RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDC42SE1-206ENST00000492796 KIF3BO15066 747 aa16.39■□□□□ 0.21
CDC42SE1-206ENST00000492796 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.21
CDC42SE1-206ENST00000492796 ZC3H13Q5T200 1668 aaKnown RBP16.39■□□□□ 0.21
CDC42SE1-206ENST00000492796 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
CDC42SE1-206ENST00000492796 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
CDC42SE1-206ENST00000492796 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
CDC42SE1-206ENST00000492796 CEBPAP49715 358 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE1-206ENST00000492796 MROH1Q8NDA8 1641 aa16.36■□□□□ 0.21
CDC42SE1-206ENST00000492796 ZMYM3Q14202 1370 aa16.36■□□□□ 0.21
CDC42SE1-206ENST00000492796 NPATQ14207 1427 aa16.36■□□□□ 0.21
CDC42SE1-206ENST00000492796 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
CDC42SE1-206ENST00000492796 DEPDC5O75140 1603 aa16.35■□□□□ 0.21
CDC42SE1-206ENST00000492796 RRBP1Q9P2E9 1410 aaKnown RBP16.35■□□□□ 0.21
CDC42SE1-206ENST00000492796 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
CDC42SE1-206ENST00000492796 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
CDC42SE1-206ENST00000492796 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
CDC42SE1-206ENST00000492796 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
CDC42SE1-206ENST00000492796 ABCC3O15438 1527 aa16.32■□□□□ 0.2
CDC42SE1-206ENST00000492796 PTPRKQ15262 1439 aa16.31■□□□□ 0.2
CDC42SE1-206ENST00000492796 ROCK1Q13464 1354 aa16.31■□□□□ 0.2
CDC42SE1-206ENST00000492796 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
CDC42SE1-206ENST00000492796 PZPP20742 1482 aa16.3■□□□□ 0.2
CDC42SE1-206ENST00000492796 CEP152O94986 1710 aa16.3■□□□□ 0.2
CDC42SE1-206ENST00000492796 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
CDC42SE1-206ENST00000492796 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
CDC42SE1-206ENST00000492796 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
CDC42SE1-206ENST00000492796 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
CDC42SE1-206ENST00000492796 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
CDC42SE1-206ENST00000492796 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
CDC42SE1-206ENST00000492796 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
CDC42SE1-206ENST00000492796 KANK1Q14678 1352 aa16.26■□□□□ 0.19
CDC42SE1-206ENST00000492796 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
CDC42SE1-206ENST00000492796 UNC13BO14795 1591 aa16.24■□□□□ 0.19
CDC42SE1-206ENST00000492796 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
CDC42SE1-206ENST00000492796 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
CDC42SE1-206ENST00000492796 ARHGAP31Q2M1Z3 1444 aa16.22■□□□□ 0.19
CDC42SE1-206ENST00000492796 ITGAEP38570 1179 aa16.22■□□□□ 0.19
CDC42SE1-206ENST00000492796 HSPA2P54652 639 aa16.22■□□□□ 0.19
CDC42SE1-206ENST00000492796 TNRQ92752 1358 aa16.22■□□□□ 0.19
CDC42SE1-206ENST00000492796 GCC2Q8IWJ2 1684 aa16.21■□□□□ 0.19
CDC42SE1-206ENST00000492796 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
CDC42SE1-206ENST00000492796 ERVK-7P63135 1459 aa16.2■□□□□ 0.18
CDC42SE1-206ENST00000492796 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
CDC42SE1-206ENST00000492796 NLRP1Q9C000 1473 aa16.19■□□□□ 0.18
CDC42SE1-206ENST00000492796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.184e-8■■□□□ 14.5
CDC42SE1-206ENST00000492796 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
CDC42SE1-206ENST00000492796 TET3O43151 1660 aa16.18■□□□□ 0.18
CDC42SE1-206ENST00000492796 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE1-206ENST00000492796 IQGAP3Q86VI3 1631 aa16.17■□□□□ 0.18
CDC42SE1-206ENST00000492796 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
CDC42SE1-206ENST00000492796 RPRD2Q5VT52 1461 aaKnown RBP16.15■□□□□ 0.18
CDC42SE1-206ENST00000492796 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
CDC42SE1-206ENST00000492796 NAIPQ13075 1403 aa16.13■□□□□ 0.17
CDC42SE1-206ENST00000492796 CFAP65Q6ZU64 1925 aaKnown RBP16.13■□□□□ 0.17
CDC42SE1-206ENST00000492796 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
CDC42SE1-206ENST00000492796 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
CDC42SE1-206ENST00000492796 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
CDC42SE1-206ENST00000492796 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
CDC42SE1-206ENST00000492796 UBR1Q8IWV7 1749 aa16.1■□□□□ 0.17
CDC42SE1-206ENST00000492796 PTPRTO14522 1441 aa16.1■□□□□ 0.17
CDC42SE1-206ENST00000492796 SYNMO15061 1565 aa16.09■□□□□ 0.17
CDC42SE1-206ENST00000492796 E9PCH4 1651 aa16.09■□□□□ 0.17
CDC42SE1-206ENST00000492796 NUP155O75694 1391 aa16.09■□□□□ 0.17
CDC42SE1-206ENST00000492796 NOS1P29475 1434 aa16.09■□□□□ 0.17
CDC42SE1-206ENST00000492796 PKD2Q13563 968 aa16.07■□□□□ 0.16
CDC42SE1-206ENST00000492796 PIK3C2BO00750 1634 aa16.07■□□□□ 0.16
CDC42SE1-206ENST00000492796 THEMISQ8N1K5 641 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE1-206ENST00000492796 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
CDC42SE1-206ENST00000492796 ADGRB3O60242 1522 aa16.03■□□□□ 0.16
CDC42SE1-206ENST00000492796 NCKAP5LQ9HCH0 1330 aa16.02■□□□□ 0.16
CDC42SE1-206ENST00000492796 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
CDC42SE1-206ENST00000492796 SLIT1O75093 1534 aa16.02■□□□□ 0.15
CDC42SE1-206ENST00000492796 SPHKAPQ2M3C7 1700 aa16.01■□□□□ 0.15
CDC42SE1-206ENST00000492796 MED14O60244 1454 aa16.01■□□□□ 0.15
CDC42SE1-206ENST00000492796 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
CDC42SE1-206ENST00000492796 IDI1Q13907 227 aa15.99■□□□□ 0.15
CDC42SE1-206ENST00000492796 ANKLE2Q86XL3 938 aa15.99■□□□□ 0.15
CDC42SE1-206ENST00000492796 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
CDC42SE1-206ENST00000492796 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
CDC42SE1-206ENST00000492796 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
CDC42SE1-206ENST00000492796 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
CDC42SE1-206ENST00000492796 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
CDC42SE1-206ENST00000492796 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
CDC42SE1-206ENST00000492796 TMEM2Q9UHN6 1383 aa15.96■□□□□ 0.15
CDC42SE1-206ENST00000492796 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
CDC42SE1-206ENST00000492796 TRPM2O94759 1503 aa15.95■□□□□ 0.14
CDC42SE1-206ENST00000492796 TRIM52Q96A61 297 aa15.95■□□□□ 0.14
CDC42SE1-206ENST00000492796 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
CDC42SE1-206ENST00000492796 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
CDC42SE1-206ENST00000492796 ILDR2Q71H61 639 aa15.92■□□□□ 0.14
CDC42SE1-206ENST00000492796 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
CDC42SE1-206ENST00000492796 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
CDC42SE1-206ENST00000492796 CLTCL1P53675 1640 aa15.9■□□□□ 0.14
CDC42SE1-206ENST00000492796 TXNDC2Q86VQ3 553 aa15.9■□□□□ 0.14
CDC42SE1-206ENST00000492796 ZFYVE9O95405 1425 aa15.9■□□□□ 0.14
CDC42SE1-206ENST00000492796 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
CDC42SE1-206ENST00000492796 LTKP29376 864 aa15.89■□□□□ 0.13
CDC42SE1-206ENST00000492796 CERKQ8TCT0 537 aa15.89■□□□□ 0.13
CDC42SE1-206ENST00000492796 RAB3GAP2Q9H2M9 1393 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms