RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 KDM5DQ9BY66 1539 aa34.27■■■■□ 3.08
PCOLCE-210ENST00000496269 NPATQ14207 1427 aa34.25■■■■□ 3.07
PCOLCE-210ENST00000496269 KIF15Q9NS87 1388 aa34.23■■■■□ 3.07
PCOLCE-210ENST00000496269 ADGRL2O95490 1459 aa34.23■■■■□ 3.07
PCOLCE-210ENST00000496269 PTPRKQ15262 1439 aa34.21■■■■□ 3.07
PCOLCE-210ENST00000496269 UHRF1BP1Q6BDS2 1440 aa34.2■■■■□ 3.06
PCOLCE-210ENST00000496269 ERBINQ96RT1 1412 aa34.2■■■■□ 3.06
PCOLCE-210ENST00000496269 ZC3H13Q5T200 1668 aaKnown RBP34.19■■■■□ 3.06
PCOLCE-210ENST00000496269 HSPA2P54652 639 aa34.18■■■■□ 3.06
PCOLCE-210ENST00000496269 DEPDC5O75140 1603 aa34.18■■■■□ 3.06
PCOLCE-210ENST00000496269 NCOA1Q15788 1441 aa34.17■■■■□ 3.06
PCOLCE-210ENST00000496269 ABCC3O15438 1527 aa34.16■■■■□ 3.06
PCOLCE-210ENST00000496269 PPARGC1BQ86YN6 1023 aaKnown RBP34.16■■■■□ 3.06
PCOLCE-210ENST00000496269 MYO3AQ8NEV4 1616 aa34.15■■■■□ 3.06
PCOLCE-210ENST00000496269 PRDM15P57071 1507 aaPredicted RBP34.15■■■■□ 3.06
PCOLCE-210ENST00000496269 ZNF142P52746 1687 aaPredicted RBP34.15■■■■□ 3.06
PCOLCE-210ENST00000496269 FAM50AQ14320 339 aaKnown RBP34.14■■■■□ 3.06
PCOLCE-210ENST00000496269 CEP152O94986 1710 aa34.13■■■■□ 3.05
PCOLCE-210ENST00000496269 ANKRD30AQ9BXX3 1397 aa34.12■■■■□ 3.05
PCOLCE-210ENST00000496269 RRP7BPQ9NSQ0 103 aa34.12■■■■□ 3.05
PCOLCE-210ENST00000496269 PZPP20742 1482 aa34.12■■■■□ 3.05
PCOLCE-210ENST00000496269 STRCQ7RTU9 1775 aa34.11■■■■□ 3.05
PCOLCE-210ENST00000496269 CHIC2Q9UKJ5 165 aa34.1■■■■□ 3.05
PCOLCE-210ENST00000496269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.09■■■■□ 3.05
PCOLCE-210ENST00000496269 CAMSAP1Q5T5Y3 1602 aa34.07■■■■□ 3.04
PCOLCE-210ENST00000496269 WASHC2CQ9Y4E1 1318 aa34.05■■■■□ 3.04
PCOLCE-210ENST00000496269 VWDEQ8N2E2 1590 aa34.03■■■■□ 3.04
PCOLCE-210ENST00000496269 CEP170BQ9Y4F5 1589 aaPredicted RBP34.03■■■■□ 3.04
PCOLCE-210ENST00000496269 RRBP1Q9P2E9 1410 aaKnown RBP34.03■■■■□ 3.04
PCOLCE-210ENST00000496269 SPATA31D1Q6ZQQ2 1576 aa33.98■■■■□ 3.03
PCOLCE-210ENST00000496269 FBXO31Q5XUX0 539 aaPredicted RBP33.98■■■■□ 3.03
PCOLCE-210ENST00000496269 ROCK1Q13464 1354 aa33.97■■■■□ 3.03
PCOLCE-210ENST00000496269 LMTK2Q8IWU2 1503 aa33.94■■■■□ 3.02
PCOLCE-210ENST00000496269 TNRQ92752 1358 aa33.94■■■■□ 3.02
PCOLCE-210ENST00000496269 ANKRD50Q9ULJ7 1429 aa33.94■■■■□ 3.02
PCOLCE-210ENST00000496269 A2ML1A8K2U0 1454 aa33.94■■■■□ 3.02
PCOLCE-210ENST00000496269 ARHGAP31Q2M1Z3 1444 aa33.92■■■■□ 3.02
PCOLCE-210ENST00000496269 ERVK-7P63135 1459 aa33.92■■■■□ 3.02
PCOLCE-210ENST00000496269 UNC13BO14795 1591 aa33.89■■■■□ 3.02
PCOLCE-210ENST00000496269 PLA2R1Q13018 1463 aa33.87■■■■□ 3.01
PCOLCE-210ENST00000496269 CFAP65Q6ZU64 1925 aaKnown RBP33.87■■■■□ 3.01
PCOLCE-210ENST00000496269 NLRP1Q9C000 1473 aa33.85■■■■□ 3.01
PCOLCE-210ENST00000496269 EFCAB6Q5THR3 1501 aa33.83■■■■□ 3.01
PCOLCE-210ENST00000496269 KANK1Q14678 1352 aa33.82■■■■□ 3
PCOLCE-210ENST00000496269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.81■■■■□ 3
PCOLCE-210ENST00000496269 PTPRTO14522 1441 aa33.8■■■■□ 3
PCOLCE-210ENST00000496269 TET3O43151 1660 aa33.77■■■■□ 3
PCOLCE-210ENST00000496269 ITGAEP38570 1179 aa33.76■■■□□ 2.99
PCOLCE-210ENST00000496269 POLR1AO95602 1720 aaPredicted RBP33.75■■■□□ 2.99
PCOLCE-210ENST00000496269 GCC2Q8IWJ2 1684 aa33.74■■■□□ 2.99
PCOLCE-210ENST00000496269 UGGT1Q9NYU2 1555 aa33.74■■■□□ 2.99
PCOLCE-210ENST00000496269 IQGAP3Q86VI3 1631 aa33.74■■■□□ 2.99
PCOLCE-210ENST00000496269 UBR1Q8IWV7 1749 aa33.73■■■□□ 2.99
PCOLCE-210ENST00000496269 SYNMO15061 1565 aa33.72■■■□□ 2.99
PCOLCE-210ENST00000496269 NEURL4Q96JN8 1562 aa33.72■■■□□ 2.99
PCOLCE-210ENST00000496269 DMRT2Q9Y5R5 561 aa33.71■■■□□ 2.99
PCOLCE-210ENST00000496269 NOS1P29475 1434 aa33.69■■■□□ 2.98
PCOLCE-210ENST00000496269 NCKAP5LQ9HCH0 1330 aa33.68■■■□□ 2.98
PCOLCE-210ENST00000496269 PIK3C2BO00750 1634 aa33.66■■■□□ 2.98
PCOLCE-210ENST00000496269 RPRD2Q5VT52 1461 aaKnown RBP33.66■■■□□ 2.98
PCOLCE-210ENST00000496269 E9PCH4 1651 aa33.65■■■□□ 2.98
PCOLCE-210ENST00000496269 NAIPQ13075 1403 aa33.65■■■□□ 2.98
PCOLCE-210ENST00000496269 PKD2Q13563 968 aa33.65■■■□□ 2.98
PCOLCE-210ENST00000496269 KDM5AP29375 1690 aaKnown RBP33.62■■■□□ 2.97
PCOLCE-210ENST00000496269 LTBP4Q8N2S1 1624 aa33.6■■■□□ 2.97
PCOLCE-210ENST00000496269 THEMISQ8N1K5 641 aaPredicted RBP33.58■■■□□ 2.97
PCOLCE-210ENST00000496269 HFM1A2PYH4 1435 aa33.57■■■□□ 2.96
PCOLCE-210ENST00000496269 ARHGAP23Q9P227 1491 aa33.56■■■□□ 2.96
PCOLCE-210ENST00000496269 MED14O60244 1454 aa33.56■■■□□ 2.96
PCOLCE-210ENST00000496269 SLIT1O75093 1534 aa33.55■■■□□ 2.96
PCOLCE-210ENST00000496269 NUP155O75694 1391 aa33.53■■■□□ 2.96
PCOLCE-210ENST00000496269 ADGRB3O60242 1522 aa33.51■■■□□ 2.95
PCOLCE-210ENST00000496269 ILDR1Q86SU0 546 aaPredicted RBP33.5■■■□□ 2.95
PCOLCE-210ENST00000496269 IQGAP1P46940 1657 aa33.49■■■□□ 2.95
PCOLCE-210ENST00000496269 IDI1Q13907 227 aa33.48■■■□□ 2.95
PCOLCE-210ENST00000496269 CERKQ8TCT0 537 aa33.47■■■□□ 2.95
PCOLCE-210ENST00000496269 ANKLE2Q86XL3 938 aa33.46■■■□□ 2.95
PCOLCE-210ENST00000496269 MYO5BQ9ULV0 1848 aa33.46■■■□□ 2.95
PCOLCE-210ENST00000496269 NPHP4O75161 1426 aaPredicted RBP33.45■■■□□ 2.95
PCOLCE-210ENST00000496269 SCAF11Q99590 1463 aaKnown RBP33.43■■■□□ 2.94
PCOLCE-210ENST00000496269 TMEM131LA2VDJ0 1609 aa33.42■■■□□ 2.94
PCOLCE-210ENST00000496269 ZNF335Q9H4Z2 1342 aaPredicted RBP33.41■■■□□ 2.94
PCOLCE-210ENST00000496269 TMEM2Q9UHN6 1383 aa33.41■■■□□ 2.94
PCOLCE-210ENST00000496269 SPHKAPQ2M3C7 1700 aa33.41■■■□□ 2.94
PCOLCE-210ENST00000496269 FBXO41Q8TF61 875 aa33.4■■■□□ 2.94
PCOLCE-210ENST00000496269 SLC52A1Q9NWF4 448 aa33.4■■■□□ 2.94
PCOLCE-210ENST00000496269 LTKP29376 864 aa33.37■■■□□ 2.93
PCOLCE-210ENST00000496269 IQSEC2Q5JU85 1478 aa33.35■■■□□ 2.93
PCOLCE-210ENST00000496269 STRCP1A6NGW2 1772 aa33.32■■■□□ 2.92
PCOLCE-210ENST00000496269 ZFYVE9O95405 1425 aa33.3■■■□□ 2.92
PCOLCE-210ENST00000496269 TXNDC2Q86VQ3 553 aa33.28■■■□□ 2.92
PCOLCE-210ENST00000496269 STAG3Q9UJ98 1225 aa33.27■■■□□ 2.92
PCOLCE-210ENST00000496269 TRPM2O94759 1503 aa33.27■■■□□ 2.92
PCOLCE-210ENST00000496269 CLTCL1P53675 1640 aa33.25■■■□□ 2.91
PCOLCE-210ENST00000496269 CPS1P31327 1500 aa33.25■■■□□ 2.91
PCOLCE-210ENST00000496269 EID1Q9Y6B2 187 aa33.21■■■□□ 2.91
PCOLCE-210ENST00000496269 RIMS2Q9UQ26 1411 aa33.19■■■□□ 2.9
PCOLCE-210ENST00000496269 TRIM52Q96A61 297 aa33.17■■■□□ 2.9
PCOLCE-210ENST00000496269 SETD5Q9C0A6 1442 aa33.15■■■□□ 2.9
PCOLCE-210ENST00000496269 KIF1BO60333 1816 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms