RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 MIA2Q96PC5 1412 aa35.69■■■■□ 3.3
CDKN2A-208ENST00000498124 LTBP4Q8N2S1 1624 aa35.68■■■■□ 3.3
CDKN2A-208ENST00000498124 PLA2R1Q13018 1463 aa35.67■■■■□ 3.3
CDKN2A-208ENST00000498124 TSPY4P0CV99 314 aa35.64■■■■□ 3.3
CDKN2A-208ENST00000498124 TSPY10P0CW01 314 aa35.64■■■■□ 3.3
CDKN2A-208ENST00000498124 PZPP20742 1482 aa35.64■■■■□ 3.3
CDKN2A-208ENST00000498124 TCOF1Q13428 1488 aaKnown RBP35.63■■■■□ 3.29
CDKN2A-208ENST00000498124 RNF17Q9BXT8 1623 aaKnown RBP35.63■■■■□ 3.29
CDKN2A-208ENST00000498124 A2ML1A8K2U0 1454 aa35.61■■■■□ 3.29
CDKN2A-208ENST00000498124 DNMT1P26358 1616 aaKnown RBP35.6■■■■□ 3.29
CDKN2A-208ENST00000498124 NCKAP5LQ9HCH0 1330 aa35.59■■■■□ 3.29
CDKN2A-208ENST00000498124 EIF2AK4Q9P2K8 1649 aaKnown RBP35.57■■■■□ 3.28
CDKN2A-208ENST00000498124 FBXO31Q5XUX0 539 aaPredicted RBP35.56■■■■□ 3.28
CDKN2A-208ENST00000498124 TNRQ92752 1358 aa35.55■■■■□ 3.28
CDKN2A-208ENST00000498124 MROH1Q8NDA8 1641 aa35.54■■■■□ 3.28
CDKN2A-208ENST00000498124 WASHC2CQ9Y4E1 1318 aa35.54■■■■□ 3.28
CDKN2A-208ENST00000498124 CROCC2H7BZ55 1655 aa35.52■■■■□ 3.28
CDKN2A-208ENST00000498124 ABCC3O15438 1527 aa35.52■■■■□ 3.28
CDKN2A-208ENST00000498124 PTPN23Q9H3S7 1636 aa35.51■■■■□ 3.28
CDKN2A-208ENST00000498124 PKD2Q13563 968 aa35.51■■■■□ 3.28
CDKN2A-208ENST00000498124 ZC3H13Q5T200 1668 aaKnown RBP35.5■■■■□ 3.27
CDKN2A-208ENST00000498124 SHANK2Q9UPX8 1470 aa35.48■■■■□ 3.27
CDKN2A-208ENST00000498124 IQSEC2Q5JU85 1478 aa35.48■■■■□ 3.27
CDKN2A-208ENST00000498124 ABCC5O15440 1437 aa35.47■■■■□ 3.27
CDKN2A-208ENST00000498124 DUOX2Q9NRD8 1548 aa35.47■■■■□ 3.27
CDKN2A-208ENST00000498124 NEURL4Q96JN8 1562 aa35.44■■■■□ 3.26
CDKN2A-208ENST00000498124 ZNF335Q9H4Z2 1342 aaPredicted RBP35.43■■■■□ 3.26
CDKN2A-208ENST00000498124 POLR1AO95602 1720 aaPredicted RBP35.43■■■■□ 3.26
CDKN2A-208ENST00000498124 FGD6Q6ZV73 1430 aa35.42■■■■□ 3.26
CDKN2A-208ENST00000498124 NLRP1Q9C000 1473 aa35.41■■■■□ 3.26
CDKN2A-208ENST00000498124 SPATA31D1Q6ZQQ2 1576 aa35.41■■■■□ 3.26
CDKN2A-208ENST00000498124 APLP2Q06481 763 aa35.4■■■■□ 3.26
CDKN2A-208ENST00000498124 CEP152O94986 1710 aa35.4■■■■□ 3.26
CDKN2A-208ENST00000498124 KIF15Q9NS87 1388 aa35.38■■■■□ 3.26
CDKN2A-208ENST00000498124 DAPK1P53355 1430 aa35.38■■■■□ 3.25
CDKN2A-208ENST00000498124 PRDM15P57071 1507 aaPredicted RBP35.37■■■■□ 3.25
CDKN2A-208ENST00000498124 ERVK-7P63135 1459 aa35.35■■■■□ 3.25
CDKN2A-208ENST00000498124 ERBINQ96RT1 1412 aa35.34■■■■□ 3.25
CDKN2A-208ENST00000498124 UGGT1Q9NYU2 1555 aa35.34■■■■□ 3.25
CDKN2A-208ENST00000498124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.31■■■■□ 3.24
CDKN2A-208ENST00000498124 DEPDC5O75140 1603 aa35.3■■■■□ 3.24
CDKN2A-208ENST00000498124 RRP7BPQ9NSQ0 103 aa35.27■■■■□ 3.24
CDKN2A-208ENST00000498124 THEMISQ8N1K5 641 aaPredicted RBP35.24■■■■□ 3.23
CDKN2A-208ENST00000498124 MED14O60244 1454 aa35.23■■■■□ 3.23
CDKN2A-208ENST00000498124 ARHGAP31Q2M1Z3 1444 aa35.22■■■■□ 3.23
CDKN2A-208ENST00000498124 ANKLE2Q86XL3 938 aa35.2■■■■□ 3.23
CDKN2A-208ENST00000498124 VWDEQ8N2E2 1590 aa35.2■■■■□ 3.23
CDKN2A-208ENST00000498124 CFAP65Q6ZU64 1925 aaKnown RBP35.19■■■■□ 3.22
CDKN2A-208ENST00000498124 UBR1Q8IWV7 1749 aa35.19■■■■□ 3.22
CDKN2A-208ENST00000498124 NPHP4O75161 1426 aaPredicted RBP35.17■■■■□ 3.22
CDKN2A-208ENST00000498124 ADGRL2O95490 1459 aa35.16■■■■□ 3.22
CDKN2A-208ENST00000498124 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
CDKN2A-208ENST00000498124 IQGAP1P46940 1657 aa35.16■■■■□ 3.22
CDKN2A-208ENST00000498124 CHIC2Q9UKJ5 165 aa35.15■■■■□ 3.22
CDKN2A-208ENST00000498124 CPS1P31327 1500 aa35.15■■■■□ 3.22
CDKN2A-208ENST00000498124 LMTK2Q8IWU2 1503 aa35.13■■■■□ 3.21
CDKN2A-208ENST00000498124 UBAP1LF5GYI3 381 aa35.09■■■■□ 3.21
CDKN2A-208ENST00000498124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.09■■■■□ 3.21
CDKN2A-208ENST00000498124 ARHGAP23Q9P227 1491 aa35.07■■■■□ 3.2
CDKN2A-208ENST00000498124 KANK1Q14678 1352 aa35.05■■■■□ 3.2
CDKN2A-208ENST00000498124 SLIT1O75093 1534 aa35.05■■■■□ 3.2
CDKN2A-208ENST00000498124 PIK3C2BO00750 1634 aa35.04■■■■□ 3.2
CDKN2A-208ENST00000498124 STRCP1A6NGW2 1772 aa35.02■■■■□ 3.2
CDKN2A-208ENST00000498124 EFCAB6Q5THR3 1501 aa35.02■■■■□ 3.2
CDKN2A-208ENST00000498124 SCAF11Q99590 1463 aaKnown RBP35.02■■■■□ 3.2
CDKN2A-208ENST00000498124 FAM50AQ14320 339 aaKnown RBP35.01■■■■□ 3.2
CDKN2A-208ENST00000498124 SYNMO15061 1565 aa35■■■■□ 3.19
CDKN2A-208ENST00000498124 DISP3Q9P2K9 1392 aa34.96■■■■□ 3.19
CDKN2A-208ENST00000498124 KDM5AP29375 1690 aaKnown RBP34.95■■■■□ 3.19
CDKN2A-208ENST00000498124 LTKP29376 864 aa34.95■■■■□ 3.19
CDKN2A-208ENST00000498124 ANKRD50Q9ULJ7 1429 aa34.95■■■■□ 3.19
CDKN2A-208ENST00000498124 ALKQ9UM73 1620 aa34.95■■■■□ 3.18
CDKN2A-208ENST00000498124 NOS1P29475 1434 aa34.94■■■■□ 3.18
CDKN2A-208ENST00000498124 LRRC7Q96NW7 1537 aa34.9■■■■□ 3.18
CDKN2A-208ENST00000498124 TMEM2Q9UHN6 1383 aa34.89■■■■□ 3.18
CDKN2A-208ENST00000498124 IDI1Q13907 227 aa34.87■■■■□ 3.17
CDKN2A-208ENST00000498124 TXNDC2Q86VQ3 553 aa34.87■■■■□ 3.17
CDKN2A-208ENST00000498124 UNC13BO14795 1591 aa34.86■■■■□ 3.17
CDKN2A-208ENST00000498124 TET3O43151 1660 aa34.85■■■■□ 3.17
CDKN2A-208ENST00000498124 ADGRB3O60242 1522 aa34.85■■■■□ 3.17
CDKN2A-208ENST00000498124 RPRD2Q5VT52 1461 aaKnown RBP34.84■■■■□ 3.17
CDKN2A-208ENST00000498124 TOM1O60784 492 aa34.82■■■■□ 3.16
CDKN2A-208ENST00000498124 ILDR2Q71H61 639 aa34.82■■■■□ 3.16
CDKN2A-208ENST00000498124 ROCK1Q13464 1354 aa34.8■■■■□ 3.16
CDKN2A-208ENST00000498124 PIP4K2BP78356 416 aa34.8■■■■□ 3.16
CDKN2A-208ENST00000498124 EID1Q9Y6B2 187 aa34.79■■■■□ 3.16
CDKN2A-208ENST00000498124 GCC2Q8IWJ2 1684 aa34.78■■■■□ 3.16
CDKN2A-208ENST00000498124 SCAF1Q9H7N4 1312 aaKnown RBP34.77■■■■□ 3.16
CDKN2A-208ENST00000498124 HSPA1LP34931 641 aa34.76■■■■□ 3.16
CDKN2A-208ENST00000498124 STAG3Q9UJ98 1225 aa34.76■■■■□ 3.16
CDKN2A-208ENST00000498124 XIRP1Q702N8 1843 aaKnown RBP34.74■■■■□ 3.15
CDKN2A-208ENST00000498124 SLC52A1Q9NWF4 448 aa34.73■■■■□ 3.15
CDKN2A-208ENST00000498124 IQGAP3Q86VI3 1631 aa34.7■■■■□ 3.15
CDKN2A-208ENST00000498124 E9PCH4 1651 aa34.7■■■■□ 3.15
CDKN2A-208ENST00000498124 MYO5BQ9ULV0 1848 aa34.69■■■■□ 3.14
CDKN2A-208ENST00000498124 PPARGC1BQ86YN6 1023 aaKnown RBP34.68■■■■□ 3.14
CDKN2A-208ENST00000498124 TMEM131LA2VDJ0 1609 aa34.66■■■■□ 3.14
CDKN2A-208ENST00000498124 ZFYVE9O95405 1425 aa34.66■■■■□ 3.14
CDKN2A-208ENST00000498124 NWD1Q149M9 1564 aa34.61■■■■□ 3.13
CDKN2A-208ENST00000498124 MED1Q15648 1581 aaPredicted RBP34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms