RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.13
PDLIM5-209ENST00000506632 CROCC2H7BZ55 1655 aa14.21□□□□□ -0.13
PDLIM5-209ENST00000506632 RNF17Q9BXT8 1623 aaKnown RBP14.21□□□□□ -0.13
PDLIM5-209ENST00000506632 ABCC5O15440 1437 aa14.21□□□□□ -0.13
PDLIM5-209ENST00000506632 EIF2AK4Q9P2K8 1649 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-209ENST00000506632 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-209ENST00000506632 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
PDLIM5-209ENST00000506632 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
PDLIM5-209ENST00000506632 DAPK1P53355 1430 aa14.18□□□□□ -0.14
PDLIM5-209ENST00000506632 PZPP20742 1482 aa14.18□□□□□ -0.14
PDLIM5-209ENST00000506632 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
PDLIM5-209ENST00000506632 DUOX2Q9NRD8 1548 aa14.17□□□□□ -0.14
PDLIM5-209ENST00000506632 MROH1Q8NDA8 1641 aa14.17□□□□□ -0.14
PDLIM5-209ENST00000506632 CEP170BQ9Y4F5 1589 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-209ENST00000506632 PTPRTO14522 1441 aa14.15□□□□□ -0.14
PDLIM5-209ENST00000506632 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
PDLIM5-209ENST00000506632 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
PDLIM5-209ENST00000506632 ABCC3O15438 1527 aa14.15□□□□□ -0.14
PDLIM5-209ENST00000506632 WASHC2CQ9Y4E1 1318 aa14.15□□□□□ -0.15
PDLIM5-209ENST00000506632 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-209ENST00000506632 KIF15Q9NS87 1388 aa14.14□□□□□ -0.15
PDLIM5-209ENST00000506632 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
PDLIM5-209ENST00000506632 A2ML1A8K2U0 1454 aa14.13□□□□□ -0.15
PDLIM5-209ENST00000506632 PLA2R1Q13018 1463 aa14.13□□□□□ -0.15
PDLIM5-209ENST00000506632 PRDM15P57071 1507 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-209ENST00000506632 FBXO31Q5XUX0 539 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-209ENST00000506632 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
PDLIM5-209ENST00000506632 TNRQ92752 1358 aa14.11□□□□□ -0.15
PDLIM5-209ENST00000506632 ADGRL2O95490 1459 aa14.11□□□□□ -0.15
PDLIM5-209ENST00000506632 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
PDLIM5-209ENST00000506632 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
PDLIM5-209ENST00000506632 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
PDLIM5-209ENST00000506632 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
PDLIM5-209ENST00000506632 CEP152O94986 1710 aa14.09□□□□□ -0.15
PDLIM5-209ENST00000506632 NLRP1Q9C000 1473 aa14.08□□□□□ -0.16
PDLIM5-209ENST00000506632 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
PDLIM5-209ENST00000506632 ARHGAP31Q2M1Z3 1444 aa14.07□□□□□ -0.16
PDLIM5-209ENST00000506632 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
PDLIM5-209ENST00000506632 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
PDLIM5-209ENST00000506632 LTBP4Q8N2S1 1624 aa14.06□□□□□ -0.16
PDLIM5-209ENST00000506632 PKD2Q13563 968 aa14.06□□□□□ -0.16
PDLIM5-209ENST00000506632 CHIC2Q9UKJ5 165 aa14.06□□□□□ -0.16
PDLIM5-209ENST00000506632 NCKAP5LQ9HCH0 1330 aa14.06□□□□□ -0.16
PDLIM5-209ENST00000506632 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-209ENST00000506632 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
PDLIM5-209ENST00000506632 NEURL4Q96JN8 1562 aa14.03□□□□□ -0.16
PDLIM5-209ENST00000506632 UGGT1Q9NYU2 1555 aa14.03□□□□□ -0.16
PDLIM5-209ENST00000506632 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-209ENST00000506632 ANKRD50Q9ULJ7 1429 aa14□□□□□ -0.17
PDLIM5-209ENST00000506632 KANK1Q14678 1352 aa14□□□□□ -0.17
PDLIM5-209ENST00000506632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
PDLIM5-209ENST00000506632 THEMISQ8N1K5 641 aaPredicted RBP14□□□□□ -0.17
PDLIM5-209ENST00000506632 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
PDLIM5-209ENST00000506632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■□□□□ 11
PDLIM5-209ENST00000506632 CFAP65Q6ZU64 1925 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-209ENST00000506632 MED14O60244 1454 aa13.99□□□□□ -0.17
PDLIM5-209ENST00000506632 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
PDLIM5-209ENST00000506632 EFCAB6Q5THR3 1501 aa13.98□□□□□ -0.17
PDLIM5-209ENST00000506632 UBR1Q8IWV7 1749 aa13.98□□□□□ -0.17
PDLIM5-209ENST00000506632 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-209ENST00000506632 ADRA2BP18089 450 aa13.97□□□□□ -0.17
PDLIM5-209ENST00000506632 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
PDLIM5-209ENST00000506632 UNC13BO14795 1591 aa13.96□□□□□ -0.18
PDLIM5-209ENST00000506632 ARHGAP23Q9P227 1491 aa13.95□□□□□ -0.18
PDLIM5-209ENST00000506632 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-209ENST00000506632 NOS1P29475 1434 aa13.95□□□□□ -0.18
PDLIM5-209ENST00000506632 SYNMO15061 1565 aa13.94□□□□□ -0.18
PDLIM5-209ENST00000506632 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-209ENST00000506632 SLIT1O75093 1534 aa13.94□□□□□ -0.18
PDLIM5-209ENST00000506632 NPHP4O75161 1426 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-209ENST00000506632 KCNA4P22459 653 aa13.93□□□□□ -0.18
PDLIM5-209ENST00000506632 KDM5AP29375 1690 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-209ENST00000506632 PIK3C2BO00750 1634 aa13.93□□□□□ -0.18
PDLIM5-209ENST00000506632 RPRD2Q5VT52 1461 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-209ENST00000506632 TET3O43151 1660 aa13.92□□□□□ -0.18
PDLIM5-209ENST00000506632 IQGAP1P46940 1657 aa13.92□□□□□ -0.18
PDLIM5-209ENST00000506632 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-209ENST00000506632 GCC2Q8IWJ2 1684 aa13.9□□□□□ -0.18
PDLIM5-209ENST00000506632 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.19
PDLIM5-209ENST00000506632 CPS1P31327 1500 aa13.9□□□□□ -0.19
PDLIM5-209ENST00000506632 IDI1Q13907 227 aa13.89□□□□□ -0.19
PDLIM5-209ENST00000506632 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
PDLIM5-209ENST00000506632 LTKP29376 864 aa13.88□□□□□ -0.19
PDLIM5-209ENST00000506632 ADGRB3O60242 1522 aa13.87□□□□□ -0.19
PDLIM5-209ENST00000506632 ITGAEP38570 1179 aa13.87□□□□□ -0.19
PDLIM5-209ENST00000506632 E9PCH4 1651 aa13.87□□□□□ -0.19
PDLIM5-209ENST00000506632 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
PDLIM5-209ENST00000506632 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
PDLIM5-209ENST00000506632 STRCP1A6NGW2 1772 aa13.85□□□□□ -0.19
PDLIM5-209ENST00000506632 NUP155O75694 1391 aa13.83□□□□□ -0.19
PDLIM5-209ENST00000506632 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
PDLIM5-209ENST00000506632 EID1Q9Y6B2 187 aa13.83□□□□□ -0.2
PDLIM5-209ENST00000506632 NAIPQ13075 1403 aa13.82□□□□□ -0.2
PDLIM5-209ENST00000506632 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
PDLIM5-209ENST00000506632 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
PDLIM5-209ENST00000506632 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
PDLIM5-209ENST00000506632 UBAP1LF5GYI3 381 aa13.8□□□□□ -0.2
PDLIM5-209ENST00000506632 MYO5BQ9ULV0 1848 aa13.8□□□□□ -0.2
PDLIM5-209ENST00000506632 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
PDLIM5-209ENST00000506632 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms