RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.333e-20■■■■□ 24.3
CHTOP-206ENST00000495554 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.222e-14■■■□□ 18.7
CHTOP-206ENST00000495554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.35□□□□□ -0.592e-13■■■■□ 21.6
CHTOP-206ENST00000495554 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.667e-13■■■■■ 32.8
CHTOP-206ENST00000495554 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.2□□□□□ -0.143e-11■■□□□ 12.7
CHTOP-206ENST00000495554 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.131e-10■■□□□ 12.9
CHTOP-206ENST00000495554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.874e-10■□□□□ 9.2
CHTOP-206ENST00000495554 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.164e-10■□□□□ 9.1
CHTOP-206ENST00000495554 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.051e-9■□□□□ 11.3
CHTOP-206ENST00000495554 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.152e-9■■■■□ 19.3
CHTOP-206ENST00000495554 DDX6P26196 483 aaKnown RBP eCLIP14.43□□□□□ -0.12e-9■■□□□ 12.3
CHTOP-206ENST00000495554 PPIGQ13427 754 aaKnown RBP eCLIP14.44□□□□□ -0.14e-9■□□□□ 9.6
CHTOP-206ENST00000495554 AQRO60306 1485 aaKnown RBP eCLIP22.07■■□□□ 1.125e-9■■■■■ 42.9
CHTOP-206ENST00000495554 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.051e-8■■■■□ 26.2
CHTOP-206ENST00000495554 FUSP35637 526 aaKnown RBP eCLIP9.37□□□□□ -0.911e-8■■■□□ 16.9
CHTOP-206ENST00000495554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.89■□□□□ 0.136e-8■■■■■ 32.4
CHTOP-206ENST00000495554 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.939e-8■■■■■ 28.7
CHTOP-206ENST00000495554 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■□□□□ 8.6
CHTOP-206ENST00000495554 UPF1Q92900 1129 aaKnown RBP eCLIP15.94■□□□□ 0.143e-7■□□□□ 9.9
CHTOP-206ENST00000495554 TIA1P31483 386 aaKnown RBP eCLIP14.24□□□□□ -0.133e-7■■□□□ 13.8
CHTOP-206ENST00000495554 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.24e-7■■□□□ 12.7
CHTOP-206ENST00000495554 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.325e-7■■□□□ 12
CHTOP-206ENST00000495554 EIF3HO15372 352 aaKnown RBP eCLIP15.85■□□□□ 0.138e-7■■■■■ 40.7
CHTOP-206ENST00000495554 PTBP1P26599 531 aaKnown RBP eCLIP13.6□□□□□ -0.239e-7■■□□□ 13.8
CHTOP-206ENST00000495554 RBM15Q96T37 977 aaKnown RBP eCLIP15.57■□□□□ 0.081e-6■■■■□ 23.8
CHTOP-206ENST00000495554 QKIQ96PU8 341 aaKnown RBP eCLIP15.3■□□□□ 0.041e-6■■□□□ 14.3
CHTOP-206ENST00000495554 RPS3P23396 243 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■■□□□ 11.8
CHTOP-206ENST00000495554 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.355e-6■■□□□ 12.5
CHTOP-206ENST00000495554 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.737e-6■■■■■ 27.3
CHTOP-206ENST00000495554 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.078e-6■■□□□ 11.8
Retrieved 30 of 30 RNA–protein pairs in 22.5 ms