RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 KIF7Q2M1P5 1343 aa20.47■□□□□ 0.87
CHTOP-206ENST00000495554 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
CHTOP-206ENST00000495554 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
CHTOP-206ENST00000495554 RTEL1-TNFRSF6BF6WH68 1400 aa20.45■□□□□ 0.86
CHTOP-206ENST00000495554 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
CHTOP-206ENST00000495554 IQGAP3Q86VI3 1631 aa20.45■□□□□ 0.86
CHTOP-206ENST00000495554 POLR1AO95602 1720 aaPredicted RBP20.45■□□□□ 0.86
CHTOP-206ENST00000495554 FANCAO15360 1455 aa20.45■□□□□ 0.86
CHTOP-206ENST00000495554 USP47Q96K76 1375 aa20.44■□□□□ 0.86
CHTOP-206ENST00000495554 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
CHTOP-206ENST00000495554 DCAF11Q8TEB1 546 aa20.42■□□□□ 0.86
CHTOP-206ENST00000495554 KDM2AQ9Y2K7 1162 aa20.41■□□□□ 0.86
CHTOP-206ENST00000495554 ZFYVE16Q7Z3T8 1539 aa20.41■□□□□ 0.86
CHTOP-206ENST00000495554 RALGAPBQ86X10 1494 aa20.4■□□□□ 0.86
CHTOP-206ENST00000495554 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
CHTOP-206ENST00000495554 ARID4BQ4LE39 1312 aaPredicted RBP20.4■□□□□ 0.86
CHTOP-206ENST00000495554 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
CHTOP-206ENST00000495554 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
CHTOP-206ENST00000495554 KDM5CP41229 1560 aa20.38■□□□□ 0.85
CHTOP-206ENST00000495554 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
CHTOP-206ENST00000495554 ATP10AO60312 1499 aa20.37■□□□□ 0.85
CHTOP-206ENST00000495554 NEFLP07196 543 aa20.37■□□□□ 0.85
CHTOP-206ENST00000495554 FKBP8Q14318 412 aa20.37■□□□□ 0.85
CHTOP-206ENST00000495554 ADGRL1O94910 1474 aa20.36■□□□□ 0.85
CHTOP-206ENST00000495554 BCORL1Q5H9F3 1711 aa20.35■□□□□ 0.85
CHTOP-206ENST00000495554 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
CHTOP-206ENST00000495554 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
CHTOP-206ENST00000495554 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
CHTOP-206ENST00000495554 ATP7AQ04656 1500 aa20.34■□□□□ 0.85
CHTOP-206ENST00000495554 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
CHTOP-206ENST00000495554 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
CHTOP-206ENST00000495554 A2MP01023 1474 aa20.31■□□□□ 0.84
CHTOP-206ENST00000495554 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
CHTOP-206ENST00000495554 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
CHTOP-206ENST00000495554 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
CHTOP-206ENST00000495554 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
CHTOP-206ENST00000495554 DEPDC5O75140 1603 aa20.29■□□□□ 0.84
CHTOP-206ENST00000495554 E9PCH4 1651 aa20.27■□□□□ 0.84
CHTOP-206ENST00000495554 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
CHTOP-206ENST00000495554 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
CHTOP-206ENST00000495554 KIF3BO15066 747 aa20.26■□□□□ 0.83
CHTOP-206ENST00000495554 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
CHTOP-206ENST00000495554 BCANQ96GW7 911 aa20.26■□□□□ 0.83
CHTOP-206ENST00000495554 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
CHTOP-206ENST00000495554 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
CHTOP-206ENST00000495554 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
CHTOP-206ENST00000495554 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
CHTOP-206ENST00000495554 MYT1LQ9UL68 1186 aa20.25■□□□□ 0.83
CHTOP-206ENST00000495554 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
CHTOP-206ENST00000495554 PTPRTO14522 1441 aa20.24■□□□□ 0.83
CHTOP-206ENST00000495554 GPRASP1Q5JY77 1395 aa20.22■□□□□ 0.83
CHTOP-206ENST00000495554 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
CHTOP-206ENST00000495554 MROH1Q8NDA8 1641 aa20.21■□□□□ 0.83
CHTOP-206ENST00000495554 TET3O43151 1660 aa20.2■□□□□ 0.82
CHTOP-206ENST00000495554 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
CHTOP-206ENST00000495554 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
CHTOP-206ENST00000495554 TRPM2O94759 1503 aa20.19■□□□□ 0.82
CHTOP-206ENST00000495554 KANK1Q14678 1352 aa20.19■□□□□ 0.82
CHTOP-206ENST00000495554 PRDM15P57071 1507 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-206ENST00000495554 POGZQ7Z3K3 1410 aa20.17■□□□□ 0.82
CHTOP-206ENST00000495554 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
CHTOP-206ENST00000495554 CFAP74Q9C0B2 1584 aa20.15■□□□□ 0.82
CHTOP-206ENST00000495554 TSHZ2Q9NRE2 1034 aa20.15■□□□□ 0.82
CHTOP-206ENST00000495554 MLH3Q9UHC1 1453 aa20.15■□□□□ 0.82
CHTOP-206ENST00000495554 CLTCL1P53675 1640 aa20.14■□□□□ 0.81
CHTOP-206ENST00000495554 LAMC1P11047 1609 aa20.13■□□□□ 0.81
CHTOP-206ENST00000495554 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
CHTOP-206ENST00000495554 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
CHTOP-206ENST00000495554 CEP152O94986 1710 aa20.12■□□□□ 0.81
CHTOP-206ENST00000495554 TESK2Q96S53 571 aa20.11■□□□□ 0.81
CHTOP-206ENST00000495554 NEO1Q92859 1461 aa20.1■□□□□ 0.81
CHTOP-206ENST00000495554 FRMPD1Q5SYB0 1578 aa20.1■□□□□ 0.81
CHTOP-206ENST00000495554 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
CHTOP-206ENST00000495554 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-206ENST00000495554 ERICH6BQ5W0A0 696 aa20.08■□□□□ 0.81
CHTOP-206ENST00000495554 RALBP1Q15311 655 aa20.08■□□□□ 0.8
CHTOP-206ENST00000495554 STAC3Q96MF2 364 aa20.08■□□□□ 0.8
CHTOP-206ENST00000495554 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.8
CHTOP-206ENST00000495554 MADDQ8WXG6 1647 aa20.07■□□□□ 0.8
CHTOP-206ENST00000495554 HECW2Q9P2P5 1572 aa20.07■□□□□ 0.8
CHTOP-206ENST00000495554 EFCAB6Q5THR3 1501 aa20.07■□□□□ 0.8
CHTOP-206ENST00000495554 RNF17Q9BXT8 1623 aaKnown RBP20.07■□□□□ 0.8
CHTOP-206ENST00000495554 TMC1Q8TDI8 760 aa20.06■□□□□ 0.8
CHTOP-206ENST00000495554 PPRC1Q5VV67 1664 aaKnown RBP20.06■□□□□ 0.8
CHTOP-206ENST00000495554 UGGT1Q9NYU2 1555 aa20.05■□□□□ 0.8
CHTOP-206ENST00000495554 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
CHTOP-206ENST00000495554 ABCA6Q8N139 1617 aa20.04■□□□□ 0.8
CHTOP-206ENST00000495554 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
CHTOP-206ENST00000495554 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
CHTOP-206ENST00000495554 BRD4O60885 1362 aaPredicted RBP20.03■□□□□ 0.8
CHTOP-206ENST00000495554 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
CHTOP-206ENST00000495554 COL17A1Q9UMD9 1497 aaPredicted RBP20.03■□□□□ 0.8
CHTOP-206ENST00000495554 GGT6Q6P531 493 aa20.03■□□□□ 0.8
CHTOP-206ENST00000495554 MAP3K4Q9Y6R4 1608 aa20.03■□□□□ 0.8
CHTOP-206ENST00000495554 RIMBP3CA6NJZ7 1639 aa20.02■□□□□ 0.8
CHTOP-206ENST00000495554 RIMBP3BA6NNM3 1639 aa20.02■□□□□ 0.8
CHTOP-206ENST00000495554 RIMBP3Q9UFD9 1639 aa20.02■□□□□ 0.8
CHTOP-206ENST00000495554 PER1O15534 1290 aaPredicted RBP20■□□□□ 0.79
CHTOP-206ENST00000495554 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
CHTOP-206ENST00000495554 GLI2P10070 1586 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms