216ENST00000512683 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
VEGFA-216ENST00000512683 KANK1Q14678 1352 aa19.6■□□□□ 0.73
VEGFA-216ENST00000512683 HSPA1LP34931 641 aa19.6■□□□□ 0.73
VEGFA-216ENST00000512683 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
VEGFA-216ENST00000512683 TXNDC2Q86VQ3 553 aa19.6■□□□□ 0.73
VEGFA-216ENST00000512683 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
VEGFA-216ENST00000512683 ANKRD30AQ9BXX3 1397 aa19.58■□□□□ 0.73
VEGFA-216ENST00000512683 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
VEGFA-216ENST00000512683 VWDEQ8N2E2 1590 aa19.57■□□□□ 0.72
VEGFA-216ENST00000512683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.722e-14■■■■□ 19.8
VEGFA-216ENST00000512683 LTKP29376 864 aa19.55■□□□□ 0.72
VEGFA-216ENST00000512683 DAPK1P53355 1430 aa19.55■□□□□ 0.72
VEGFA-216ENST00000512683 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
VEGFA-216ENST00000512683 STAG3Q9UJ98 1225 aa19.54■□□□□ 0.72
VEGFA-216ENST00000512683 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
VEGFA-216ENST00000512683 MROH1Q8NDA8 1641 aa19.53■□□□□ 0.72
VEGFA-216ENST00000512683 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-216ENST00000512683 ARHGAP23Q9P227 1491 aa19.53■□□□□ 0.72
VEGFA-216ENST00000512683 SLC52A1Q9NWF4 448 aa19.52■□□□□ 0.72
VEGFA-216ENST00000512683 SLIT1O75093 1534 aa19.51■□□□□ 0.71
VEGFA-216ENST00000512683 IDI1Q13907 227 aa19.51■□□□□ 0.71
VEGFA-216ENST00000512683 TMEM2Q9UHN6 1383 aa19.51■□□□□ 0.71
VEGFA-216ENST00000512683 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
VEGFA-216ENST00000512683 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
VEGFA-216ENST00000512683 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
VEGFA-216ENST00000512683 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
VEGFA-216ENST00000512683 LMTK2Q8IWU2 1503 aa19.48■□□□□ 0.71
VEGFA-216ENST00000512683 HDGFP51858 240 aaKnown RBP19.47■□□□□ 0.71
VEGFA-216ENST00000512683 IQGAP1P46940 1657 aa19.46■□□□□ 0.71
VEGFA-216ENST00000512683 KCNA6P17658 529 aa19.46■□□□□ 0.71
VEGFA-216ENST00000512683 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
VEGFA-216ENST00000512683 NOS1P29475 1434 aa19.42■□□□□ 0.7
VEGFA-216ENST00000512683 ADGRL2O95490 1459 aa19.42■□□□□ 0.7
VEGFA-216ENST00000512683 FAM50AQ14320 339 aaKnown RBP19.42■□□□□ 0.7
VEGFA-216ENST00000512683 UBR1Q8IWV7 1749 aa19.41■□□□□ 0.7
VEGFA-216ENST00000512683 ANKRD50Q9ULJ7 1429 aa19.4■□□□□ 0.7
VEGFA-216ENST00000512683 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-216ENST00000512683 FAM135BQ49AJ0 1406 aa19.39■□□□□ 0.69
VEGFA-216ENST00000512683 RPRD2Q5VT52 1461 aaKnown RBP19.39■□□□□ 0.69
VEGFA-216ENST00000512683 SYNMO15061 1565 aa19.39■□□□□ 0.69
VEGFA-216ENST00000512683 EFCAB6Q5THR3 1501 aa19.38■□□□□ 0.69
VEGFA-216ENST00000512683 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
VEGFA-216ENST00000512683 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-216ENST00000512683 CEP152O94986 1710 aa19.37■□□□□ 0.69
VEGFA-216ENST00000512683 SLC26A8Q96RN1 970 aa19.36■□□□□ 0.69
VEGFA-216ENST00000512683 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.69
VEGFA-216ENST00000512683 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
VEGFA-216ENST00000512683 TMEM94Q12767 1356 aa19.34■□□□□ 0.69
VEGFA-216ENST00000512683 MED1Q15648 1581 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-216ENST00000512683 TBX22Q9Y458 520 aa19.33■□□□□ 0.68
VEGFA-216ENST00000512683 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
VEGFA-216ENST00000512683 BCANQ96GW7 911 aa19.32■□□□□ 0.68
VEGFA-216ENST00000512683 PIK3C2BO00750 1634 aa19.31■□□□□ 0.68
VEGFA-216ENST00000512683 TET3O43151 1660 aa19.3■□□□□ 0.68
VEGFA-216ENST00000512683 CFAP65Q6ZU64 1925 aaKnown RBP19.3■□□□□ 0.68
VEGFA-216ENST00000512683 PLEKHG1Q9ULL1 1385 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms