RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 PTPRKQ15262 1439 aa38.56■■■■□ 3.76
TRIO-204ENST00000502816 RNF17Q9BXT8 1623 aaKnown RBP38.56■■■■□ 3.76
TRIO-204ENST00000502816 DUOX2Q9NRD8 1548 aa38.54■■■■□ 3.76
TRIO-204ENST00000502816 KDM5DQ9BY66 1539 aa38.53■■■■□ 3.76
TRIO-204ENST00000502816 STRCQ7RTU9 1775 aa38.48■■■■□ 3.75
TRIO-204ENST00000502816 WASHC2CQ9Y4E1 1318 aa38.45■■■■□ 3.75
TRIO-204ENST00000502816 KIF15Q9NS87 1388 aa38.44■■■■□ 3.74
TRIO-204ENST00000502816 MROH1Q8NDA8 1641 aa38.42■■■■□ 3.74
TRIO-204ENST00000502816 ERBINQ96RT1 1412 aa38.42■■■■□ 3.74
TRIO-204ENST00000502816 ZNF142P52746 1687 aaPredicted RBP38.42■■■■□ 3.74
TRIO-204ENST00000502816 PZPP20742 1482 aa38.41■■■■□ 3.74
TRIO-204ENST00000502816 ZC3H13Q5T200 1668 aaKnown RBP38.41■■■■□ 3.74
TRIO-204ENST00000502816 MYO3AQ8NEV4 1616 aa38.41■■■■□ 3.74
TRIO-204ENST00000502816 RRP7BPQ9NSQ0 103 aa38.37■■■■□ 3.73
TRIO-204ENST00000502816 NCOA1Q15788 1441 aa38.37■■■■□ 3.73
TRIO-204ENST00000502816 ADGRL2O95490 1459 aa38.36■■■■□ 3.73
TRIO-204ENST00000502816 ANKRD30AQ9BXX3 1397 aa38.36■■■■□ 3.73
TRIO-204ENST00000502816 ABCC3O15438 1527 aa38.36■■■■□ 3.73
TRIO-204ENST00000502816 DMRT2Q9Y5R5 561 aa38.34■■■■□ 3.73
TRIO-204ENST00000502816 CEP170BQ9Y4F5 1589 aaPredicted RBP38.32■■■■□ 3.73
TRIO-204ENST00000502816 PRDM15P57071 1507 aaPredicted RBP38.31■■■■□ 3.72
TRIO-204ENST00000502816 DEPDC5O75140 1603 aa38.3■■■■□ 3.72
TRIO-204ENST00000502816 FAM50AQ14320 339 aaKnown RBP38.3■■■■□ 3.72
TRIO-204ENST00000502816 FBXO31Q5XUX0 539 aaPredicted RBP38.29■■■■□ 3.72
TRIO-204ENST00000502816 CHIC2Q9UKJ5 165 aa38.29■■■■□ 3.72
TRIO-204ENST00000502816 CAMSAP1Q5T5Y3 1602 aa38.28■■■■□ 3.72
TRIO-204ENST00000502816 PTPRTO14522 1441 aa38.27■■■■□ 3.72
TRIO-204ENST00000502816 A2ML1A8K2U0 1454 aa38.27■■■■□ 3.72
TRIO-204ENST00000502816 TNRQ92752 1358 aa38.26■■■■□ 3.72
TRIO-204ENST00000502816 CEP152O94986 1710 aa38.24■■■■□ 3.71
TRIO-204ENST00000502816 PLA2R1Q13018 1463 aa38.24■■■■□ 3.71
TRIO-204ENST00000502816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.23■■■■□ 3.71
TRIO-204ENST00000502816 SPATA31D1Q6ZQQ2 1576 aa38.2■■■■□ 3.71
TRIO-204ENST00000502816 ILDR1Q86SU0 546 aaPredicted RBP38.2■■■■□ 3.71
TRIO-204ENST00000502816 ARHGAP31Q2M1Z3 1444 aa38.18■■■■□ 3.7
TRIO-204ENST00000502816 NLRP1Q9C000 1473 aa38.17■■■■□ 3.7
TRIO-204ENST00000502816 VWDEQ8N2E2 1590 aa38.17■■■■□ 3.7
TRIO-204ENST00000502816 LMTK2Q8IWU2 1503 aa38.13■■■■□ 3.69
TRIO-204ENST00000502816 ERVK-7P63135 1459 aa38.13■■■■□ 3.69
TRIO-204ENST00000502816 PKD2Q13563 968 aa38.12■■■■□ 3.69
TRIO-204ENST00000502816 PPARGC1BQ86YN6 1023 aaKnown RBP38.12■■■■□ 3.69
TRIO-204ENST00000502816 ROCK1Q13464 1354 aa38.11■■■■□ 3.69
TRIO-204ENST00000502816 KANK1Q14678 1352 aa38.1■■■■□ 3.69
TRIO-204ENST00000502816 ANKRD50Q9ULJ7 1429 aa38.1■■■■□ 3.69
TRIO-204ENST00000502816 NCKAP5LQ9HCH0 1330 aa38.07■■■■□ 3.68
TRIO-204ENST00000502816 FBXO41Q8TF61 875 aa38.06■■■■□ 3.68
TRIO-204ENST00000502816 CFAP65Q6ZU64 1925 aaKnown RBP38.06■■■■□ 3.68
TRIO-204ENST00000502816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.05■■■■□ 3.686e-7■□□□□ 8.9
TRIO-204ENST00000502816 UGGT1Q9NYU2 1555 aa38.03■■■■□ 3.68
TRIO-204ENST00000502816 CERKQ8TCT0 537 aa38.02■■■■□ 3.68
TRIO-204ENST00000502816 RRBP1Q9P2E9 1410 aaKnown RBP38.02■■■■□ 3.68
TRIO-204ENST00000502816 THEMISQ8N1K5 641 aaPredicted RBP38.01■■■■□ 3.68
TRIO-204ENST00000502816 POLR1AO95602 1720 aaPredicted RBP37.98■■■■□ 3.67
TRIO-204ENST00000502816 LTBP4Q8N2S1 1624 aa37.95■■■■□ 3.67
TRIO-204ENST00000502816 UNC13BO14795 1591 aa37.94■■■■□ 3.66
TRIO-204ENST00000502816 EFCAB6Q5THR3 1501 aa37.94■■■■□ 3.66
TRIO-204ENST00000502816 NEURL4Q96JN8 1562 aa37.93■■■■□ 3.66
TRIO-204ENST00000502816 UBR1Q8IWV7 1749 aa37.91■■■■□ 3.66
TRIO-204ENST00000502816 ANKLE2Q86XL3 938 aa37.88■■■■□ 3.65
TRIO-204ENST00000502816 MED14O60244 1454 aa37.88■■■■□ 3.65
TRIO-204ENST00000502816 RPRD2Q5VT52 1461 aaKnown RBP37.87■■■■□ 3.65
TRIO-204ENST00000502816 NOS1P29475 1434 aa37.87■■■■□ 3.65
TRIO-204ENST00000502816 TET3O43151 1660 aa37.86■■■■□ 3.65
TRIO-204ENST00000502816 KDM5AP29375 1690 aaKnown RBP37.84■■■■□ 3.65
TRIO-204ENST00000502816 ITGAEP38570 1179 aa37.83■■■■□ 3.65
TRIO-204ENST00000502816 GCC2Q8IWJ2 1684 aa37.82■■■■□ 3.64
TRIO-204ENST00000502816 SYNMO15061 1565 aa37.81■■■■□ 3.64
TRIO-204ENST00000502816 IQSEC2Q5JU85 1478 aa37.8■■■■□ 3.64
TRIO-204ENST00000502816 PIK3C2BO00750 1634 aa37.79■■■■□ 3.64
TRIO-204ENST00000502816 IQGAP3Q86VI3 1631 aa37.79■■■■□ 3.64
TRIO-204ENST00000502816 ARHGAP23Q9P227 1491 aa37.78■■■■□ 3.64
TRIO-204ENST00000502816 SLIT1O75093 1534 aa37.78■■■■□ 3.64
TRIO-204ENST00000502816 ZNF335Q9H4Z2 1342 aaPredicted RBP37.76■■■■□ 3.64
TRIO-204ENST00000502816 IDI1Q13907 227 aa37.75■■■■□ 3.63
TRIO-204ENST00000502816 NPHP4O75161 1426 aaPredicted RBP37.74■■■■□ 3.63
TRIO-204ENST00000502816 SLC52A1Q9NWF4 448 aa37.73■■■■□ 3.63
TRIO-204ENST00000502816 IQGAP1P46940 1657 aa37.72■■■■□ 3.63
TRIO-204ENST00000502816 E9PCH4 1651 aa37.69■■■■□ 3.62
TRIO-204ENST00000502816 NUP155O75694 1391 aa37.67■■■■□ 3.62
TRIO-204ENST00000502816 SCAF11Q99590 1463 aaKnown RBP37.66■■■■□ 3.62
TRIO-204ENST00000502816 NAIPQ13075 1403 aa37.66■■■■□ 3.62
TRIO-204ENST00000502816 TMEM2Q9UHN6 1383 aa37.66■■■■□ 3.62
TRIO-204ENST00000502816 LTKP29376 864 aa37.64■■■■□ 3.62
TRIO-204ENST00000502816 ADGRB3O60242 1522 aa37.62■■■■□ 3.61
TRIO-204ENST00000502816 TXNDC2Q86VQ3 553 aa37.6■■■■□ 3.61
TRIO-204ENST00000502816 CPS1P31327 1500 aa37.6■■■■□ 3.61
TRIO-204ENST00000502816 STAG3Q9UJ98 1225 aa37.59■■■■□ 3.61
TRIO-204ENST00000502816 HFM1A2PYH4 1435 aa37.58■■■■□ 3.61
TRIO-204ENST00000502816 EID1Q9Y6B2 187 aa37.57■■■■□ 3.6
TRIO-204ENST00000502816 TMEM131LA2VDJ0 1609 aa37.52■■■■□ 3.6
TRIO-204ENST00000502816 MYO5BQ9ULV0 1848 aa37.5■■■■□ 3.59
TRIO-204ENST00000502816 STRCP1A6NGW2 1772 aa37.47■■■■□ 3.59
TRIO-204ENST00000502816 ZFYVE9O95405 1425 aa37.44■■■■□ 3.58
TRIO-204ENST00000502816 SPHKAPQ2M3C7 1700 aa37.42■■■■□ 3.58
TRIO-204ENST00000502816 HDGFP51858 240 aaKnown RBP37.36■■■■□ 3.57
TRIO-204ENST00000502816 RIMS2Q9UQ26 1411 aa37.36■■■■□ 3.57
TRIO-204ENST00000502816 LRRC7Q96NW7 1537 aa37.34■■■■□ 3.57
TRIO-204ENST00000502816 PLEKHG1Q9ULL1 1385 aa37.31■■■■□ 3.56
TRIO-204ENST00000502816 UBAP1LF5GYI3 381 aa37.31■■■■□ 3.56
TRIO-204ENST00000502816 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms