RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 APLP2Q06481 763 aa17.63■□□□□ 0.41
UBE2B-208ENST00000511807 PKD2Q13563 968 aa17.63■□□□□ 0.41
UBE2B-208ENST00000511807 FBXO31Q5XUX0 539 aaPredicted RBP17.62■□□□□ 0.41
UBE2B-208ENST00000511807 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
UBE2B-208ENST00000511807 PLA2R1Q13018 1463 aa17.62■□□□□ 0.41
UBE2B-208ENST00000511807 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
UBE2B-208ENST00000511807 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
UBE2B-208ENST00000511807 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
UBE2B-208ENST00000511807 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
UBE2B-208ENST00000511807 KDM5DQ9BY66 1539 aa17.59■□□□□ 0.41
UBE2B-208ENST00000511807 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
UBE2B-208ENST00000511807 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
UBE2B-208ENST00000511807 TNRQ92752 1358 aa17.59■□□□□ 0.41
UBE2B-208ENST00000511807 PZPP20742 1482 aa17.56■□□□□ 0.4
UBE2B-208ENST00000511807 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
UBE2B-208ENST00000511807 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
UBE2B-208ENST00000511807 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
UBE2B-208ENST00000511807 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
UBE2B-208ENST00000511807 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
UBE2B-208ENST00000511807 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
UBE2B-208ENST00000511807 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
UBE2B-208ENST00000511807 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
UBE2B-208ENST00000511807 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
UBE2B-208ENST00000511807 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
UBE2B-208ENST00000511807 THEMISQ8N1K5 641 aaPredicted RBP17.5■□□□□ 0.39
UBE2B-208ENST00000511807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.5■□□□□ 0.39
UBE2B-208ENST00000511807 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
UBE2B-208ENST00000511807 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
UBE2B-208ENST00000511807 ABCC3O15438 1527 aa17.47■□□□□ 0.39
UBE2B-208ENST00000511807 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
UBE2B-208ENST00000511807 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
UBE2B-208ENST00000511807 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
UBE2B-208ENST00000511807 KIF15Q9NS87 1388 aa17.44■□□□□ 0.38
UBE2B-208ENST00000511807 RRP7BPQ9NSQ0 103 aa17.44■□□□□ 0.38
UBE2B-208ENST00000511807 EIF2AK4Q9P2K8 1649 aaKnown RBP17.43■□□□□ 0.38
UBE2B-208ENST00000511807 DUOX2Q9NRD8 1548 aa17.43■□□□□ 0.38
UBE2B-208ENST00000511807 ABCC5O15440 1437 aa17.42■□□□□ 0.38
UBE2B-208ENST00000511807 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
UBE2B-208ENST00000511807 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
UBE2B-208ENST00000511807 ERVK-7P63135 1459 aa17.42■□□□□ 0.38
UBE2B-208ENST00000511807 SHANK2Q9UPX8 1470 aa17.42■□□□□ 0.38
UBE2B-208ENST00000511807 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
UBE2B-208ENST00000511807 ZC3H13Q5T200 1668 aaKnown RBP17.42■□□□□ 0.38
UBE2B-208ENST00000511807 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
UBE2B-208ENST00000511807 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
UBE2B-208ENST00000511807 MROH1Q8NDA8 1641 aa17.41■□□□□ 0.38
UBE2B-208ENST00000511807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBE2B-208ENST00000511807 CPS1P31327 1500 aa17.4■□□□□ 0.38
UBE2B-208ENST00000511807 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.38
UBE2B-208ENST00000511807 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
UBE2B-208ENST00000511807 DAPK1P53355 1430 aa17.38■□□□□ 0.37
UBE2B-208ENST00000511807 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
UBE2B-208ENST00000511807 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
UBE2B-208ENST00000511807 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
UBE2B-208ENST00000511807 MED14O60244 1454 aa17.37■□□□□ 0.37
UBE2B-208ENST00000511807 TOM1O60784 492 aa17.37■□□□□ 0.37
UBE2B-208ENST00000511807 DEPDC5O75140 1603 aa17.36■□□□□ 0.37
UBE2B-208ENST00000511807 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
UBE2B-208ENST00000511807 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
UBE2B-208ENST00000511807 CEP152O94986 1710 aa17.35■□□□□ 0.37
UBE2B-208ENST00000511807 KANK1Q14678 1352 aa17.35■□□□□ 0.37
UBE2B-208ENST00000511807 PRDM15P57071 1507 aaPredicted RBP17.35■□□□□ 0.37
UBE2B-208ENST00000511807 ANKRD30AQ9BXX3 1397 aa17.34■□□□□ 0.37
UBE2B-208ENST00000511807 CROCC2H7BZ55 1655 aa17.33■□□□□ 0.37
UBE2B-208ENST00000511807 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
UBE2B-208ENST00000511807 HSPA1LP34931 641 aa17.32■□□□□ 0.36
UBE2B-208ENST00000511807 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
UBE2B-208ENST00000511807 TXNDC2Q86VQ3 553 aa17.31■□□□□ 0.36
UBE2B-208ENST00000511807 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
UBE2B-208ENST00000511807 SOCS7O14512 581 aa17.3■□□□□ 0.36
UBE2B-208ENST00000511807 LTKP29376 864 aa17.3■□□□□ 0.36
UBE2B-208ENST00000511807 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
UBE2B-208ENST00000511807 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
UBE2B-208ENST00000511807 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
UBE2B-208ENST00000511807 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
UBE2B-208ENST00000511807 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
UBE2B-208ENST00000511807 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
UBE2B-208ENST00000511807 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
UBE2B-208ENST00000511807 SLIT1O75093 1534 aa17.25■□□□□ 0.35
UBE2B-208ENST00000511807 IDI1Q13907 227 aa17.24■□□□□ 0.35
UBE2B-208ENST00000511807 LMTK2Q8IWU2 1503 aa17.24■□□□□ 0.35
UBE2B-208ENST00000511807 TMEM2Q9UHN6 1383 aa17.24■□□□□ 0.35
UBE2B-208ENST00000511807 CFAP65Q6ZU64 1925 aaKnown RBP17.23■□□□□ 0.35
UBE2B-208ENST00000511807 PIK3C2BO00750 1634 aa17.23■□□□□ 0.35
UBE2B-208ENST00000511807 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
UBE2B-208ENST00000511807 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
UBE2B-208ENST00000511807 SYNMO15061 1565 aa17.21■□□□□ 0.35
UBE2B-208ENST00000511807 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.34
UBE2B-208ENST00000511807 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
UBE2B-208ENST00000511807 ANKRD50Q9ULJ7 1429 aa17.2■□□□□ 0.34
UBE2B-208ENST00000511807 NOS1P29475 1434 aa17.19■□□□□ 0.34
UBE2B-208ENST00000511807 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
UBE2B-208ENST00000511807 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
UBE2B-208ENST00000511807 SLC52A1Q9NWF4 448 aa17.17■□□□□ 0.34
UBE2B-208ENST00000511807 BCANQ96GW7 911 aa17.16■□□□□ 0.34
UBE2B-208ENST00000511807 ADGRB3O60242 1522 aa17.14■□□□□ 0.33
UBE2B-208ENST00000511807 MSH5O43196 834 aa17.13■□□□□ 0.33
UBE2B-208ENST00000511807 KCNA6P17658 529 aa17.13■□□□□ 0.33
UBE2B-208ENST00000511807 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
UBE2B-208ENST00000511807 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms