RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 FAM135AQ9P2D6 1515 aa38.9■■■■□ 3.82
HERC4-212ENST00000505760 NCKAP5LQ9HCH0 1330 aa38.89■■■■□ 3.82
HERC4-212ENST00000505760 WASHC2CQ9Y4E1 1318 aa38.89■■■■□ 3.82
HERC4-212ENST00000505760 MIA2Q96PC5 1412 aa38.88■■■■□ 3.81
HERC4-212ENST00000505760 PLA2R1Q13018 1463 aa38.87■■■■□ 3.81
HERC4-212ENST00000505760 MAST1Q9Y2H9 1570 aa38.86■■■■□ 3.81
HERC4-212ENST00000505760 APLP2Q06481 763 aa38.84■■■■□ 3.81
HERC4-212ENST00000505760 PKD2Q13563 968 aa38.84■■■■□ 3.81
HERC4-212ENST00000505760 LTBP4Q8N2S1 1624 aa38.84■■■■□ 3.81
HERC4-212ENST00000505760 A2ML1A8K2U0 1454 aa38.84■■■■□ 3.81
HERC4-212ENST00000505760 PZPP20742 1482 aa38.83■■■■□ 3.81
HERC4-212ENST00000505760 FBXO31Q5XUX0 539 aaPredicted RBP38.81■■■■□ 3.8
HERC4-212ENST00000505760 TNRQ92752 1358 aa38.81■■■■□ 3.8
HERC4-212ENST00000505760 TCOF1Q13428 1488 aaKnown RBP38.79■■■■□ 3.8
HERC4-212ENST00000505760 DNMT1P26358 1616 aaKnown RBP38.78■■■■□ 3.8
HERC4-212ENST00000505760 RNF17Q9BXT8 1623 aaKnown RBP38.75■■■■□ 3.79
HERC4-212ENST00000505760 EIF2AK4Q9P2K8 1649 aaKnown RBP38.72■■■■□ 3.79
HERC4-212ENST00000505760 IQSEC2Q5JU85 1478 aa38.7■■■■□ 3.79
HERC4-212ENST00000505760 ZNF335Q9H4Z2 1342 aaPredicted RBP38.69■■■■□ 3.78
HERC4-212ENST00000505760 ZC3H13Q5T200 1668 aaKnown RBP38.68■■■■□ 3.78
HERC4-212ENST00000505760 PTPN23Q9H3S7 1636 aa38.66■■■■□ 3.78
HERC4-212ENST00000505760 ABCC3O15438 1527 aa38.65■■■■□ 3.78
HERC4-212ENST00000505760 DUOX2Q9NRD8 1548 aa38.64■■■■□ 3.78
HERC4-212ENST00000505760 POLR1AO95602 1720 aaPredicted RBP38.64■■■■□ 3.78
HERC4-212ENST00000505760 NLRP1Q9C000 1473 aa38.63■■■■□ 3.77
HERC4-212ENST00000505760 CROCC2H7BZ55 1655 aa38.62■■■■□ 3.77
HERC4-212ENST00000505760 SHANK2Q9UPX8 1470 aa38.6■■■■□ 3.77
HERC4-212ENST00000505760 ABCC5O15440 1437 aa38.58■■■■□ 3.77
HERC4-212ENST00000505760 THEMISQ8N1K5 641 aaPredicted RBP38.58■■■■□ 3.77
HERC4-212ENST00000505760 MROH1Q8NDA8 1641 aa38.58■■■■□ 3.77
HERC4-212ENST00000505760 KIF15Q9NS87 1388 aa38.57■■■■□ 3.77
HERC4-212ENST00000505760 UGGT1Q9NYU2 1555 aa38.57■■■■□ 3.77
HERC4-212ENST00000505760 CEP152O94986 1710 aa38.56■■■■□ 3.76
HERC4-212ENST00000505760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.56■■■■□ 3.761e-7■■■■□ 19.9
HERC4-212ENST00000505760 FGD6Q6ZV73 1430 aa38.55■■■■□ 3.76
HERC4-212ENST00000505760 NEURL4Q96JN8 1562 aa38.54■■■■□ 3.76
HERC4-212ENST00000505760 ANKLE2Q86XL3 938 aa38.54■■■■□ 3.76
HERC4-212ENST00000505760 RRP7BPQ9NSQ0 103 aa38.54■■■■□ 3.76
HERC4-212ENST00000505760 SPATA31D1Q6ZQQ2 1576 aa38.53■■■■□ 3.76
HERC4-212ENST00000505760 DAPK1P53355 1430 aa38.52■■■■□ 3.76
HERC4-212ENST00000505760 CFAP65Q6ZU64 1925 aaKnown RBP38.51■■■■□ 3.76
HERC4-212ENST00000505760 ERBINQ96RT1 1412 aa38.5■■■■□ 3.75
HERC4-212ENST00000505760 ERVK-7P63135 1459 aa38.49■■■■□ 3.75
HERC4-212ENST00000505760 PRDM15P57071 1507 aaPredicted RBP38.45■■■■□ 3.75
HERC4-212ENST00000505760 UBAP1LF5GYI3 381 aa38.44■■■■□ 3.74
HERC4-212ENST00000505760 DEPDC5O75140 1603 aa38.42■■■■□ 3.74
HERC4-212ENST00000505760 CHIC2Q9UKJ5 165 aa38.41■■■■□ 3.74
HERC4-212ENST00000505760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.4■■■■□ 3.74
HERC4-212ENST00000505760 ANKRD30AQ9BXX3 1397 aa38.4■■■■□ 3.74
HERC4-212ENST00000505760 NPHP4O75161 1426 aaPredicted RBP38.38■■■■□ 3.74
HERC4-212ENST00000505760 MED14O60244 1454 aa38.38■■■■□ 3.73
HERC4-212ENST00000505760 CPS1P31327 1500 aa38.37■■■■□ 3.73
HERC4-212ENST00000505760 ARHGAP31Q2M1Z3 1444 aa38.36■■■■□ 3.73
HERC4-212ENST00000505760 KANK1Q14678 1352 aa38.35■■■■□ 3.73
HERC4-212ENST00000505760 IQGAP1P46940 1657 aa38.34■■■■□ 3.73
HERC4-212ENST00000505760 DISP3Q9P2K9 1392 aa38.33■■■■□ 3.73
HERC4-212ENST00000505760 UBR1Q8IWV7 1749 aa38.32■■■■□ 3.73
HERC4-212ENST00000505760 VWDEQ8N2E2 1590 aa38.3■■■■□ 3.72
HERC4-212ENST00000505760 FAM50AQ14320 339 aaKnown RBP38.29■■■■□ 3.72
HERC4-212ENST00000505760 ADGRL2O95490 1459 aa38.22■■■■□ 3.71
HERC4-212ENST00000505760 LMTK2Q8IWU2 1503 aa38.2■■■■□ 3.71
HERC4-212ENST00000505760 SCAF11Q99590 1463 aaKnown RBP38.2■■■■□ 3.71
HERC4-212ENST00000505760 SCAF1Q9H7N4 1312 aaKnown RBP38.19■■■■□ 3.7
HERC4-212ENST00000505760 TOM1O60784 492 aa38.19■■■■□ 3.7
HERC4-212ENST00000505760 PIK3C2BO00750 1634 aa38.16■■■■□ 3.7
HERC4-212ENST00000505760 SLIT1O75093 1534 aa38.16■■■■□ 3.7
HERC4-212ENST00000505760 ARHGAP23Q9P227 1491 aa38.15■■■■□ 3.7
HERC4-212ENST00000505760 PIP4K2BP78356 416 aa38.15■■■■□ 3.7
HERC4-212ENST00000505760 TXNDC2Q86VQ3 553 aa38.15■■■■□ 3.7
HERC4-212ENST00000505760 STAG3Q9UJ98 1225 aa38.15■■■■□ 3.7
HERC4-212ENST00000505760 EID1Q9Y6B2 187 aa38.13■■■■□ 3.69
HERC4-212ENST00000505760 STRCP1A6NGW2 1772 aa38.12■■■■□ 3.69
HERC4-212ENST00000505760 LTKP29376 864 aa38.12■■■■□ 3.69
HERC4-212ENST00000505760 EFCAB6Q5THR3 1501 aa38.11■■■■□ 3.69
HERC4-212ENST00000505760 ANKRD50Q9ULJ7 1429 aa38.1■■■■□ 3.69
HERC4-212ENST00000505760 KDM5AP29375 1690 aaKnown RBP38.07■■■■□ 3.68
HERC4-212ENST00000505760 IDI1Q13907 227 aa38.06■■■■□ 3.68
HERC4-212ENST00000505760 SYNMO15061 1565 aa38.06■■■■□ 3.68
HERC4-212ENST00000505760 TMEM2Q9UHN6 1383 aa38.06■■■■□ 3.68
HERC4-212ENST00000505760 ILDR2Q71H61 639 aa38.05■■■■□ 3.68
HERC4-212ENST00000505760 LRRC7Q96NW7 1537 aa38.04■■■■□ 3.68
HERC4-212ENST00000505760 NOS1P29475 1434 aa38.02■■■■□ 3.68
HERC4-212ENST00000505760 HSPA1LP34931 641 aa38.01■■■■□ 3.68
HERC4-212ENST00000505760 RPRD2Q5VT52 1461 aaKnown RBP37.96■■■■□ 3.67
HERC4-212ENST00000505760 SLC52A1Q9NWF4 448 aa37.96■■■■□ 3.67
HERC4-212ENST00000505760 ALKQ9UM73 1620 aa37.94■■■■□ 3.66
HERC4-212ENST00000505760 ADGRB3O60242 1522 aa37.94■■■■□ 3.66
HERC4-212ENST00000505760 TET3O43151 1660 aa37.94■■■■□ 3.66
HERC4-212ENST00000505760 UNC13BO14795 1591 aa37.89■■■■□ 3.66
HERC4-212ENST00000505760 ROCK1Q13464 1354 aa37.89■■■■□ 3.66
HERC4-212ENST00000505760 GCC2Q8IWJ2 1684 aa37.88■■■■□ 3.66
HERC4-212ENST00000505760 PPARGC1BQ86YN6 1023 aaKnown RBP37.86■■■■□ 3.65
HERC4-212ENST00000505760 ITGAEP38570 1179 aa37.84■■■■□ 3.65
HERC4-212ENST00000505760 SOCS7O14512 581 aa37.82■■■■□ 3.64
HERC4-212ENST00000505760 XIRP1Q702N8 1843 aaKnown RBP37.82■■■■□ 3.64
HERC4-212ENST00000505760 SLC26A8Q96RN1 970 aa37.81■■■■□ 3.64
HERC4-212ENST00000505760 MYO5BQ9ULV0 1848 aa37.81■■■■□ 3.64
HERC4-212ENST00000505760 BCANQ96GW7 911 aa37.8■■■■□ 3.64
HERC4-212ENST00000505760 SENP3Q9H4L4 574 aaPredicted RBP37.77■■■■□ 3.64
HERC4-212ENST00000505760 E9PCH4 1651 aa37.76■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms