RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
SCMH1-216ENST00000489421 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
SCMH1-216ENST00000489421 MAP3K4Q9Y6R4 1608 aa11.49□□□□□ -0.57
SCMH1-216ENST00000489421 UHRF1BP1LA0JNW5 1464 aa11.49□□□□□ -0.57
SCMH1-216ENST00000489421 G3V3G9 751 aa11.48□□□□□ -0.57
SCMH1-216ENST00000489421 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
SCMH1-216ENST00000489421 PTPRGP23470 1445 aa11.48□□□□□ -0.57
SCMH1-216ENST00000489421 CARMIL2Q6F5E8 1435 aa11.48□□□□□ -0.57
SCMH1-216ENST00000489421 GOLGA3Q08378 1498 aa11.48□□□□□ -0.57
SCMH1-216ENST00000489421 ABCA8O94911 1581 aa11.48□□□□□ -0.57
SCMH1-216ENST00000489421 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
SCMH1-216ENST00000489421 KIF21BO75037 1637 aa11.46□□□□□ -0.57
SCMH1-216ENST00000489421 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.57
SCMH1-216ENST00000489421 ST18O60284 1047 aa11.46□□□□□ -0.57
SCMH1-216ENST00000489421 NLRP6P59044 892 aa11.46□□□□□ -0.57
SCMH1-216ENST00000489421 GLI2P10070 1586 aa11.45□□□□□ -0.58
SCMH1-216ENST00000489421 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
SCMH1-216ENST00000489421 PLB1Q6P1J6 1458 aa11.44□□□□□ -0.58
SCMH1-216ENST00000489421 KDM6BO15054 1643 aa11.44□□□□□ -0.58
SCMH1-216ENST00000489421 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
SCMH1-216ENST00000489421 ASXL2Q76L83 1435 aa11.43□□□□□ -0.58
SCMH1-216ENST00000489421 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
SCMH1-216ENST00000489421 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
SCMH1-216ENST00000489421 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
SCMH1-216ENST00000489421 CFAP43Q8NDM7 1665 aa11.41□□□□□ -0.58
SCMH1-216ENST00000489421 HS6ST3Q8IZP7 471 aa11.41□□□□□ -0.58
SCMH1-216ENST00000489421 RAPGEF6Q8TEU7 1601 aa11.4□□□□□ -0.58
SCMH1-216ENST00000489421 SNPHO15079 494 aa11.4□□□□□ -0.58
SCMH1-216ENST00000489421 EPRSP07814 1512 aaKnown RBP11.39□□□□□ -0.59
SCMH1-216ENST00000489421 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
SCMH1-216ENST00000489421 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
SCMH1-216ENST00000489421 CHGAP10645 457 aaKnown RBP11.36□□□□□ -0.59
SCMH1-216ENST00000489421 WDR7Q9Y4E6 1490 aa11.35□□□□□ -0.59
SCMH1-216ENST00000489421 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
SCMH1-216ENST00000489421 COL17A1Q9UMD9 1497 aaPredicted RBP11.33□□□□□ -0.6
SCMH1-216ENST00000489421 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
SCMH1-216ENST00000489421 PPP1R37O75864 691 aa11.32□□□□□ -0.6
SCMH1-216ENST00000489421 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
SCMH1-216ENST00000489421 CLIP1P30622 1438 aa11.31□□□□□ -0.6
SCMH1-216ENST00000489421 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
SCMH1-216ENST00000489421 FHOD3Q2V2M9 1422 aa11.3□□□□□ -0.6
SCMH1-216ENST00000489421 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
SCMH1-216ENST00000489421 ATP10BO94823 1461 aa11.3□□□□□ -0.6
SCMH1-216ENST00000489421 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
SCMH1-216ENST00000489421 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
SCMH1-216ENST00000489421 TTC37Q6PGP7 1564 aa11.26□□□□□ -0.61
SCMH1-216ENST00000489421 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
SCMH1-216ENST00000489421 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
SCMH1-216ENST00000489421 FRMPD1Q5SYB0 1578 aa11.25□□□□□ -0.61
SCMH1-216ENST00000489421 RICTORQ6R327 1708 aa11.25□□□□□ -0.61
SCMH1-216ENST00000489421 ARHGAP35Q9NRY4 1499 aa11.25□□□□□ -0.61
SCMH1-216ENST00000489421 KIF3CO14782 793 aa11.24□□□□□ -0.61
SCMH1-216ENST00000489421 TEX14Q8IWB6 1497 aa11.24□□□□□ -0.61
SCMH1-216ENST00000489421 CDK13Q14004 1512 aaKnown RBP11.24□□□□□ -0.61
SCMH1-216ENST00000489421 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
SCMH1-216ENST00000489421 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
SCMH1-216ENST00000489421 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
SCMH1-216ENST00000489421 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
SCMH1-216ENST00000489421 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
SCMH1-216ENST00000489421 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
SCMH1-216ENST00000489421 EMP3P54852 163 aa11.22□□□□□ -0.61
SCMH1-216ENST00000489421 MYO5CQ9NQX4 1742 aa11.21□□□□□ -0.61
SCMH1-216ENST00000489421 KIF14Q15058 1648 aa11.21□□□□□ -0.61
SCMH1-216ENST00000489421 HECW1Q76N89 1606 aa11.21□□□□□ -0.61
SCMH1-216ENST00000489421 PCF11O94913 1555 aaKnown RBP11.21□□□□□ -0.61
SCMH1-216ENST00000489421 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
SCMH1-216ENST00000489421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCMH1-216ENST00000489421 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
SCMH1-216ENST00000489421 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
SCMH1-216ENST00000489421 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
SCMH1-216ENST00000489421 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
SCMH1-216ENST00000489421 VPS8Q8N3P4 1428 aa11.19□□□□□ -0.62
SCMH1-216ENST00000489421 CDC42BPBQ9Y5S2 1711 aa11.19□□□□□ -0.62
SCMH1-216ENST00000489421 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
SCMH1-216ENST00000489421 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
SCMH1-216ENST00000489421 ARAP3Q8WWN8 1544 aa11.17□□□□□ -0.62
SCMH1-216ENST00000489421 CDC42BPAQ5VT25 1732 aa11.17□□□□□ -0.62
SCMH1-216ENST00000489421 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
SCMH1-216ENST00000489421 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
SCMH1-216ENST00000489421 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
SCMH1-216ENST00000489421 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
SCMH1-216ENST00000489421 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
SCMH1-216ENST00000489421 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
SCMH1-216ENST00000489421 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
SCMH1-216ENST00000489421 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
SCMH1-216ENST00000489421 ZSWIM6Q9HCJ5 1215 aa11.13□□□□□ -0.63
SCMH1-216ENST00000489421 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
SCMH1-216ENST00000489421 BCORL1Q5H9F3 1711 aa11.12□□□□□ -0.63
SCMH1-216ENST00000489421 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
SCMH1-216ENST00000489421 NEO1Q92859 1461 aa11.12□□□□□ -0.63
SCMH1-216ENST00000489421 ARHGEF40Q8TER5 1519 aa11.11□□□□□ -0.63
SCMH1-216ENST00000489421 PREX2Q70Z35 1606 aa11.11□□□□□ -0.63
SCMH1-216ENST00000489421 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
SCMH1-216ENST00000489421 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
SCMH1-216ENST00000489421 FMN1Q68DA7 1419 aa11.09□□□□□ -0.63
SCMH1-216ENST00000489421 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
SCMH1-216ENST00000489421 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
SCMH1-216ENST00000489421 AMER1Q5JTC6 1135 aaPredicted RBP11.09□□□□□ -0.63
SCMH1-216ENST00000489421 KHSRPQ92945 711 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCMH1-216ENST00000489421 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms