RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 MIA2Q96PC5 1412 aa20.38■□□□□ 0.85
FN1-226ENST00000496542 APLP2Q06481 763 aa20.38■□□□□ 0.85
FN1-226ENST00000496542 MAST1Q9Y2H9 1570 aa20.38■□□□□ 0.85
FN1-226ENST00000496542 FAM135AQ9P2D6 1515 aa20.36■□□□□ 0.85
FN1-226ENST00000496542 NCKAP5LQ9HCH0 1330 aa20.33■□□□□ 0.85
FN1-226ENST00000496542 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
FN1-226ENST00000496542 PZPP20742 1482 aa20.32■□□□□ 0.84
FN1-226ENST00000496542 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
FN1-226ENST00000496542 A2ML1A8K2U0 1454 aa20.31■□□□□ 0.84
FN1-226ENST00000496542 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
FN1-226ENST00000496542 FBXO31Q5XUX0 539 aaPredicted RBP20.31■□□□□ 0.84
FN1-226ENST00000496542 TNRQ92752 1358 aa20.31■□□□□ 0.84
FN1-226ENST00000496542 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
FN1-226ENST00000496542 EIF2AK4Q9P2K8 1649 aaKnown RBP20.29■□□□□ 0.84
FN1-226ENST00000496542 CROCC2H7BZ55 1655 aa20.29■□□□□ 0.84
FN1-226ENST00000496542 DNMT1P26358 1616 aaKnown RBP20.28■□□□□ 0.84
FN1-226ENST00000496542 LTBP4Q8N2S1 1624 aa20.28■□□□□ 0.84
FN1-226ENST00000496542 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
FN1-226ENST00000496542 PKD2Q13563 968 aa20.27■□□□□ 0.84
FN1-226ENST00000496542 ABCC3O15438 1527 aa20.27■□□□□ 0.83
FN1-226ENST00000496542 DUOX2Q9NRD8 1548 aa20.26■□□□□ 0.83
FN1-226ENST00000496542 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
FN1-226ENST00000496542 SHANK2Q9UPX8 1470 aa20.25■□□□□ 0.83
FN1-226ENST00000496542 FGD6Q6ZV73 1430 aa20.25■□□□□ 0.83
FN1-226ENST00000496542 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
FN1-226ENST00000496542 ABCC5O15440 1437 aa20.24■□□□□ 0.83
FN1-226ENST00000496542 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
FN1-226ENST00000496542 CEP152O94986 1710 aa20.23■□□□□ 0.83
FN1-226ENST00000496542 DAPK1P53355 1430 aa20.22■□□□□ 0.83
FN1-226ENST00000496542 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
FN1-226ENST00000496542 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
FN1-226ENST00000496542 NLRP1Q9C000 1473 aa20.21■□□□□ 0.83
FN1-226ENST00000496542 CFAP65Q6ZU64 1925 aaKnown RBP20.2■□□□□ 0.82
FN1-226ENST00000496542 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
FN1-226ENST00000496542 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
FN1-226ENST00000496542 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
FN1-226ENST00000496542 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
FN1-226ENST00000496542 SPATA31D1Q6ZQQ2 1576 aa20.17■□□□□ 0.82
FN1-226ENST00000496542 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
FN1-226ENST00000496542 NEURL4Q96JN8 1562 aa20.17■□□□□ 0.82
FN1-226ENST00000496542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.82
FN1-226ENST00000496542 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
FN1-226ENST00000496542 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
FN1-226ENST00000496542 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
FN1-226ENST00000496542 ANKRD30AQ9BXX3 1397 aa20.13■□□□□ 0.81
FN1-226ENST00000496542 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
FN1-226ENST00000496542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.81
FN1-226ENST00000496542 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
FN1-226ENST00000496542 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
FN1-226ENST00000496542 KANK1Q14678 1352 aa20.08■□□□□ 0.81
FN1-226ENST00000496542 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.8
FN1-226ENST00000496542 ARHGAP31Q2M1Z3 1444 aa20.08■□□□□ 0.8
FN1-226ENST00000496542 UBR1Q8IWV7 1749 aa20.07■□□□□ 0.8
FN1-226ENST00000496542 UBAP1LF5GYI3 381 aa20.06■□□□□ 0.8
FN1-226ENST00000496542 IQGAP1P46940 1657 aa20.06■□□□□ 0.8
FN1-226ENST00000496542 MED14O60244 1454 aa20.05■□□□□ 0.8
FN1-226ENST00000496542 ADGRL2O95490 1459 aa20.05■□□□□ 0.8
FN1-226ENST00000496542 CPS1P31327 1500 aa20.04■□□□□ 0.8
FN1-226ENST00000496542 VWDEQ8N2E2 1590 aa20.04■□□□□ 0.8
FN1-226ENST00000496542 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
FN1-226ENST00000496542 PIK3C2BO00750 1634 aa20■□□□□ 0.79
FN1-226ENST00000496542 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
FN1-226ENST00000496542 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
FN1-226ENST00000496542 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
FN1-226ENST00000496542 ARHGAP23Q9P227 1491 aa19.97■□□□□ 0.79
FN1-226ENST00000496542 SLIT1O75093 1534 aa19.97■□□□□ 0.79
FN1-226ENST00000496542 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.79
FN1-226ENST00000496542 SYNMO15061 1565 aa19.95■□□□□ 0.78
FN1-226ENST00000496542 STAG3Q9UJ98 1225 aa19.95■□□□□ 0.78
FN1-226ENST00000496542 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
FN1-226ENST00000496542 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
FN1-226ENST00000496542 LTKP29376 864 aa19.94■□□□□ 0.78
FN1-226ENST00000496542 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
FN1-226ENST00000496542 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
FN1-226ENST00000496542 EID1Q9Y6B2 187 aa19.92■□□□□ 0.78
FN1-226ENST00000496542 NOS1P29475 1434 aa19.92■□□□□ 0.78
FN1-226ENST00000496542 KDM5AP29375 1690 aaKnown RBP19.91■□□□□ 0.78
FN1-226ENST00000496542 PIP4K2BP78356 416 aa19.91■□□□□ 0.78
FN1-226ENST00000496542 IDI1Q13907 227 aa19.91■□□□□ 0.78
FN1-226ENST00000496542 TMEM2Q9UHN6 1383 aa19.91■□□□□ 0.78
FN1-226ENST00000496542 TET3O43151 1660 aa19.91■□□□□ 0.78
FN1-226ENST00000496542 TOM1O60784 492 aa19.9■□□□□ 0.78
FN1-226ENST00000496542 UNC13BO14795 1591 aa19.9■□□□□ 0.78
FN1-226ENST00000496542 ADGRB3O60242 1522 aa19.89■□□□□ 0.77
FN1-226ENST00000496542 LRRC7Q96NW7 1537 aa19.88■□□□□ 0.77
FN1-226ENST00000496542 RPRD2Q5VT52 1461 aaKnown RBP19.88■□□□□ 0.77
FN1-226ENST00000496542 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
FN1-226ENST00000496542 ITGAEP38570 1179 aa19.88■□□□□ 0.77
FN1-226ENST00000496542 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
FN1-226ENST00000496542 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
FN1-226ENST00000496542 SLC52A1Q9NWF4 448 aa19.84■□□□□ 0.77
FN1-226ENST00000496542 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.77
FN1-226ENST00000496542 HSPA1LP34931 641 aa19.83■□□□□ 0.77
FN1-226ENST00000496542 E9PCH4 1651 aa19.81■□□□□ 0.76
FN1-226ENST00000496542 IQGAP3Q86VI3 1631 aa19.81■□□□□ 0.76
FN1-226ENST00000496542 ILDR2Q71H61 639 aa19.8■□□□□ 0.76
FN1-226ENST00000496542 XIRP1Q702N8 1843 aaKnown RBP19.79■□□□□ 0.76
FN1-226ENST00000496542 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
FN1-226ENST00000496542 TMEM131LA2VDJ0 1609 aa19.77■□□□□ 0.76
FN1-226ENST00000496542 BCANQ96GW7 911 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms