RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ABCC5O15440 1437 aa22.5■■□□□ 1.19
CDC42SE2-209ENST00000506419 MAST1Q9Y2H9 1570 aa22.5■■□□□ 1.19
CDC42SE2-209ENST00000506419 CAMSAP1Q5T5Y3 1602 aa22.49■■□□□ 1.19
CDC42SE2-209ENST00000506419 RRP7BPQ9NSQ0 103 aa22.48■■□□□ 1.19
CDC42SE2-209ENST00000506419 TNRQ92752 1358 aa22.47■■□□□ 1.19
CDC42SE2-209ENST00000506419 PKD2Q13563 968 aa22.46■■□□□ 1.19
CDC42SE2-209ENST00000506419 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
CDC42SE2-209ENST00000506419 PZPP20742 1482 aa22.45■■□□□ 1.18
CDC42SE2-209ENST00000506419 KDM5DQ9BY66 1539 aa22.45■■□□□ 1.18
CDC42SE2-209ENST00000506419 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
CDC42SE2-209ENST00000506419 CEP170BQ9Y4F5 1589 aaPredicted RBP22.42■■□□□ 1.18
CDC42SE2-209ENST00000506419 A2ML1A8K2U0 1454 aa22.42■■□□□ 1.18
CDC42SE2-209ENST00000506419 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
CDC42SE2-209ENST00000506419 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
CDC42SE2-209ENST00000506419 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
CDC42SE2-209ENST00000506419 KIF15Q9NS87 1388 aa22.41■■□□□ 1.18
CDC42SE2-209ENST00000506419 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
CDC42SE2-209ENST00000506419 DAPK1P53355 1430 aa22.4■■□□□ 1.18
CDC42SE2-209ENST00000506419 FAM135AQ9P2D6 1515 aa22.4■■□□□ 1.18
CDC42SE2-209ENST00000506419 LTBP4Q8N2S1 1624 aa22.39■■□□□ 1.17
CDC42SE2-209ENST00000506419 ZNF335Q9H4Z2 1342 aaPredicted RBP22.38■■□□□ 1.17
CDC42SE2-209ENST00000506419 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
CDC42SE2-209ENST00000506419 ABCC3O15438 1527 aa22.37■■□□□ 1.17
CDC42SE2-209ENST00000506419 ZNF142P52746 1687 aaPredicted RBP22.37■■□□□ 1.17
CDC42SE2-209ENST00000506419 DNMT1P26358 1616 aaKnown RBP22.37■■□□□ 1.17
CDC42SE2-209ENST00000506419 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
CDC42SE2-209ENST00000506419 RNF17Q9BXT8 1623 aaKnown RBP22.36■■□□□ 1.17
CDC42SE2-209ENST00000506419 THEMISQ8N1K5 641 aaPredicted RBP22.36■■□□□ 1.17
CDC42SE2-209ENST00000506419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.171e-6■■■■□ 21
CDC42SE2-209ENST00000506419 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
CDC42SE2-209ENST00000506419 MROH1Q8NDA8 1641 aa22.35■■□□□ 1.17
CDC42SE2-209ENST00000506419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDC42SE2-209ENST00000506419 EIF2AK4Q9P2K8 1649 aaKnown RBP22.32■■□□□ 1.16
CDC42SE2-209ENST00000506419 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
CDC42SE2-209ENST00000506419 ANKRD30AQ9BXX3 1397 aa22.32■■□□□ 1.16
CDC42SE2-209ENST00000506419 ERBINQ96RT1 1412 aa22.31■■□□□ 1.16
CDC42SE2-209ENST00000506419 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
CDC42SE2-209ENST00000506419 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
CDC42SE2-209ENST00000506419 PPARGC1BQ86YN6 1023 aaKnown RBP22.28■■□□□ 1.16
CDC42SE2-209ENST00000506419 SPATA31D1Q6ZQQ2 1576 aa22.27■■□□□ 1.16
CDC42SE2-209ENST00000506419 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
CDC42SE2-209ENST00000506419 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
CDC42SE2-209ENST00000506419 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
CDC42SE2-209ENST00000506419 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
CDC42SE2-209ENST00000506419 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
CDC42SE2-209ENST00000506419 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
CDC42SE2-209ENST00000506419 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
CDC42SE2-209ENST00000506419 CEP152O94986 1710 aa22.21■■□□□ 1.15
CDC42SE2-209ENST00000506419 KANK1Q14678 1352 aa22.21■■□□□ 1.15
CDC42SE2-209ENST00000506419 IQSEC2Q5JU85 1478 aa22.21■■□□□ 1.15
CDC42SE2-209ENST00000506419 LTKP29376 864 aa22.19■■□□□ 1.14
CDC42SE2-209ENST00000506419 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
CDC42SE2-209ENST00000506419 MED14O60244 1454 aa22.19■■□□□ 1.14
CDC42SE2-209ENST00000506419 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
CDC42SE2-209ENST00000506419 UBAP1LF5GYI3 381 aa22.18■■□□□ 1.14
CDC42SE2-209ENST00000506419 IDI1Q13907 227 aa22.18■■□□□ 1.14
CDC42SE2-209ENST00000506419 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
CDC42SE2-209ENST00000506419 ANKRD50Q9ULJ7 1429 aa22.16■■□□□ 1.14
CDC42SE2-209ENST00000506419 TXNDC2Q86VQ3 553 aa22.16■■□□□ 1.14
CDC42SE2-209ENST00000506419 VWDEQ8N2E2 1590 aa22.16■■□□□ 1.14
CDC42SE2-209ENST00000506419 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
CDC42SE2-209ENST00000506419 ITGAEP38570 1179 aa22.12■■□□□ 1.13
CDC42SE2-209ENST00000506419 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
CDC42SE2-209ENST00000506419 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
CDC42SE2-209ENST00000506419 NOS1P29475 1434 aa22.09■■□□□ 1.13
CDC42SE2-209ENST00000506419 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
CDC42SE2-209ENST00000506419 ROCK1Q13464 1354 aa22.08■■□□□ 1.12
CDC42SE2-209ENST00000506419 UBR1Q8IWV7 1749 aa22.08■■□□□ 1.12
CDC42SE2-209ENST00000506419 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
CDC42SE2-209ENST00000506419 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
CDC42SE2-209ENST00000506419 SLIT1O75093 1534 aa22.06■■□□□ 1.12
CDC42SE2-209ENST00000506419 SLC52A1Q9NWF4 448 aa22.06■■□□□ 1.12
CDC42SE2-209ENST00000506419 SCAF11Q99590 1463 aaKnown RBP22.06■■□□□ 1.12
CDC42SE2-209ENST00000506419 CPS1P31327 1500 aa22.06■■□□□ 1.12
CDC42SE2-209ENST00000506419 EFCAB6Q5THR3 1501 aa22.03■■□□□ 1.12
CDC42SE2-209ENST00000506419 TOM1O60784 492 aa22.03■■□□□ 1.12
CDC42SE2-209ENST00000506419 SYNMO15061 1565 aa22.03■■□□□ 1.12
CDC42SE2-209ENST00000506419 PIK3C2BO00750 1634 aa22.02■■□□□ 1.12
CDC42SE2-209ENST00000506419 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
CDC42SE2-209ENST00000506419 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
CDC42SE2-209ENST00000506419 LRRC7Q96NW7 1537 aa21.98■■□□□ 1.11
CDC42SE2-209ENST00000506419 SLC26A8Q96RN1 970 aa21.98■■□□□ 1.11
CDC42SE2-209ENST00000506419 NUP155O75694 1391 aa21.98■■□□□ 1.11
CDC42SE2-209ENST00000506419 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
CDC42SE2-209ENST00000506419 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
CDC42SE2-209ENST00000506419 HSPA1LP34931 641 aa21.96■■□□□ 1.11
CDC42SE2-209ENST00000506419 STRCP1A6NGW2 1772 aa21.96■■□□□ 1.11
CDC42SE2-209ENST00000506419 DISP3Q9P2K9 1392 aa21.96■■□□□ 1.11
CDC42SE2-209ENST00000506419 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
CDC42SE2-209ENST00000506419 ILDR2Q71H61 639 aa21.93■■□□□ 1.1
CDC42SE2-209ENST00000506419 UNC13BO14795 1591 aa21.92■■□□□ 1.1
CDC42SE2-209ENST00000506419 RRBP1Q9P2E9 1410 aaKnown RBP21.92■■□□□ 1.1
CDC42SE2-209ENST00000506419 KCNA6P17658 529 aa21.92■■□□□ 1.1
CDC42SE2-209ENST00000506419 ALKQ9UM73 1620 aa21.91■■□□□ 1.1
CDC42SE2-209ENST00000506419 CHGAP10645 457 aaKnown RBP21.91■■□□□ 1.1
CDC42SE2-209ENST00000506419 TET3O43151 1660 aa21.91■■□□□ 1.1
CDC42SE2-209ENST00000506419 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
CDC42SE2-209ENST00000506419 KDM5AP29375 1690 aaKnown RBP21.89■■□□□ 1.1
CDC42SE2-209ENST00000506419 BCANQ96GW7 911 aa21.89■■□□□ 1.09
CDC42SE2-209ENST00000506419 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms