RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
CDC42SE1-205ENST00000491825 MYOM3Q5VTT5 1437 aa23.47■■□□□ 1.35
CDC42SE1-205ENST00000491825 MIA2Q96PC5 1412 aa23.47■■□□□ 1.35
CDC42SE1-205ENST00000491825 MAST1Q9Y2H9 1570 aa23.47■■□□□ 1.35
CDC42SE1-205ENST00000491825 PZPP20742 1482 aa23.46■■□□□ 1.35
CDC42SE1-205ENST00000491825 A2ML1A8K2U0 1454 aa23.45■■□□□ 1.34
CDC42SE1-205ENST00000491825 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
CDC42SE1-205ENST00000491825 APLP2Q06481 763 aa23.45■■□□□ 1.34
CDC42SE1-205ENST00000491825 TSPY4P0CV99 314 aa23.44■■□□□ 1.34
CDC42SE1-205ENST00000491825 TSPY10P0CW01 314 aa23.44■■□□□ 1.34
CDC42SE1-205ENST00000491825 PKD2Q13563 968 aa23.42■■□□□ 1.34
CDC42SE1-205ENST00000491825 TNRQ92752 1358 aa23.41■■□□□ 1.34
CDC42SE1-205ENST00000491825 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
CDC42SE1-205ENST00000491825 FBXO31Q5XUX0 539 aaPredicted RBP23.41■■□□□ 1.34
CDC42SE1-205ENST00000491825 IQSEC2Q5JU85 1478 aa23.41■■□□□ 1.34
CDC42SE1-205ENST00000491825 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
CDC42SE1-205ENST00000491825 WASHC2CQ9Y4E1 1318 aa23.39■■□□□ 1.34
CDC42SE1-205ENST00000491825 ZNF335Q9H4Z2 1342 aaPredicted RBP23.36■■□□□ 1.33
CDC42SE1-205ENST00000491825 EIF2AK4Q9P2K8 1649 aaKnown RBP23.36■■□□□ 1.33
CDC42SE1-205ENST00000491825 ABCC3O15438 1527 aa23.35■■□□□ 1.33
CDC42SE1-205ENST00000491825 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
CDC42SE1-205ENST00000491825 NEURL4Q96JN8 1562 aa23.32■■□□□ 1.32
CDC42SE1-205ENST00000491825 NLRP1Q9C000 1473 aa23.32■■□□□ 1.32
CDC42SE1-205ENST00000491825 SHANK2Q9UPX8 1470 aa23.32■■□□□ 1.32
CDC42SE1-205ENST00000491825 DUOX2Q9NRD8 1548 aa23.31■■□□□ 1.32
CDC42SE1-205ENST00000491825 ABCC5O15440 1437 aa23.31■■□□□ 1.32
CDC42SE1-205ENST00000491825 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
CDC42SE1-205ENST00000491825 SPATA31D1Q6ZQQ2 1576 aa23.29■■□□□ 1.32
CDC42SE1-205ENST00000491825 PTPN23Q9H3S7 1636 aa23.28■■□□□ 1.32
CDC42SE1-205ENST00000491825 FGD6Q6ZV73 1430 aa23.27■■□□□ 1.32
CDC42SE1-205ENST00000491825 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
CDC42SE1-205ENST00000491825 KIF15Q9NS87 1388 aa23.27■■□□□ 1.31
CDC42SE1-205ENST00000491825 CROCC2H7BZ55 1655 aa23.26■■□□□ 1.31
CDC42SE1-205ENST00000491825 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
CDC42SE1-205ENST00000491825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.26■■□□□ 1.31
CDC42SE1-205ENST00000491825 POLR1AO95602 1720 aaPredicted RBP23.25■■□□□ 1.31
CDC42SE1-205ENST00000491825 DAPK1P53355 1430 aa23.25■■□□□ 1.31
CDC42SE1-205ENST00000491825 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
CDC42SE1-205ENST00000491825 PRDM15P57071 1507 aaPredicted RBP23.24■■□□□ 1.31
CDC42SE1-205ENST00000491825 THEMISQ8N1K5 641 aaPredicted RBP23.22■■□□□ 1.31
CDC42SE1-205ENST00000491825 MED14O60244 1454 aa23.22■■□□□ 1.31
CDC42SE1-205ENST00000491825 ANKLE2Q86XL3 938 aa23.2■■□□□ 1.3
CDC42SE1-205ENST00000491825 CEP152O94986 1710 aa23.19■■□□□ 1.3
CDC42SE1-205ENST00000491825 DEPDC5O75140 1603 aa23.19■■□□□ 1.3
CDC42SE1-205ENST00000491825 ARHGAP31Q2M1Z3 1444 aa23.19■■□□□ 1.3
CDC42SE1-205ENST00000491825 RRP7BPQ9NSQ0 103 aa23.18■■□□□ 1.3
CDC42SE1-205ENST00000491825 NPHP4O75161 1426 aaPredicted RBP23.17■■□□□ 1.3
CDC42SE1-205ENST00000491825 VWDEQ8N2E2 1590 aa23.17■■□□□ 1.3
CDC42SE1-205ENST00000491825 CPS1P31327 1500 aa23.16■■□□□ 1.3
CDC42SE1-205ENST00000491825 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
CDC42SE1-205ENST00000491825 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
CDC42SE1-205ENST00000491825 LMTK2Q8IWU2 1503 aa23.11■■□□□ 1.29
CDC42SE1-205ENST00000491825 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
CDC42SE1-205ENST00000491825 UBR1Q8IWV7 1749 aa23.11■■□□□ 1.29
CDC42SE1-205ENST00000491825 IQGAP1P46940 1657 aa23.1■■□□□ 1.29
CDC42SE1-205ENST00000491825 DISP3Q9P2K9 1392 aa23.1■■□□□ 1.29
CDC42SE1-205ENST00000491825 CHIC2Q9UKJ5 165 aa23.09■■□□□ 1.29
CDC42SE1-205ENST00000491825 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
CDC42SE1-205ENST00000491825 SLIT1O75093 1534 aa23.08■■□□□ 1.28
CDC42SE1-205ENST00000491825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.06■■□□□ 1.28
CDC42SE1-205ENST00000491825 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
CDC42SE1-205ENST00000491825 KANK1Q14678 1352 aa23.05■■□□□ 1.28
CDC42SE1-205ENST00000491825 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
CDC42SE1-205ENST00000491825 ALKQ9UM73 1620 aa23.02■■□□□ 1.28
CDC42SE1-205ENST00000491825 LTKP29376 864 aa23.02■■□□□ 1.28
CDC42SE1-205ENST00000491825 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
CDC42SE1-205ENST00000491825 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
CDC42SE1-205ENST00000491825 PIK3C2BO00750 1634 aa23■■□□□ 1.27
CDC42SE1-205ENST00000491825 NOS1P29475 1434 aa23■■□□□ 1.27
CDC42SE1-205ENST00000491825 RRBP1Q9P2E9 1410 aaKnown RBP23■■□□□ 1.27
CDC42SE1-205ENST00000491825 STRCP1A6NGW2 1772 aa23■■□□□ 1.27
CDC42SE1-205ENST00000491825 LRRC7Q96NW7 1537 aa22.99■■□□□ 1.27
CDC42SE1-205ENST00000491825 SYNMO15061 1565 aa22.99■■□□□ 1.27
CDC42SE1-205ENST00000491825 FAM50AQ14320 339 aaKnown RBP22.99■■□□□ 1.27
CDC42SE1-205ENST00000491825 TMEM2Q9UHN6 1383 aa22.99■■□□□ 1.27
CDC42SE1-205ENST00000491825 ANKRD50Q9ULJ7 1429 aa22.98■■□□□ 1.27
CDC42SE1-205ENST00000491825 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
CDC42SE1-205ENST00000491825 TOM1O60784 492 aa22.97■■□□□ 1.27
CDC42SE1-205ENST00000491825 TXNDC2Q86VQ3 553 aa22.97■■□□□ 1.27
CDC42SE1-205ENST00000491825 KDM5AP29375 1690 aaKnown RBP22.96■■□□□ 1.27
CDC42SE1-205ENST00000491825 IDI1Q13907 227 aa22.95■■□□□ 1.26
CDC42SE1-205ENST00000491825 HSPA1LP34931 641 aa22.94■■□□□ 1.26
CDC42SE1-205ENST00000491825 PIP4K2BP78356 416 aa22.94■■□□□ 1.26
CDC42SE1-205ENST00000491825 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
CDC42SE1-205ENST00000491825 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
CDC42SE1-205ENST00000491825 EID1Q9Y6B2 187 aa22.91■■□□□ 1.26
CDC42SE1-205ENST00000491825 ADGRB3O60242 1522 aa22.91■■□□□ 1.26
CDC42SE1-205ENST00000491825 STAG3Q9UJ98 1225 aa22.88■■□□□ 1.25
CDC42SE1-205ENST00000491825 UNC13BO14795 1591 aa22.88■■□□□ 1.25
CDC42SE1-205ENST00000491825 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
CDC42SE1-205ENST00000491825 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
CDC42SE1-205ENST00000491825 TET3O43151 1660 aa22.87■■□□□ 1.25
CDC42SE1-205ENST00000491825 SOCS7O14512 581 aa22.84■■□□□ 1.25
CDC42SE1-205ENST00000491825 ZFYVE9O95405 1425 aa22.82■■□□□ 1.24
CDC42SE1-205ENST00000491825 MED1Q15648 1581 aaPredicted RBP22.81■■□□□ 1.24
CDC42SE1-205ENST00000491825 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
CDC42SE1-205ENST00000491825 XIRP1Q702N8 1843 aaKnown RBP22.79■■□□□ 1.24
CDC42SE1-205ENST00000491825 NWD1Q149M9 1564 aa22.77■■□□□ 1.24
CDC42SE1-205ENST00000491825 SLC26A8Q96RN1 970 aa22.77■■□□□ 1.24
CDC42SE1-205ENST00000491825 IQGAP3Q86VI3 1631 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms