RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
ARHGEF28-207ENST00000506334 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
ARHGEF28-207ENST00000506334 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
ARHGEF28-207ENST00000506334 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
ARHGEF28-207ENST00000506334 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.35
ARHGEF28-207ENST00000506334 CASKIN1Q8WXD9 1431 aa12.83□□□□□ -0.36
ARHGEF28-207ENST00000506334 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
ARHGEF28-207ENST00000506334 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
ARHGEF28-207ENST00000506334 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
ARHGEF28-207ENST00000506334 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
ARHGEF28-207ENST00000506334 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF28-207ENST00000506334 A2MP01023 1474 aa12.8□□□□□ -0.36
ARHGEF28-207ENST00000506334 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
ARHGEF28-207ENST00000506334 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 CEP170BQ9Y4F5 1589 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.36
ARHGEF28-207ENST00000506334 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.36
ARHGEF28-207ENST00000506334 CPS1P31327 1500 aa12.77□□□□□ -0.37
ARHGEF28-207ENST00000506334 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF28-207ENST00000506334 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
ARHGEF28-207ENST00000506334 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
ARHGEF28-207ENST00000506334 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
ARHGEF28-207ENST00000506334 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
ARHGEF28-207ENST00000506334 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF28-207ENST00000506334 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
ARHGEF28-207ENST00000506334 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
ARHGEF28-207ENST00000506334 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 TNRQ92752 1358 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 KIF3BO15066 747 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.71□□□□□ -0.37
ARHGEF28-207ENST00000506334 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
ARHGEF28-207ENST00000506334 FYCO1Q9BQS8 1478 aa12.71□□□□□ -0.38
ARHGEF28-207ENST00000506334 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF28-207ENST00000506334 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF28-207ENST00000506334 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
ARHGEF28-207ENST00000506334 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF28-207ENST00000506334 MED14O60244 1454 aa12.68□□□□□ -0.38
ARHGEF28-207ENST00000506334 ADGBQ8N7X0 1667 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 ZBTB22O15209 634 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 PZPP20742 1482 aa12.66□□□□□ -0.38
ARHGEF28-207ENST00000506334 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
ARHGEF28-207ENST00000506334 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
ARHGEF28-207ENST00000506334 VWDEQ8N2E2 1590 aa12.65□□□□□ -0.38
ARHGEF28-207ENST00000506334 RGS17Q9UGC6 210 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF28-207ENST00000506334 FAM135AQ9P2D6 1515 aa12.64□□□□□ -0.39
ARHGEF28-207ENST00000506334 POLR1AO95602 1720 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF28-207ENST00000506334 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
ARHGEF28-207ENST00000506334 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
ARHGEF28-207ENST00000506334 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
ARHGEF28-207ENST00000506334 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
ARHGEF28-207ENST00000506334 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
ARHGEF28-207ENST00000506334 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
ARHGEF28-207ENST00000506334 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
ARHGEF28-207ENST00000506334 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
ARHGEF28-207ENST00000506334 TXNDC2Q86VQ3 553 aa12.57□□□□□ -0.4
ARHGEF28-207ENST00000506334 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
ARHGEF28-207ENST00000506334 LTKP29376 864 aa12.56□□□□□ -0.4
ARHGEF28-207ENST00000506334 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
ARHGEF28-207ENST00000506334 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
ARHGEF28-207ENST00000506334 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
ARHGEF28-207ENST00000506334 IQGAP1P46940 1657 aa12.55□□□□□ -0.4
ARHGEF28-207ENST00000506334 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
ARHGEF28-207ENST00000506334 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
ARHGEF28-207ENST00000506334 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.4
ARHGEF28-207ENST00000506334 RNF17Q9BXT8 1623 aaKnown RBP12.52□□□□□ -0.4
ARHGEF28-207ENST00000506334 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF28-207ENST00000506334 CAMSAP2Q08AD1 1489 aa12.51□□□□□ -0.41
ARHGEF28-207ENST00000506334 SCAF11Q99590 1463 aaKnown RBP12.51□□□□□ -0.41
ARHGEF28-207ENST00000506334 SYNMO15061 1565 aa12.51□□□□□ -0.41
ARHGEF28-207ENST00000506334 KCNA6P17658 529 aa12.5□□□□□ -0.41
ARHGEF28-207ENST00000506334 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
ARHGEF28-207ENST00000506334 ABCC3O15438 1527 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 ARHGAP23Q9P227 1491 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 PROSER2Q86WR7 435 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 ARHGEF5Q12774 1597 aa12.47□□□□□ -0.41
ARHGEF28-207ENST00000506334 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
ARHGEF28-207ENST00000506334 SLIT1O75093 1534 aa12.47□□□□□ -0.41
ARHGEF28-207ENST00000506334 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
ARHGEF28-207ENST00000506334 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms