RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-209ENST00000504872 TSPY4P0CV99 314 aa16.53■□□□□ 0.24
APBB3-209ENST00000504872 TSPY10P0CW01 314 aa16.53■□□□□ 0.24
APBB3-209ENST00000504872 PKD2Q13563 968 aa16.53■□□□□ 0.24
APBB3-209ENST00000504872 PLA2R1Q13018 1463 aa16.53■□□□□ 0.24
APBB3-209ENST00000504872 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.23
APBB3-209ENST00000504872 PTPN23Q9H3S7 1636 aa16.51■□□□□ 0.23
APBB3-209ENST00000504872 ABCC5O15440 1437 aa16.51■□□□□ 0.23
APBB3-209ENST00000504872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
APBB3-209ENST00000504872 CPS1P31327 1500 aa16.5■□□□□ 0.23
APBB3-209ENST00000504872 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
APBB3-209ENST00000504872 DIP2CQ9Y2E4 1556 aa16.5■□□□□ 0.23
APBB3-209ENST00000504872 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
APBB3-209ENST00000504872 ATP7AQ04656 1500 aa16.49■□□□□ 0.23
APBB3-209ENST00000504872 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
APBB3-209ENST00000504872 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
APBB3-209ENST00000504872 AGLP35573 1532 aa16.47■□□□□ 0.23
APBB3-209ENST00000504872 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
APBB3-209ENST00000504872 ABCA6Q8N139 1617 aa16.47■□□□□ 0.23
APBB3-209ENST00000504872 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
APBB3-209ENST00000504872 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.23
APBB3-209ENST00000504872 DAPK1P53355 1430 aa16.45■□□□□ 0.22
APBB3-209ENST00000504872 NPATQ14207 1427 aa16.45■□□□□ 0.22
APBB3-209ENST00000504872 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
APBB3-209ENST00000504872 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
APBB3-209ENST00000504872 A2MP01023 1474 aa16.43■□□□□ 0.22
APBB3-209ENST00000504872 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
APBB3-209ENST00000504872 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
APBB3-209ENST00000504872 DNMT1P26358 1616 aaKnown RBP16.42■□□□□ 0.22
APBB3-209ENST00000504872 NEURL4Q96JN8 1562 aa16.42■□□□□ 0.22
APBB3-209ENST00000504872 MYO3AQ8NEV4 1616 aa16.41■□□□□ 0.22
APBB3-209ENST00000504872 CEP170BQ9Y4F5 1589 aaPredicted RBP16.41■□□□□ 0.22
APBB3-209ENST00000504872 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
APBB3-209ENST00000504872 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
APBB3-209ENST00000504872 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
APBB3-209ENST00000504872 ZMYM3Q14202 1370 aa16.38■□□□□ 0.21
APBB3-209ENST00000504872 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
APBB3-209ENST00000504872 RRP7BPQ9NSQ0 103 aa16.37■□□□□ 0.21
APBB3-209ENST00000504872 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
APBB3-209ENST00000504872 KIF3BO15066 747 aa16.35■□□□□ 0.21
APBB3-209ENST00000504872 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
APBB3-209ENST00000504872 ROCK1Q13464 1354 aa16.35■□□□□ 0.21
APBB3-209ENST00000504872 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
APBB3-209ENST00000504872 CROCC2H7BZ55 1655 aa16.34■□□□□ 0.21
APBB3-209ENST00000504872 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
APBB3-209ENST00000504872 KIF15Q9NS87 1388 aa16.34■□□□□ 0.21
APBB3-209ENST00000504872 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.2
APBB3-209ENST00000504872 GGT6Q6P531 493 aa16.32■□□□□ 0.2
APBB3-209ENST00000504872 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
APBB3-209ENST00000504872 TRIM52Q96A61 297 aa16.31■□□□□ 0.2
APBB3-209ENST00000504872 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
APBB3-209ENST00000504872 ERBINQ96RT1 1412 aa16.29■□□□□ 0.2
APBB3-209ENST00000504872 RNF17Q9BXT8 1623 aaKnown RBP16.29■□□□□ 0.2
APBB3-209ENST00000504872 ITGAEP38570 1179 aa16.28■□□□□ 0.2
APBB3-209ENST00000504872 POLR1AO95602 1720 aaPredicted RBP16.27■□□□□ 0.19
APBB3-209ENST00000504872 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
APBB3-209ENST00000504872 ANKRD50Q9ULJ7 1429 aa16.26■□□□□ 0.19
APBB3-209ENST00000504872 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
APBB3-209ENST00000504872 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
APBB3-209ENST00000504872 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
APBB3-209ENST00000504872 MROH1Q8NDA8 1641 aa16.23■□□□□ 0.19
APBB3-209ENST00000504872 WASHC2CQ9Y4E1 1318 aa16.22■□□□□ 0.19
APBB3-209ENST00000504872 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
APBB3-209ENST00000504872 NAIPQ13075 1403 aa16.21■□□□□ 0.19
APBB3-209ENST00000504872 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.18
APBB3-209ENST00000504872 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
APBB3-209ENST00000504872 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
APBB3-209ENST00000504872 DEPDC5O75140 1603 aa16.18■□□□□ 0.18
APBB3-209ENST00000504872 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
APBB3-209ENST00000504872 NPHP4O75161 1426 aaPredicted RBP16.17■□□□□ 0.18
APBB3-209ENST00000504872 LRP6O75581 1613 aa16.16■□□□□ 0.18
APBB3-209ENST00000504872 ABCC3O15438 1527 aa16.16■□□□□ 0.18
APBB3-209ENST00000504872 FBXO31Q5XUX0 539 aaPredicted RBP16.16■□□□□ 0.18
APBB3-209ENST00000504872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
APBB3-209ENST00000504872 ARHGAP31Q2M1Z3 1444 aa16.16■□□□□ 0.18
APBB3-209ENST00000504872 MED14O60244 1454 aa16.16■□□□□ 0.18
APBB3-209ENST00000504872 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
APBB3-209ENST00000504872 SYNMO15061 1565 aa16.15■□□□□ 0.18
APBB3-209ENST00000504872 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
APBB3-209ENST00000504872 KANK1Q14678 1352 aa16.13■□□□□ 0.17
APBB3-209ENST00000504872 IFFO2Q5TF58 517 aa16.13■□□□□ 0.17
APBB3-209ENST00000504872 PZPP20742 1482 aa16.13■□□□□ 0.17
APBB3-209ENST00000504872 ANKLE2Q86XL3 938 aa16.11■□□□□ 0.17
APBB3-209ENST00000504872 UNC13BO14795 1591 aa16.1■□□□□ 0.17
APBB3-209ENST00000504872 HRCP23327 699 aa16.1■□□□□ 0.17
APBB3-209ENST00000504872 ZC3H13Q5T200 1668 aaKnown RBP16.1■□□□□ 0.17
APBB3-209ENST00000504872 NUP155O75694 1391 aa16.1■□□□□ 0.17
APBB3-209ENST00000504872 ROBO1Q9Y6N7 1651 aa16.09■□□□□ 0.17
APBB3-209ENST00000504872 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.16
APBB3-209ENST00000504872 IQGAP1P46940 1657 aa16.08■□□□□ 0.16
APBB3-209ENST00000504872 RXRBP28702 533 aa16.07■□□□□ 0.16
APBB3-209ENST00000504872 SETD5Q9C0A6 1442 aa16.07■□□□□ 0.16
APBB3-209ENST00000504872 CDK12Q9NYV4 1490 aaPredicted RBP16.07■□□□□ 0.16
APBB3-209ENST00000504872 GCC2Q8IWJ2 1684 aa16.06■□□□□ 0.16
APBB3-209ENST00000504872 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
APBB3-209ENST00000504872 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
APBB3-209ENST00000504872 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
APBB3-209ENST00000504872 CEP152O94986 1710 aa16.05■□□□□ 0.16
APBB3-209ENST00000504872 NOS1P29475 1434 aa16.05■□□□□ 0.16
APBB3-209ENST00000504872 TNRQ92752 1358 aa16.05■□□□□ 0.16
APBB3-209ENST00000504872 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms