RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 MROH2AA6NES4 1674 aa16.11■□□□□ 0.17
TRAPPC12-222ENST00000493792 A2MP01023 1474 aa16.11■□□□□ 0.17
TRAPPC12-222ENST00000493792 PLXNC1O60486 1568 aa16.1■□□□□ 0.17
TRAPPC12-222ENST00000493792 FBXO31Q5XUX0 539 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC12-222ENST00000493792 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
TRAPPC12-222ENST00000493792 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC12-222ENST00000493792 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
TRAPPC12-222ENST00000493792 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
TRAPPC12-222ENST00000493792 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
TRAPPC12-222ENST00000493792 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
TRAPPC12-222ENST00000493792 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
TRAPPC12-222ENST00000493792 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
TRAPPC12-222ENST00000493792 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
TRAPPC12-222ENST00000493792 PTPN23Q9H3S7 1636 aa16.06■□□□□ 0.16
TRAPPC12-222ENST00000493792 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC12-222ENST00000493792 SHANK2Q9UPX8 1470 aa16.06■□□□□ 0.16
TRAPPC12-222ENST00000493792 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
TRAPPC12-222ENST00000493792 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
TRAPPC12-222ENST00000493792 ARHGEF5Q12774 1597 aa16.05■□□□□ 0.16
TRAPPC12-222ENST00000493792 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
TRAPPC12-222ENST00000493792 ZNF142P52746 1687 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC12-222ENST00000493792 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
TRAPPC12-222ENST00000493792 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
TRAPPC12-222ENST00000493792 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
TRAPPC12-222ENST00000493792 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
TRAPPC12-222ENST00000493792 CPS1P31327 1500 aa16.02■□□□□ 0.15
TRAPPC12-222ENST00000493792 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.15
TRAPPC12-222ENST00000493792 TNRQ92752 1358 aa16.01■□□□□ 0.15
TRAPPC12-222ENST00000493792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
TRAPPC12-222ENST00000493792 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
TRAPPC12-222ENST00000493792 RGS17Q9UGC6 210 aaPredicted RBP16■□□□□ 0.15
TRAPPC12-222ENST00000493792 ALKQ9UM73 1620 aa16■□□□□ 0.15
TRAPPC12-222ENST00000493792 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
TRAPPC12-222ENST00000493792 KIF3BO15066 747 aa15.99■□□□□ 0.15
TRAPPC12-222ENST00000493792 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC12-222ENST00000493792 VWDEQ8N2E2 1590 aa15.96■□□□□ 0.15
TRAPPC12-222ENST00000493792 ABCC5O15440 1437 aa15.96■□□□□ 0.15
TRAPPC12-222ENST00000493792 DAPK1P53355 1430 aa15.96■□□□□ 0.15
TRAPPC12-222ENST00000493792 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
TRAPPC12-222ENST00000493792 MED14O60244 1454 aa15.96■□□□□ 0.14
TRAPPC12-222ENST00000493792 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.14
TRAPPC12-222ENST00000493792 WASHC2CQ9Y4E1 1318 aa15.95■□□□□ 0.14
TRAPPC12-222ENST00000493792 CROCC2H7BZ55 1655 aa15.95■□□□□ 0.14
TRAPPC12-222ENST00000493792 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC12-222ENST00000493792 PZPP20742 1482 aa15.94■□□□□ 0.14
TRAPPC12-222ENST00000493792 FAM135AQ9P2D6 1515 aa15.93■□□□□ 0.14
TRAPPC12-222ENST00000493792 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC12-222ENST00000493792 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
TRAPPC12-222ENST00000493792 ITGAEP38570 1179 aa15.91■□□□□ 0.14
TRAPPC12-222ENST00000493792 KIF15Q9NS87 1388 aa15.9■□□□□ 0.14
TRAPPC12-222ENST00000493792 LRRC7Q96NW7 1537 aa15.9■□□□□ 0.14
TRAPPC12-222ENST00000493792 KDM5DQ9BY66 1539 aa15.9■□□□□ 0.14
TRAPPC12-222ENST00000493792 ANKRD30AQ9BXX3 1397 aa15.89■□□□□ 0.13
TRAPPC12-222ENST00000493792 NLRP1Q9C000 1473 aa15.89■□□□□ 0.13
TRAPPC12-222ENST00000493792 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
TRAPPC12-222ENST00000493792 UGGT1Q9NYU2 1555 aa15.87■□□□□ 0.13
TRAPPC12-222ENST00000493792 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
TRAPPC12-222ENST00000493792 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
TRAPPC12-222ENST00000493792 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC12-222ENST00000493792 LTKP29376 864 aa15.84■□□□□ 0.13
TRAPPC12-222ENST00000493792 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.13
TRAPPC12-222ENST00000493792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.124e-9■□□□□ 9.3
TRAPPC12-222ENST00000493792 ERBINQ96RT1 1412 aa15.82■□□□□ 0.12
TRAPPC12-222ENST00000493792 RNF17Q9BXT8 1623 aaKnown RBP15.82■□□□□ 0.12
TRAPPC12-222ENST00000493792 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
TRAPPC12-222ENST00000493792 ABCC3O15438 1527 aa15.81■□□□□ 0.12
TRAPPC12-222ENST00000493792 ADGRL2O95490 1459 aa15.81■□□□□ 0.12
TRAPPC12-222ENST00000493792 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
TRAPPC12-222ENST00000493792 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
TRAPPC12-222ENST00000493792 FAM135BQ49AJ0 1406 aa15.78■□□□□ 0.12
TRAPPC12-222ENST00000493792 IQGAP1P46940 1657 aa15.77■□□□□ 0.12
TRAPPC12-222ENST00000493792 MROH1Q8NDA8 1641 aa15.77■□□□□ 0.12
TRAPPC12-222ENST00000493792 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.11
TRAPPC12-222ENST00000493792 KANK1Q14678 1352 aa15.76■□□□□ 0.11
TRAPPC12-222ENST00000493792 ZC3H13Q5T200 1668 aaKnown RBP15.76■□□□□ 0.11
TRAPPC12-222ENST00000493792 CEP152O94986 1710 aa15.75■□□□□ 0.11
TRAPPC12-222ENST00000493792 ERVK-7P63135 1459 aa15.75■□□□□ 0.11
TRAPPC12-222ENST00000493792 ROCK1Q13464 1354 aa15.75■□□□□ 0.11
TRAPPC12-222ENST00000493792 SCAF11Q99590 1463 aaKnown RBP15.73■□□□□ 0.11
TRAPPC12-222ENST00000493792 ARHGAP23Q9P227 1491 aa15.73■□□□□ 0.11
TRAPPC12-222ENST00000493792 ARHGAP31Q2M1Z3 1444 aa15.73■□□□□ 0.11
TRAPPC12-222ENST00000493792 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC12-222ENST00000493792 SYNMO15061 1565 aa15.71■□□□□ 0.11
TRAPPC12-222ENST00000493792 KCNA6P17658 529 aa15.7■□□□□ 0.1
TRAPPC12-222ENST00000493792 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
TRAPPC12-222ENST00000493792 TMEM94Q12767 1356 aa15.7■□□□□ 0.1
TRAPPC12-222ENST00000493792 SLIT1O75093 1534 aa15.69■□□□□ 0.1
TRAPPC12-222ENST00000493792 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
TRAPPC12-222ENST00000493792 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
TRAPPC12-222ENST00000493792 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
TRAPPC12-222ENST00000493792 IDI1Q13907 227 aa15.66■□□□□ 0.1
TRAPPC12-222ENST00000493792 PROSER2Q86WR7 435 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC12-222ENST00000493792 LMTK2Q8IWU2 1503 aa15.65■□□□□ 0.1
TRAPPC12-222ENST00000493792 SLC26A8Q96RN1 970 aa15.65■□□□□ 0.1
TRAPPC12-222ENST00000493792 UBR1Q8IWV7 1749 aa15.65■□□□□ 0.1
TRAPPC12-222ENST00000493792 XIRP1Q702N8 1843 aaKnown RBP15.64■□□□□ 0.09
TRAPPC12-222ENST00000493792 UNC13BO14795 1591 aa15.64■□□□□ 0.09
TRAPPC12-222ENST00000493792 NUP155O75694 1391 aa15.63■□□□□ 0.09
TRAPPC12-222ENST00000493792 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
TRAPPC12-222ENST00000493792 GCC2Q8IWJ2 1684 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms