RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 CPS1P31327 1500 aa21.48■■□□□ 1.03
POLR2J3-216ENST00000511773 TNRQ92752 1358 aa21.48■■□□□ 1.03
POLR2J3-216ENST00000511773 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
POLR2J3-216ENST00000511773 MBD5Q9P267 1494 aa21.46■■□□□ 1.03
POLR2J3-216ENST00000511773 SHANK2Q9UPX8 1470 aa21.46■■□□□ 1.03
POLR2J3-216ENST00000511773 TOM1O60784 492 aa21.46■■□□□ 1.03
POLR2J3-216ENST00000511773 DHX29Q7Z478 1369 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-216ENST00000511773 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
POLR2J3-216ENST00000511773 KIF3BO15066 747 aa21.43■■□□□ 1.02
POLR2J3-216ENST00000511773 PZPP20742 1482 aa21.43■■□□□ 1.02
POLR2J3-216ENST00000511773 EHBP1L1Q8N3D4 1523 aa21.43■■□□□ 1.02
POLR2J3-216ENST00000511773 RTEL1-TNFRSF6BF6WH68 1400 aa21.42■■□□□ 1.02
POLR2J3-216ENST00000511773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.02
POLR2J3-216ENST00000511773 VWDEQ8N2E2 1590 aa21.4■■□□□ 1.02
POLR2J3-216ENST00000511773 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
POLR2J3-216ENST00000511773 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
POLR2J3-216ENST00000511773 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
POLR2J3-216ENST00000511773 CCDC141Q6ZP82 1450 aa21.38■■□□□ 1.01
POLR2J3-216ENST00000511773 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
POLR2J3-216ENST00000511773 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
POLR2J3-216ENST00000511773 FAM135AQ9P2D6 1515 aa21.36■■□□□ 1.01
POLR2J3-216ENST00000511773 CAMSAP2Q08AD1 1489 aa21.36■■□□□ 1.01
POLR2J3-216ENST00000511773 NPHP4O75161 1426 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-216ENST00000511773 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
POLR2J3-216ENST00000511773 THEMISQ8N1K5 641 aaPredicted RBP21.35■■□□□ 1.01
POLR2J3-216ENST00000511773 ALKQ9UM73 1620 aa21.35■■□□□ 1.01
POLR2J3-216ENST00000511773 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
POLR2J3-216ENST00000511773 NLRP1Q9C000 1473 aa21.34■■□□□ 1.01
POLR2J3-216ENST00000511773 DEPDC5O75140 1603 aa21.34■■□□□ 1.01
POLR2J3-216ENST00000511773 MIA2Q96PC5 1412 aa21.34■■□□□ 1.01
POLR2J3-216ENST00000511773 MED14O60244 1454 aa21.32■■□□□ 1
POLR2J3-216ENST00000511773 STRCP1A6NGW2 1772 aa21.3■■□□□ 1
POLR2J3-216ENST00000511773 NCOA2Q15596 1464 aa21.29■■□□□ 1
POLR2J3-216ENST00000511773 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
POLR2J3-216ENST00000511773 LRRC7Q96NW7 1537 aa21.26■□□□□ 0.99
POLR2J3-216ENST00000511773 SYNMO15061 1565 aa21.26■□□□□ 0.99
POLR2J3-216ENST00000511773 ABCC3O15438 1527 aa21.24■□□□□ 0.99
POLR2J3-216ENST00000511773 ARHGEF5Q12774 1597 aa21.24■□□□□ 0.99
POLR2J3-216ENST00000511773 RSPH4AQ5TD94 716 aa21.23■□□□□ 0.99
POLR2J3-216ENST00000511773 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
POLR2J3-216ENST00000511773 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
POLR2J3-216ENST00000511773 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
POLR2J3-216ENST00000511773 ERVK-7P63135 1459 aa21.21■□□□□ 0.99
POLR2J3-216ENST00000511773 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-216ENST00000511773 CEP152O94986 1710 aa21.18■□□□□ 0.98
POLR2J3-216ENST00000511773 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
POLR2J3-216ENST00000511773 EIF2AK4Q9P2K8 1649 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-216ENST00000511773 SCAF11Q99590 1463 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-216ENST00000511773 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
POLR2J3-216ENST00000511773 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.98
POLR2J3-216ENST00000511773 XIRP1Q702N8 1843 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-216ENST00000511773 RGS17Q9UGC6 210 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-216ENST00000511773 LTKP29376 864 aa21.09■□□□□ 0.97
POLR2J3-216ENST00000511773 TXNDC2Q86VQ3 553 aa21.09■□□□□ 0.97
POLR2J3-216ENST00000511773 ARHGAP23Q9P227 1491 aa21.07■□□□□ 0.96
POLR2J3-216ENST00000511773 SLIT1O75093 1534 aa21.07■□□□□ 0.96
POLR2J3-216ENST00000511773 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
POLR2J3-216ENST00000511773 DUOX2Q9NRD8 1548 aa21.05■□□□□ 0.96
POLR2J3-216ENST00000511773 EID1Q9Y6B2 187 aa21.04■□□□□ 0.96
POLR2J3-216ENST00000511773 PIK3C2BO00750 1634 aa21.04■□□□□ 0.96
POLR2J3-216ENST00000511773 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
POLR2J3-216ENST00000511773 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
POLR2J3-216ENST00000511773 KIF15Q9NS87 1388 aa20.99■□□□□ 0.95
POLR2J3-216ENST00000511773 ARHGAP31Q2M1Z3 1444 aa20.99■□□□□ 0.95
POLR2J3-216ENST00000511773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
POLR2J3-216ENST00000511773 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
POLR2J3-216ENST00000511773 ROBO1Q9Y6N7 1651 aa20.99■□□□□ 0.95
POLR2J3-216ENST00000511773 TMEM94Q12767 1356 aa20.98■□□□□ 0.95
POLR2J3-216ENST00000511773 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
POLR2J3-216ENST00000511773 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
POLR2J3-216ENST00000511773 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
POLR2J3-216ENST00000511773 POTEAQ6S8J7 498 aa20.98■□□□□ 0.95
POLR2J3-216ENST00000511773 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
POLR2J3-216ENST00000511773 CROCC2H7BZ55 1655 aa20.97■□□□□ 0.95
POLR2J3-216ENST00000511773 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
POLR2J3-216ENST00000511773 RRP7BPQ9NSQ0 103 aa20.96■□□□□ 0.95
POLR2J3-216ENST00000511773 ERBINQ96RT1 1412 aa20.95■□□□□ 0.95
POLR2J3-216ENST00000511773 EFCAB6Q5THR3 1501 aa20.95■□□□□ 0.94
POLR2J3-216ENST00000511773 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
POLR2J3-216ENST00000511773 SLC26A8Q96RN1 970 aa20.93■□□□□ 0.94
POLR2J3-216ENST00000511773 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
POLR2J3-216ENST00000511773 PROSER2Q86WR7 435 aaPredicted RBP20.92■□□□□ 0.94
POLR2J3-216ENST00000511773 ABCC5O15440 1437 aa20.91■□□□□ 0.94
POLR2J3-216ENST00000511773 KCNA6P17658 529 aa20.91■□□□□ 0.94
POLR2J3-216ENST00000511773 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
POLR2J3-216ENST00000511773 KANK1Q14678 1352 aa20.91■□□□□ 0.94
POLR2J3-216ENST00000511773 IDI1Q13907 227 aa20.89■□□□□ 0.93
POLR2J3-216ENST00000511773 TET3O43151 1660 aa20.89■□□□□ 0.93
POLR2J3-216ENST00000511773 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
POLR2J3-216ENST00000511773 PHLPP1O60346 1717 aa20.87■□□□□ 0.93
POLR2J3-216ENST00000511773 BCANQ96GW7 911 aa20.87■□□□□ 0.93
POLR2J3-216ENST00000511773 NWD1Q149M9 1564 aa20.86■□□□□ 0.93
POLR2J3-216ENST00000511773 ADGRB3O60242 1522 aa20.86■□□□□ 0.93
POLR2J3-216ENST00000511773 NKTRP30414 1462 aaKnown RBP20.86■□□□□ 0.93
POLR2J3-216ENST00000511773 DAPK1P53355 1430 aa20.86■□□□□ 0.93
POLR2J3-216ENST00000511773 MSH6P52701 1360 aa20.85■□□□□ 0.93
POLR2J3-216ENST00000511773 LMTK2Q8IWU2 1503 aa20.84■□□□□ 0.93
POLR2J3-216ENST00000511773 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
POLR2J3-216ENST00000511773 SLAIN2Q9P270 581 aa20.81■□□□□ 0.92
POLR2J3-216ENST00000511773 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms