RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 ILDR1Q86SU0 546 aaPredicted RBP39.42■■■■□ 3.9
PVT1-201ENST00000504719 DNMT1P26358 1616 aaKnown RBP39.42■■■■□ 3.9
PVT1-201ENST00000504719 EIF2AK4Q9P2K8 1649 aaKnown RBP39.41■■■■□ 3.9
PVT1-201ENST00000504719 DAPK1P53355 1430 aa39.4■■■■□ 3.9
PVT1-201ENST00000504719 RNF17Q9BXT8 1623 aaKnown RBP39.4■■■■□ 3.9
PVT1-201ENST00000504719 DUOX2Q9NRD8 1548 aa39.38■■■■□ 3.89
PVT1-201ENST00000504719 WASHC2CQ9Y4E1 1318 aa39.38■■■■□ 3.89
PVT1-201ENST00000504719 MYO3AQ8NEV4 1616 aa39.36■■■■□ 3.89
PVT1-201ENST00000504719 ZNF142P52746 1687 aaPredicted RBP39.34■■■■□ 3.89
PVT1-201ENST00000504719 DMRT2Q9Y5R5 561 aa39.32■■■■□ 3.89
PVT1-201ENST00000504719 KIF15Q9NS87 1388 aa39.32■■■■□ 3.88
PVT1-201ENST00000504719 PZPP20742 1482 aa39.3■■■■□ 3.88
PVT1-201ENST00000504719 RRP7BPQ9NSQ0 103 aa39.28■■■■□ 3.88
PVT1-201ENST00000504719 CEP170BQ9Y4F5 1589 aaPredicted RBP39.28■■■■□ 3.88
PVT1-201ENST00000504719 MROH1Q8NDA8 1641 aa39.28■■■■□ 3.88
PVT1-201ENST00000504719 NCOA1Q15788 1441 aa39.27■■■■□ 3.88
PVT1-201ENST00000504719 CAMSAP1Q5T5Y3 1602 aa39.27■■■■□ 3.88
PVT1-201ENST00000504719 ZC3H13Q5T200 1668 aaKnown RBP39.26■■■■□ 3.88
PVT1-201ENST00000504719 FBXO31Q5XUX0 539 aaPredicted RBP39.26■■■■□ 3.88
PVT1-201ENST00000504719 ABCC3O15438 1527 aa39.24■■■■□ 3.87
PVT1-201ENST00000504719 ERBINQ96RT1 1412 aa39.24■■■■□ 3.87
PVT1-201ENST00000504719 PTPRTO14522 1441 aa39.23■■■■□ 3.87
PVT1-201ENST00000504719 CHIC2Q9UKJ5 165 aa39.22■■■■□ 3.87
PVT1-201ENST00000504719 TNRQ92752 1358 aa39.21■■■■□ 3.87
PVT1-201ENST00000504719 ANKRD30AQ9BXX3 1397 aa39.21■■■■□ 3.87
PVT1-201ENST00000504719 FAM50AQ14320 339 aaKnown RBP39.2■■■■□ 3.87
PVT1-201ENST00000504719 A2ML1A8K2U0 1454 aa39.19■■■■□ 3.86
PVT1-201ENST00000504719 CEP152O94986 1710 aa39.18■■■■□ 3.86
PVT1-201ENST00000504719 FBXO41Q8TF61 875 aa39.15■■■■□ 3.86
PVT1-201ENST00000504719 PLA2R1Q13018 1463 aa39.15■■■■□ 3.86
PVT1-201ENST00000504719 PRDM15P57071 1507 aaPredicted RBP39.14■■■■□ 3.86
PVT1-201ENST00000504719 ADGRL2O95490 1459 aa39.13■■■■□ 3.85
PVT1-201ENST00000504719 DEPDC5O75140 1603 aa39.11■■■■□ 3.85
PVT1-201ENST00000504719 NCKAP5LQ9HCH0 1330 aa39.1■■■■□ 3.85
PVT1-201ENST00000504719 CERKQ8TCT0 537 aa39.08■■■■□ 3.85
PVT1-201ENST00000504719 PKD2Q13563 968 aa39.07■■■■□ 3.85
PVT1-201ENST00000504719 SPATA31D1Q6ZQQ2 1576 aa39.07■■■■□ 3.84
PVT1-201ENST00000504719 CFAP65Q6ZU64 1925 aaKnown RBP39.06■■■■□ 3.84
PVT1-201ENST00000504719 NLRP1Q9C000 1473 aa39.05■■■■□ 3.84
PVT1-201ENST00000504719 PPARGC1BQ86YN6 1023 aaKnown RBP39.04■■■■□ 3.84
PVT1-201ENST00000504719 ERVK-7P63135 1459 aa39.03■■■■□ 3.84
PVT1-201ENST00000504719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.02■■■■□ 3.842e-6■■□□□ 12.5
PVT1-201ENST00000504719 ARHGAP31Q2M1Z3 1444 aa38.99■■■■□ 3.83
PVT1-201ENST00000504719 KANK1Q14678 1352 aa38.98■■■■□ 3.83
PVT1-201ENST00000504719 VWDEQ8N2E2 1590 aa38.95■■■■□ 3.83
PVT1-201ENST00000504719 UGGT1Q9NYU2 1555 aa38.95■■■■□ 3.83
PVT1-201ENST00000504719 POLR1AO95602 1720 aaPredicted RBP38.93■■■■□ 3.82
PVT1-201ENST00000504719 THEMISQ8N1K5 641 aaPredicted RBP38.93■■■■□ 3.82
PVT1-201ENST00000504719 LMTK2Q8IWU2 1503 aa38.93■■■■□ 3.82
PVT1-201ENST00000504719 ANKRD50Q9ULJ7 1429 aa38.92■■■■□ 3.82
PVT1-201ENST00000504719 LTBP4Q8N2S1 1624 aa38.92■■■■□ 3.82
PVT1-201ENST00000504719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.9■■■■□ 3.82
PVT1-201ENST00000504719 NEURL4Q96JN8 1562 aa38.86■■■■□ 3.81
PVT1-201ENST00000504719 ROCK1Q13464 1354 aa38.85■■■■□ 3.81
PVT1-201ENST00000504719 ANKLE2Q86XL3 938 aa38.83■■■■□ 3.81
PVT1-201ENST00000504719 UBR1Q8IWV7 1749 aa38.81■■■■□ 3.8
PVT1-201ENST00000504719 ZNF335Q9H4Z2 1342 aaPredicted RBP38.79■■■■□ 3.8
PVT1-201ENST00000504719 EFCAB6Q5THR3 1501 aa38.79■■■■□ 3.8
PVT1-201ENST00000504719 ITGAEP38570 1179 aa38.77■■■■□ 3.8
PVT1-201ENST00000504719 UNC13BO14795 1591 aa38.74■■■■□ 3.79
PVT1-201ENST00000504719 MED14O60244 1454 aa38.73■■■■□ 3.79
PVT1-201ENST00000504719 RRBP1Q9P2E9 1410 aaKnown RBP38.72■■■■□ 3.79
PVT1-201ENST00000504719 IQSEC2Q5JU85 1478 aa38.72■■■■□ 3.79
PVT1-201ENST00000504719 PIK3C2BO00750 1634 aa38.7■■■■□ 3.79
PVT1-201ENST00000504719 NPHP4O75161 1426 aaPredicted RBP38.69■■■■□ 3.78
PVT1-201ENST00000504719 NOS1P29475 1434 aa38.69■■■■□ 3.78
PVT1-201ENST00000504719 TET3O43151 1660 aa38.68■■■■□ 3.78
PVT1-201ENST00000504719 SYNMO15061 1565 aa38.68■■■■□ 3.78
PVT1-201ENST00000504719 IQGAP1P46940 1657 aa38.65■■■■□ 3.78
PVT1-201ENST00000504719 RPRD2Q5VT52 1461 aaKnown RBP38.65■■■■□ 3.78
PVT1-201ENST00000504719 GCC2Q8IWJ2 1684 aa38.65■■■■□ 3.78
PVT1-201ENST00000504719 ARHGAP23Q9P227 1491 aa38.64■■■■□ 3.78
PVT1-201ENST00000504719 SLIT1O75093 1534 aa38.63■■■■□ 3.78
PVT1-201ENST00000504719 IDI1Q13907 227 aa38.63■■■■□ 3.77
PVT1-201ENST00000504719 KDM5AP29375 1690 aaKnown RBP38.62■■■■□ 3.77
PVT1-201ENST00000504719 IQGAP3Q86VI3 1631 aa38.59■■■■□ 3.77
PVT1-201ENST00000504719 SCAF11Q99590 1463 aaKnown RBP38.58■■■■□ 3.77
PVT1-201ENST00000504719 STAG3Q9UJ98 1225 aa38.57■■■■□ 3.76
PVT1-201ENST00000504719 LTKP29376 864 aa38.56■■■■□ 3.76
PVT1-201ENST00000504719 SLC52A1Q9NWF4 448 aa38.55■■■■□ 3.76
PVT1-201ENST00000504719 TXNDC2Q86VQ3 553 aa38.54■■■■□ 3.76
PVT1-201ENST00000504719 E9PCH4 1651 aa38.53■■■■□ 3.76
PVT1-201ENST00000504719 TMEM2Q9UHN6 1383 aa38.53■■■■□ 3.76
PVT1-201ENST00000504719 CPS1P31327 1500 aa38.53■■■■□ 3.76
PVT1-201ENST00000504719 NUP155O75694 1391 aa38.52■■■■□ 3.76
PVT1-201ENST00000504719 ADGRB3O60242 1522 aa38.5■■■■□ 3.75
PVT1-201ENST00000504719 EID1Q9Y6B2 187 aa38.5■■■■□ 3.75
PVT1-201ENST00000504719 STRCP1A6NGW2 1772 aa38.43■■■■□ 3.74
PVT1-201ENST00000504719 MYO5BQ9ULV0 1848 aa38.42■■■■□ 3.74
PVT1-201ENST00000504719 NAIPQ13075 1403 aa38.41■■■■□ 3.74
PVT1-201ENST00000504719 UBAP1LF5GYI3 381 aa38.38■■■■□ 3.73
PVT1-201ENST00000504719 TMEM131LA2VDJ0 1609 aa38.37■■■■□ 3.73
PVT1-201ENST00000504719 HFM1A2PYH4 1435 aa38.3■■■■□ 3.72
PVT1-201ENST00000504719 ZFYVE9O95405 1425 aa38.29■■■■□ 3.72
PVT1-201ENST00000504719 LRRC7Q96NW7 1537 aa38.28■■■■□ 3.72
PVT1-201ENST00000504719 SPHKAPQ2M3C7 1700 aa38.26■■■■□ 3.71
PVT1-201ENST00000504719 RIMS2Q9UQ26 1411 aa38.25■■■■□ 3.71
PVT1-201ENST00000504719 CHGAP10645 457 aaKnown RBP38.24■■■■□ 3.71
PVT1-201ENST00000504719 TOM1O60784 492 aa38.21■■■■□ 3.71
PVT1-201ENST00000504719 HDGFP51858 240 aaKnown RBP38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms