RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 ZNF142P52746 1687 aaPredicted RBP20.78■□□□□ 0.92
RBM28-208ENST00000495327 ZMYM3Q14202 1370 aa20.78■□□□□ 0.92
RBM28-208ENST00000495327 GGT6Q6P531 493 aa20.77■□□□□ 0.92
RBM28-208ENST00000495327 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.92
RBM28-208ENST00000495327 MROH1Q8NDA8 1641 aa20.75■□□□□ 0.91
RBM28-208ENST00000495327 KIF3BO15066 747 aa20.74■□□□□ 0.91
RBM28-208ENST00000495327 PTPRKQ15262 1439 aa20.74■□□□□ 0.91
RBM28-208ENST00000495327 STRCQ7RTU9 1775 aa20.73■□□□□ 0.91
RBM28-208ENST00000495327 HSPA2P54652 639 aa20.73■□□□□ 0.91
RBM28-208ENST00000495327 DEPDC5O75140 1603 aa20.71■□□□□ 0.91
RBM28-208ENST00000495327 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
RBM28-208ENST00000495327 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
RBM28-208ENST00000495327 KIF15Q9NS87 1388 aa20.71■□□□□ 0.91
RBM28-208ENST00000495327 ADGRL2O95490 1459 aa20.7■□□□□ 0.9
RBM28-208ENST00000495327 PZPP20742 1482 aa20.7■□□□□ 0.9
RBM28-208ENST00000495327 CEP152O94986 1710 aa20.7■□□□□ 0.9
RBM28-208ENST00000495327 ABCC3O15438 1527 aa20.69■□□□□ 0.9
RBM28-208ENST00000495327 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
RBM28-208ENST00000495327 CAMSAP1Q5T5Y3 1602 aa20.67■□□□□ 0.9
RBM28-208ENST00000495327 ANKRD30AQ9BXX3 1397 aa20.64■□□□□ 0.89
RBM28-208ENST00000495327 NCOA1Q15788 1441 aa20.63■□□□□ 0.89
RBM28-208ENST00000495327 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
RBM28-208ENST00000495327 A2ML1A8K2U0 1454 aa20.61■□□□□ 0.89
RBM28-208ENST00000495327 SPATA31D1Q6ZQQ2 1576 aa20.6■□□□□ 0.89
RBM28-208ENST00000495327 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
RBM28-208ENST00000495327 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
RBM28-208ENST00000495327 RRP7BPQ9NSQ0 103 aa20.59■□□□□ 0.89
RBM28-208ENST00000495327 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
RBM28-208ENST00000495327 TNRQ92752 1358 aa20.59■□□□□ 0.89
RBM28-208ENST00000495327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.58■□□□□ 0.88
RBM28-208ENST00000495327 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
RBM28-208ENST00000495327 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
RBM28-208ENST00000495327 PTPRTO14522 1441 aa20.56■□□□□ 0.88
RBM28-208ENST00000495327 LMTK2Q8IWU2 1503 aa20.56■□□□□ 0.88
RBM28-208ENST00000495327 ARHGAP31Q2M1Z3 1444 aa20.55■□□□□ 0.88
RBM28-208ENST00000495327 CHIC2Q9UKJ5 165 aa20.55■□□□□ 0.88
RBM28-208ENST00000495327 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
RBM28-208ENST00000495327 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
RBM28-208ENST00000495327 FBXO31Q5XUX0 539 aaPredicted RBP20.53■□□□□ 0.88
RBM28-208ENST00000495327 CFAP65Q6ZU64 1925 aaKnown RBP20.53■□□□□ 0.88
RBM28-208ENST00000495327 UNC13BO14795 1591 aa20.52■□□□□ 0.88
RBM28-208ENST00000495327 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
RBM28-208ENST00000495327 ANKRD50Q9ULJ7 1429 aa20.52■□□□□ 0.87
RBM28-208ENST00000495327 KANK1Q14678 1352 aa20.51■□□□□ 0.87
RBM28-208ENST00000495327 EFCAB6Q5THR3 1501 aa20.5■□□□□ 0.87
RBM28-208ENST00000495327 RRBP1Q9P2E9 1410 aaKnown RBP20.5■□□□□ 0.87
RBM28-208ENST00000495327 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
RBM28-208ENST00000495327 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
RBM28-208ENST00000495327 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
RBM28-208ENST00000495327 TET3O43151 1660 aa20.47■□□□□ 0.87
RBM28-208ENST00000495327 GCC2Q8IWJ2 1684 aa20.47■□□□□ 0.87
RBM28-208ENST00000495327 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
RBM28-208ENST00000495327 KDM5AP29375 1690 aaKnown RBP20.45■□□□□ 0.86
RBM28-208ENST00000495327 PKD2Q13563 968 aa20.44■□□□□ 0.86
RBM28-208ENST00000495327 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
RBM28-208ENST00000495327 ILDR1Q86SU0 546 aaPredicted RBP20.43■□□□□ 0.86
RBM28-208ENST00000495327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
RBM28-208ENST00000495327 SYNMO15061 1565 aa20.42■□□□□ 0.86
RBM28-208ENST00000495327 LTBP4Q8N2S1 1624 aa20.42■□□□□ 0.86
RBM28-208ENST00000495327 RPRD2Q5VT52 1461 aaKnown RBP20.41■□□□□ 0.86
RBM28-208ENST00000495327 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
RBM28-208ENST00000495327 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
RBM28-208ENST00000495327 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
RBM28-208ENST00000495327 FBXO41Q8TF61 875 aa20.38■□□□□ 0.85
RBM28-208ENST00000495327 MED14O60244 1454 aa20.37■□□□□ 0.85
RBM28-208ENST00000495327 NOS1P29475 1434 aa20.37■□□□□ 0.85
RBM28-208ENST00000495327 IQGAP1P46940 1657 aa20.37■□□□□ 0.85
RBM28-208ENST00000495327 E9PCH4 1651 aa20.36■□□□□ 0.85
RBM28-208ENST00000495327 CERKQ8TCT0 537 aa20.36■□□□□ 0.85
RBM28-208ENST00000495327 SLIT1O75093 1534 aa20.36■□□□□ 0.85
RBM28-208ENST00000495327 IQSEC2Q5JU85 1478 aa20.35■□□□□ 0.85
RBM28-208ENST00000495327 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
RBM28-208ENST00000495327 ADGRB3O60242 1522 aa20.33■□□□□ 0.85
RBM28-208ENST00000495327 ITGAEP38570 1179 aa20.33■□□□□ 0.85
RBM28-208ENST00000495327 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
RBM28-208ENST00000495327 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
RBM28-208ENST00000495327 SCAF11Q99590 1463 aaKnown RBP20.3■□□□□ 0.84
RBM28-208ENST00000495327 MYO5BQ9ULV0 1848 aa20.29■□□□□ 0.84
RBM28-208ENST00000495327 NAIPQ13075 1403 aa20.28■□□□□ 0.84
RBM28-208ENST00000495327 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.83
RBM28-208ENST00000495327 SPHKAPQ2M3C7 1700 aa20.26■□□□□ 0.83
RBM28-208ENST00000495327 CPS1P31327 1500 aa20.26■□□□□ 0.83
RBM28-208ENST00000495327 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
RBM28-208ENST00000495327 NUP155O75694 1391 aa20.25■□□□□ 0.83
RBM28-208ENST00000495327 TMEM131LA2VDJ0 1609 aa20.24■□□□□ 0.83
RBM28-208ENST00000495327 SLC52A1Q9NWF4 448 aa20.24■□□□□ 0.83
RBM28-208ENST00000495327 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
RBM28-208ENST00000495327 IDI1Q13907 227 aa20.23■□□□□ 0.83
RBM28-208ENST00000495327 STRCP1A6NGW2 1772 aa20.21■□□□□ 0.83
RBM28-208ENST00000495327 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
RBM28-208ENST00000495327 LTKP29376 864 aa20.17■□□□□ 0.82
RBM28-208ENST00000495327 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
RBM28-208ENST00000495327 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
RBM28-208ENST00000495327 TXNDC2Q86VQ3 553 aa20.15■□□□□ 0.82
RBM28-208ENST00000495327 TRPM2O94759 1503 aa20.14■□□□□ 0.81
RBM28-208ENST00000495327 CLTCL1P53675 1640 aa20.11■□□□□ 0.81
RBM28-208ENST00000495327 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
RBM28-208ENST00000495327 KIF1BO60333 1816 aa20.1■□□□□ 0.81
RBM28-208ENST00000495327 XIRP1Q702N8 1843 aaKnown RBP20.09■□□□□ 0.81
RBM28-208ENST00000495327 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms