RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 ABCB7O75027 752 aa11.49□□□□□ -0.57
NR1I3-226ENST00000508740 PTPRMP28827 1452 aa11.49□□□□□ -0.57
NR1I3-226ENST00000508740 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
NR1I3-226ENST00000508740 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
NR1I3-226ENST00000508740 ANKRD50Q9ULJ7 1429 aa11.48□□□□□ -0.57
NR1I3-226ENST00000508740 NEO1Q92859 1461 aa11.48□□□□□ -0.57
NR1I3-226ENST00000508740 ADAMTSL3P82987 1691 aa11.48□□□□□ -0.57
NR1I3-226ENST00000508740 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
NR1I3-226ENST00000508740 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-226ENST00000508740 PPP1R15AO75807 674 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-226ENST00000508740 DIEXFQ68CQ4 756 aaKnown RBP11.47□□□□□ -0.57
NR1I3-226ENST00000508740 CROCC2H7BZ55 1655 aa11.46□□□□□ -0.57
NR1I3-226ENST00000508740 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.57
NR1I3-226ENST00000508740 KIF15Q9NS87 1388 aa11.46□□□□□ -0.57
NR1I3-226ENST00000508740 SYCP2Q9BX26 1530 aa11.45□□□□□ -0.58
NR1I3-226ENST00000508740 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
NR1I3-226ENST00000508740 TONSLQ96HA7 1378 aa11.44□□□□□ -0.58
NR1I3-226ENST00000508740 MYO5CQ9NQX4 1742 aa11.44□□□□□ -0.58
NR1I3-226ENST00000508740 ANKRD30BQ9BXX2 1392 aa11.43□□□□□ -0.58
NR1I3-226ENST00000508740 PZPP20742 1482 aa11.43□□□□□ -0.58
NR1I3-226ENST00000508740 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
NR1I3-226ENST00000508740 MAST1Q9Y2H9 1570 aa11.42□□□□□ -0.58
NR1I3-226ENST00000508740 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
NR1I3-226ENST00000508740 NUP155O75694 1391 aa11.41□□□□□ -0.58
NR1I3-226ENST00000508740 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
NR1I3-226ENST00000508740 ABCC1P33527 1531 aa11.4□□□□□ -0.58
NR1I3-226ENST00000508740 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
NR1I3-226ENST00000508740 PKD2Q13563 968 aa11.4□□□□□ -0.58
NR1I3-226ENST00000508740 AFAP1Q8N556 730 aa11.4□□□□□ -0.58
NR1I3-226ENST00000508740 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
NR1I3-226ENST00000508740 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-226ENST00000508740 CFAP74Q9C0B2 1584 aa11.39□□□□□ -0.59
NR1I3-226ENST00000508740 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
NR1I3-226ENST00000508740 FANCAO15360 1455 aa11.38□□□□□ -0.59
NR1I3-226ENST00000508740 DSG3P32926 999 aa11.38□□□□□ -0.59
NR1I3-226ENST00000508740 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
NR1I3-226ENST00000508740 RTEL1-TNFRSF6BF6WH68 1400 aa11.37□□□□□ -0.59
NR1I3-226ENST00000508740 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
NR1I3-226ENST00000508740 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
NR1I3-226ENST00000508740 KDM5DQ9BY66 1539 aa11.36□□□□□ -0.59
NR1I3-226ENST00000508740 MAGI2Q86UL8 1455 aa11.36□□□□□ -0.59
NR1I3-226ENST00000508740 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
NR1I3-226ENST00000508740 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
NR1I3-226ENST00000508740 RPRD2Q5VT52 1461 aaKnown RBP11.35□□□□□ -0.59
NR1I3-226ENST00000508740 PLXNC1O60486 1568 aa11.35□□□□□ -0.59
NR1I3-226ENST00000508740 FRMPD1Q5SYB0 1578 aa11.35□□□□□ -0.59
NR1I3-226ENST00000508740 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
NR1I3-226ENST00000508740 ERBINQ96RT1 1412 aa11.34□□□□□ -0.59
NR1I3-226ENST00000508740 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-226ENST00000508740 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
NR1I3-226ENST00000508740 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
NR1I3-226ENST00000508740 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
NR1I3-226ENST00000508740 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
NR1I3-226ENST00000508740 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
NR1I3-226ENST00000508740 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
NR1I3-226ENST00000508740 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
NR1I3-226ENST00000508740 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
NR1I3-226ENST00000508740 UNC13BO14795 1591 aa11.28□□□□□ -0.6
NR1I3-226ENST00000508740 ZNF518AQ6AHZ1 1483 aa11.27□□□□□ -0.6
NR1I3-226ENST00000508740 ATP7AQ04656 1500 aa11.27□□□□□ -0.61
NR1I3-226ENST00000508740 NBPF8Q3BBV2 869 aa11.27□□□□□ -0.61
NR1I3-226ENST00000508740 MIER1Q8N108 512 aa11.27□□□□□ -0.61
NR1I3-226ENST00000508740 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
NR1I3-226ENST00000508740 INO80Q9ULG1 1556 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-226ENST00000508740 PREX1Q8TCU6 1659 aa11.25□□□□□ -0.61
NR1I3-226ENST00000508740 KIF3BO15066 747 aa11.25□□□□□ -0.61
NR1I3-226ENST00000508740 HIRIP3Q9BW71 556 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-226ENST00000508740 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
NR1I3-226ENST00000508740 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
NR1I3-226ENST00000508740 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
NR1I3-226ENST00000508740 IQGAP3Q86VI3 1631 aa11.24□□□□□ -0.61
NR1I3-226ENST00000508740 HSPA2P54652 639 aa11.24□□□□□ -0.61
NR1I3-226ENST00000508740 SETD1BQ9UPS6 1966 aaKnown RBP11.24□□□□□ -0.61
NR1I3-226ENST00000508740 SOCS7O14512 581 aa11.23□□□□□ -0.61
NR1I3-226ENST00000508740 HSPA5P11021 654 aaKnown RBP11.23□□□□□ -0.61
NR1I3-226ENST00000508740 EIF4G2P78344 907 aaKnown RBP eCLIP11.23□□□□□ -0.61
NR1I3-226ENST00000508740 ATP10AO60312 1499 aa11.23□□□□□ -0.61
NR1I3-226ENST00000508740 CCDC144AA2RUR9 1427 aa11.22□□□□□ -0.61
NR1I3-226ENST00000508740 KANK1Q14678 1352 aa11.22□□□□□ -0.61
NR1I3-226ENST00000508740 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-226ENST00000508740 KDM5CP41229 1560 aa11.21□□□□□ -0.61
NR1I3-226ENST00000508740 A2MP01023 1474 aa11.21□□□□□ -0.61
NR1I3-226ENST00000508740 UHRF1BP1Q6BDS2 1440 aa11.21□□□□□ -0.61
NR1I3-226ENST00000508740 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
NR1I3-226ENST00000508740 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
NR1I3-226ENST00000508740 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
NR1I3-226ENST00000508740 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
NR1I3-226ENST00000508740 DCAF11Q8TEB1 546 aa11.19□□□□□ -0.62
NR1I3-226ENST00000508740 PTPRTO14522 1441 aa11.18□□□□□ -0.62
NR1I3-226ENST00000508740 DEPDC5O75140 1603 aa11.18□□□□□ -0.62
NR1I3-226ENST00000508740 ZNF326Q5BKZ1 582 aaKnown RBP11.18□□□□□ -0.62
NR1I3-226ENST00000508740 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
NR1I3-226ENST00000508740 VWDEQ8N2E2 1590 aa11.18□□□□□ -0.62
NR1I3-226ENST00000508740 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
NR1I3-226ENST00000508740 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
NR1I3-226ENST00000508740 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
NR1I3-226ENST00000508740 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
NR1I3-226ENST00000508740 MLECQ14165 292 aa11.16□□□□□ -0.62
NR1I3-226ENST00000508740 SIGLEC1Q9BZZ2 1709 aa11.15□□□□□ -0.62
NR1I3-226ENST00000508740 PRDM15P57071 1507 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms