RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-209ENST00000504872 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
APBB3-209ENST00000504872 ABCC9O60706 1549 aa24.14■■□□□ 1.45
APBB3-209ENST00000504872 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
APBB3-209ENST00000504872 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
APBB3-209ENST00000504872 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
APBB3-209ENST00000504872 PABPN1Q86U42 306 aaKnown RBP eCLIP22.31■■□□□ 1.16
APBB3-209ENST00000504872 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
APBB3-209ENST00000504872 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.08
APBB3-209ENST00000504872 BICRAQ9NZM4 1560 aa21.81■■□□□ 1.08
APBB3-209ENST00000504872 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
APBB3-209ENST00000504872 NACADO15069 1562 aa21.72■■□□□ 1.07
APBB3-209ENST00000504872 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
APBB3-209ENST00000504872 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
APBB3-209ENST00000504872 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
APBB3-209ENST00000504872 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
APBB3-209ENST00000504872 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
APBB3-209ENST00000504872 TRIM41Q8WV44 630 aa21.31■■□□□ 1
APBB3-209ENST00000504872 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
APBB3-209ENST00000504872 CUX2O14529 1486 aa21.21■□□□□ 0.99
APBB3-209ENST00000504872 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
APBB3-209ENST00000504872 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
APBB3-209ENST00000504872 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
APBB3-209ENST00000504872 NESP48681 1621 aa20.41■□□□□ 0.86
APBB3-209ENST00000504872 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
APBB3-209ENST00000504872 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
APBB3-209ENST00000504872 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
APBB3-209ENST00000504872 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
APBB3-209ENST00000504872 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
APBB3-209ENST00000504872 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
APBB3-209ENST00000504872 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
APBB3-209ENST00000504872 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
APBB3-209ENST00000504872 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
APBB3-209ENST00000504872 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
APBB3-209ENST00000504872 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
APBB3-209ENST00000504872 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
APBB3-209ENST00000504872 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
APBB3-209ENST00000504872 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
APBB3-209ENST00000504872 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
APBB3-209ENST00000504872 ILDR1Q86SU0 546 aaPredicted RBP19.85■□□□□ 0.77
APBB3-209ENST00000504872 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
APBB3-209ENST00000504872 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
APBB3-209ENST00000504872 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
APBB3-209ENST00000504872 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
APBB3-209ENST00000504872 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
APBB3-209ENST00000504872 WDR62O43379 1518 aa19.75■□□□□ 0.75
APBB3-209ENST00000504872 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
APBB3-209ENST00000504872 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
APBB3-209ENST00000504872 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
APBB3-209ENST00000504872 WIZO95785 1651 aa19.66■□□□□ 0.74
APBB3-209ENST00000504872 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
APBB3-209ENST00000504872 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
APBB3-209ENST00000504872 CADPSQ9ULU8 1353 aa19.46■□□□□ 0.71
APBB3-209ENST00000504872 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
APBB3-209ENST00000504872 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
APBB3-209ENST00000504872 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
APBB3-209ENST00000504872 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
APBB3-209ENST00000504872 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
APBB3-209ENST00000504872 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
APBB3-209ENST00000504872 CFTRP13569 1480 aa19.24■□□□□ 0.67
APBB3-209ENST00000504872 CHD1O14646 1710 aa19.1■□□□□ 0.65
APBB3-209ENST00000504872 KDM4FA0A1W2PPD8 638 aa19.08■□□□□ 0.64
APBB3-209ENST00000504872 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
APBB3-209ENST00000504872 EIF4G3O43432 1585 aaKnown RBP18.99■□□□□ 0.63
APBB3-209ENST00000504872 FBLN2P98095 1184 aa18.95■□□□□ 0.62
APBB3-209ENST00000504872 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
APBB3-209ENST00000504872 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.621e-6■■■■■ 41.6
APBB3-209ENST00000504872 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
APBB3-209ENST00000504872 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
APBB3-209ENST00000504872 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
APBB3-209ENST00000504872 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
APBB3-209ENST00000504872 KIF13AQ9H1H9 1805 aa18.72■□□□□ 0.59
APBB3-209ENST00000504872 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
APBB3-209ENST00000504872 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
APBB3-209ENST00000504872 FBXO41Q8TF61 875 aa18.71■□□□□ 0.59
APBB3-209ENST00000504872 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
APBB3-209ENST00000504872 CUX1P39880 1505 aa18.67■□□□□ 0.58
APBB3-209ENST00000504872 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
APBB3-209ENST00000504872 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
APBB3-209ENST00000504872 ILDR2Q71H61 639 aa18.62■□□□□ 0.57
APBB3-209ENST00000504872 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
APBB3-209ENST00000504872 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
APBB3-209ENST00000504872 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
APBB3-209ENST00000504872 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.57
APBB3-209ENST00000504872 SOGA1O94964 1423 aa18.57■□□□□ 0.56
APBB3-209ENST00000504872 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
APBB3-209ENST00000504872 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
APBB3-209ENST00000504872 SOCS7O14512 581 aa18.56■□□□□ 0.56
APBB3-209ENST00000504872 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
APBB3-209ENST00000504872 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
APBB3-209ENST00000504872 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
APBB3-209ENST00000504872 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
APBB3-209ENST00000504872 ADGRL1O94910 1474 aa18.49■□□□□ 0.55
APBB3-209ENST00000504872 KDM6BO15054 1643 aa18.46■□□□□ 0.55
APBB3-209ENST00000504872 SYNJ2O15056 1496 aa18.46■□□□□ 0.54
APBB3-209ENST00000504872 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
APBB3-209ENST00000504872 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
APBB3-209ENST00000504872 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
APBB3-209ENST00000504872 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
APBB3-209ENST00000504872 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
APBB3-209ENST00000504872 DIP2BQ9P265 1576 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms