RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
GABRE-211ENST00000491339 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
GABRE-211ENST00000491339 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
GABRE-211ENST00000491339 RNF17Q9BXT8 1623 aaKnown RBP13.54□□□□□ -0.24
GABRE-211ENST00000491339 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.24
GABRE-211ENST00000491339 GGT6Q6P531 493 aa13.52□□□□□ -0.25
GABRE-211ENST00000491339 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
GABRE-211ENST00000491339 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
GABRE-211ENST00000491339 HSPA2P54652 639 aa13.51□□□□□ -0.25
GABRE-211ENST00000491339 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
GABRE-211ENST00000491339 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
GABRE-211ENST00000491339 STRCQ7RTU9 1775 aa13.49□□□□□ -0.25
GABRE-211ENST00000491339 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
GABRE-211ENST00000491339 KIF3BO15066 747 aa13.48□□□□□ -0.25
GABRE-211ENST00000491339 DAPK1P53355 1430 aa13.48□□□□□ -0.25
GABRE-211ENST00000491339 CEP152O94986 1710 aa13.47□□□□□ -0.25
GABRE-211ENST00000491339 PTPRKQ15262 1439 aa13.46□□□□□ -0.25
GABRE-211ENST00000491339 PZPP20742 1482 aa13.46□□□□□ -0.25
GABRE-211ENST00000491339 ERBINQ96RT1 1412 aa13.46□□□□□ -0.25
GABRE-211ENST00000491339 ABCC5O15440 1437 aa13.45□□□□□ -0.26
GABRE-211ENST00000491339 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
GABRE-211ENST00000491339 KIF15Q9NS87 1388 aa13.45□□□□□ -0.26
GABRE-211ENST00000491339 MROH1Q8NDA8 1641 aa13.45□□□□□ -0.26
GABRE-211ENST00000491339 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
GABRE-211ENST00000491339 ABCC3O15438 1527 aa13.44□□□□□ -0.26
GABRE-211ENST00000491339 DEPDC5O75140 1603 aa13.44□□□□□ -0.26
GABRE-211ENST00000491339 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
GABRE-211ENST00000491339 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
GABRE-211ENST00000491339 NCOA1Q15788 1441 aa13.43□□□□□ -0.26
GABRE-211ENST00000491339 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
GABRE-211ENST00000491339 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
GABRE-211ENST00000491339 A2ML1A8K2U0 1454 aa13.41□□□□□ -0.26
GABRE-211ENST00000491339 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
GABRE-211ENST00000491339 TNRQ92752 1358 aa13.4□□□□□ -0.26
GABRE-211ENST00000491339 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
GABRE-211ENST00000491339 PTPRTO14522 1441 aa13.4□□□□□ -0.26
GABRE-211ENST00000491339 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
GABRE-211ENST00000491339 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
GABRE-211ENST00000491339 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
GABRE-211ENST00000491339 KANK1Q14678 1352 aa13.37□□□□□ -0.27
GABRE-211ENST00000491339 ILDR1Q86SU0 546 aaPredicted RBP13.37□□□□□ -0.27
GABRE-211ENST00000491339 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
GABRE-211ENST00000491339 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
GABRE-211ENST00000491339 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
GABRE-211ENST00000491339 UGGT1Q9NYU2 1555 aa13.35□□□□□ -0.27
GABRE-211ENST00000491339 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
GABRE-211ENST00000491339 CHIC2Q9UKJ5 165 aa13.34□□□□□ -0.27
GABRE-211ENST00000491339 PKD2Q13563 968 aa13.33□□□□□ -0.28
GABRE-211ENST00000491339 LMTK2Q8IWU2 1503 aa13.33□□□□□ -0.28
GABRE-211ENST00000491339 FBXO31Q5XUX0 539 aaPredicted RBP13.32□□□□□ -0.28
GABRE-211ENST00000491339 ARHGAP31Q2M1Z3 1444 aa13.32□□□□□ -0.28
GABRE-211ENST00000491339 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
GABRE-211ENST00000491339 UBR1Q8IWV7 1749 aa13.32□□□□□ -0.28
GABRE-211ENST00000491339 EFCAB6Q5THR3 1501 aa13.32□□□□□ -0.28
GABRE-211ENST00000491339 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
GABRE-211ENST00000491339 UNC13BO14795 1591 aa13.31□□□□□ -0.28
GABRE-211ENST00000491339 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
GABRE-211ENST00000491339 TET3O43151 1660 aa13.3□□□□□ -0.28
GABRE-211ENST00000491339 NEURL4Q96JN8 1562 aa13.3□□□□□ -0.28
GABRE-211ENST00000491339 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
GABRE-211ENST00000491339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.281e-15■■■□□ 18.6
GABRE-211ENST00000491339 KDM5AP29375 1690 aaKnown RBP13.29□□□□□ -0.28
GABRE-211ENST00000491339 IQGAP1P46940 1657 aa13.29□□□□□ -0.28
GABRE-211ENST00000491339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.28
GABRE-211ENST00000491339 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
GABRE-211ENST00000491339 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
GABRE-211ENST00000491339 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
GABRE-211ENST00000491339 ROCK1Q13464 1354 aa13.28□□□□□ -0.28
GABRE-211ENST00000491339 PIK3C2BO00750 1634 aa13.27□□□□□ -0.28
GABRE-211ENST00000491339 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.29
GABRE-211ENST00000491339 RPRD2Q5VT52 1461 aaKnown RBP13.26□□□□□ -0.29
GABRE-211ENST00000491339 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
GABRE-211ENST00000491339 SYNMO15061 1565 aa13.24□□□□□ -0.29
GABRE-211ENST00000491339 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
GABRE-211ENST00000491339 PPARGC1BQ86YN6 1023 aaKnown RBP13.24□□□□□ -0.29
GABRE-211ENST00000491339 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
GABRE-211ENST00000491339 MED14O60244 1454 aa13.23□□□□□ -0.29
GABRE-211ENST00000491339 ADGRB3O60242 1522 aa13.23□□□□□ -0.29
GABRE-211ENST00000491339 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
GABRE-211ENST00000491339 SLIT1O75093 1534 aa13.22□□□□□ -0.29
GABRE-211ENST00000491339 CPS1P31327 1500 aa13.22□□□□□ -0.29
GABRE-211ENST00000491339 ITGAEP38570 1179 aa13.22□□□□□ -0.29
GABRE-211ENST00000491339 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.29
GABRE-211ENST00000491339 E9PCH4 1651 aa13.21□□□□□ -0.29
GABRE-211ENST00000491339 ZNF335Q9H4Z2 1342 aaPredicted RBP13.2□□□□□ -0.3
GABRE-211ENST00000491339 NOS1P29475 1434 aa13.2□□□□□ -0.3
GABRE-211ENST00000491339 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
GABRE-211ENST00000491339 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
GABRE-211ENST00000491339 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
GABRE-211ENST00000491339 ADRA2BP18089 450 aa13.18□□□□□ -0.3
GABRE-211ENST00000491339 SPHKAPQ2M3C7 1700 aa13.17□□□□□ -0.3
GABRE-211ENST00000491339 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
GABRE-211ENST00000491339 TMEM2Q9UHN6 1383 aa13.14□□□□□ -0.31
GABRE-211ENST00000491339 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
GABRE-211ENST00000491339 NUP155O75694 1391 aa13.14□□□□□ -0.31
GABRE-211ENST00000491339 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
GABRE-211ENST00000491339 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
GABRE-211ENST00000491339 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
GABRE-211ENST00000491339 IDI1Q13907 227 aa13.11□□□□□ -0.31
GABRE-211ENST00000491339 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms