RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
HMGXB4-207ENST00000498212 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
HMGXB4-207ENST00000498212 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
HMGXB4-207ENST00000498212 FAM135AQ9P2D6 1515 aa13.28□□□□□ -0.28
HMGXB4-207ENST00000498212 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
HMGXB4-207ENST00000498212 KIF3BO15066 747 aa13.27□□□□□ -0.29
HMGXB4-207ENST00000498212 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
HMGXB4-207ENST00000498212 RNF17Q9BXT8 1623 aaKnown RBP13.26□□□□□ -0.29
HMGXB4-207ENST00000498212 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
HMGXB4-207ENST00000498212 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
HMGXB4-207ENST00000498212 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
HMGXB4-207ENST00000498212 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
HMGXB4-207ENST00000498212 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
HMGXB4-207ENST00000498212 TCOF1Q13428 1488 aaKnown RBP13.23□□□□□ -0.29
HMGXB4-207ENST00000498212 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
HMGXB4-207ENST00000498212 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
HMGXB4-207ENST00000498212 CAMSAP1Q5T5Y3 1602 aa13.23□□□□□ -0.29
HMGXB4-207ENST00000498212 CEP152O94986 1710 aa13.22□□□□□ -0.29
HMGXB4-207ENST00000498212 DUOX2Q9NRD8 1548 aa13.22□□□□□ -0.29
HMGXB4-207ENST00000498212 ABCC5O15440 1437 aa13.21□□□□□ -0.3
HMGXB4-207ENST00000498212 DAPK1P53355 1430 aa13.21□□□□□ -0.3
HMGXB4-207ENST00000498212 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
HMGXB4-207ENST00000498212 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
HMGXB4-207ENST00000498212 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
HMGXB4-207ENST00000498212 PZPP20742 1482 aa13.2□□□□□ -0.3
HMGXB4-207ENST00000498212 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
HMGXB4-207ENST00000498212 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
HMGXB4-207ENST00000498212 PTPRTO14522 1441 aa13.19□□□□□ -0.3
HMGXB4-207ENST00000498212 POLR1AO95602 1720 aaPredicted RBP13.18□□□□□ -0.3
HMGXB4-207ENST00000498212 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
HMGXB4-207ENST00000498212 ABCC3O15438 1527 aa13.18□□□□□ -0.3
HMGXB4-207ENST00000498212 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
HMGXB4-207ENST00000498212 PLA2R1Q13018 1463 aa13.17□□□□□ -0.3
HMGXB4-207ENST00000498212 ERBINQ96RT1 1412 aa13.17□□□□□ -0.3
HMGXB4-207ENST00000498212 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
HMGXB4-207ENST00000498212 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
HMGXB4-207ENST00000498212 TNRQ92752 1358 aa13.16□□□□□ -0.3
HMGXB4-207ENST00000498212 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
HMGXB4-207ENST00000498212 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
HMGXB4-207ENST00000498212 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
HMGXB4-207ENST00000498212 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
HMGXB4-207ENST00000498212 SPATA31D1Q6ZQQ2 1576 aa13.14□□□□□ -0.31
HMGXB4-207ENST00000498212 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
HMGXB4-207ENST00000498212 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
HMGXB4-207ENST00000498212 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
HMGXB4-207ENST00000498212 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
HMGXB4-207ENST00000498212 FAM50AQ14320 339 aaKnown RBP13.12□□□□□ -0.31
HMGXB4-207ENST00000498212 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
HMGXB4-207ENST00000498212 PKD2Q13563 968 aa13.11□□□□□ -0.31
HMGXB4-207ENST00000498212 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
HMGXB4-207ENST00000498212 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
HMGXB4-207ENST00000498212 KANK1Q14678 1352 aa13.08□□□□□ -0.31
HMGXB4-207ENST00000498212 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
HMGXB4-207ENST00000498212 NEURL4Q96JN8 1562 aa13.08□□□□□ -0.32
HMGXB4-207ENST00000498212 VWDEQ8N2E2 1590 aa13.07□□□□□ -0.32
HMGXB4-207ENST00000498212 ARHGAP31Q2M1Z3 1444 aa13.07□□□□□ -0.32
HMGXB4-207ENST00000498212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMGXB4-207ENST00000498212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMGXB4-207ENST00000498212 THEMISQ8N1K5 641 aaPredicted RBP13.06□□□□□ -0.32
HMGXB4-207ENST00000498212 LMTK2Q8IWU2 1503 aa13.06□□□□□ -0.32
HMGXB4-207ENST00000498212 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
HMGXB4-207ENST00000498212 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
HMGXB4-207ENST00000498212 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
HMGXB4-207ENST00000498212 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
HMGXB4-207ENST00000498212 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
HMGXB4-207ENST00000498212 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 PIK3C2BO00750 1634 aa13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 GCC2Q8IWJ2 1684 aa13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 UNC13BO14795 1591 aa13.03□□□□□ -0.32
HMGXB4-207ENST00000498212 TET3O43151 1660 aa13.02□□□□□ -0.32
HMGXB4-207ENST00000498212 MED14O60244 1454 aa13.02□□□□□ -0.33
HMGXB4-207ENST00000498212 SYNMO15061 1565 aa13□□□□□ -0.33
HMGXB4-207ENST00000498212 NPHP4O75161 1426 aaPredicted RBP13□□□□□ -0.33
HMGXB4-207ENST00000498212 ROCK1Q13464 1354 aa13□□□□□ -0.33
HMGXB4-207ENST00000498212 SLIT1O75093 1534 aa12.98□□□□□ -0.33
HMGXB4-207ENST00000498212 MYO5BQ9ULV0 1848 aa12.98□□□□□ -0.33
HMGXB4-207ENST00000498212 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
HMGXB4-207ENST00000498212 CPS1P31327 1500 aa12.98□□□□□ -0.33
HMGXB4-207ENST00000498212 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
HMGXB4-207ENST00000498212 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
HMGXB4-207ENST00000498212 E9PCH4 1651 aa12.97□□□□□ -0.33
HMGXB4-207ENST00000498212 ITGAEP38570 1179 aa12.97□□□□□ -0.33
HMGXB4-207ENST00000498212 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
HMGXB4-207ENST00000498212 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
HMGXB4-207ENST00000498212 NOS1P29475 1434 aa12.96□□□□□ -0.33
HMGXB4-207ENST00000498212 ADGRB3O60242 1522 aa12.95□□□□□ -0.34
HMGXB4-207ENST00000498212 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
HMGXB4-207ENST00000498212 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
HMGXB4-207ENST00000498212 IDI1Q13907 227 aa12.94□□□□□ -0.34
HMGXB4-207ENST00000498212 TMEM2Q9UHN6 1383 aa12.93□□□□□ -0.34
HMGXB4-207ENST00000498212 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
HMGXB4-207ENST00000498212 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
HMGXB4-207ENST00000498212 LTKP29376 864 aa12.91□□□□□ -0.34
HMGXB4-207ENST00000498212 SLC52A1Q9NWF4 448 aa12.91□□□□□ -0.34
HMGXB4-207ENST00000498212 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
HMGXB4-207ENST00000498212 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.34
HMGXB4-207ENST00000498212 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms