RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PTPRKQ15262 1439 aa24.56■■□□□ 1.52
CTDSP1-209ENST00000488627 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
CTDSP1-209ENST00000488627 ANKRD30AQ9BXX3 1397 aa24.55■■□□□ 1.52
CTDSP1-209ENST00000488627 UHRF1BP1Q6BDS2 1440 aa24.54■■□□□ 1.52
CTDSP1-209ENST00000488627 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
CTDSP1-209ENST00000488627 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
CTDSP1-209ENST00000488627 SETD1BQ9UPS6 1966 aaKnown RBP24.53■■□□□ 1.52
CTDSP1-209ENST00000488627 ERBINQ96RT1 1412 aa24.52■■□□□ 1.52
CTDSP1-209ENST00000488627 ADGRL2O95490 1459 aa24.51■■□□□ 1.51
CTDSP1-209ENST00000488627 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
CTDSP1-209ENST00000488627 FBXO31Q5XUX0 539 aaPredicted RBP24.51■■□□□ 1.51
CTDSP1-209ENST00000488627 KDM5DQ9BY66 1539 aa24.51■■□□□ 1.51
CTDSP1-209ENST00000488627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.517e-9■■■■■ 61
CTDSP1-209ENST00000488627 RNF17Q9BXT8 1623 aaKnown RBP24.49■■□□□ 1.51
CTDSP1-209ENST00000488627 EIF2AK4Q9P2K8 1649 aaKnown RBP24.49■■□□□ 1.51
CTDSP1-209ENST00000488627 PREX1Q8TCU6 1659 aa24.49■■□□□ 1.51
CTDSP1-209ENST00000488627 MROH1Q8NDA8 1641 aa24.47■■□□□ 1.51
CTDSP1-209ENST00000488627 PZPP20742 1482 aa24.45■■□□□ 1.51
CTDSP1-209ENST00000488627 ABCC3O15438 1527 aa24.45■■□□□ 1.5
CTDSP1-209ENST00000488627 RRBP1Q9P2E9 1410 aaKnown RBP24.43■■□□□ 1.5
CTDSP1-209ENST00000488627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.54e-17■□□□□ 10.2
CTDSP1-209ENST00000488627 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
CTDSP1-209ENST00000488627 TNRQ92752 1358 aa24.41■■□□□ 1.5
CTDSP1-209ENST00000488627 ANKRD50Q9ULJ7 1429 aa24.4■■□□□ 1.5
CTDSP1-209ENST00000488627 ITGAEP38570 1179 aa24.39■■□□□ 1.49
CTDSP1-209ENST00000488627 PRDM15P57071 1507 aaPredicted RBP24.39■■□□□ 1.49
CTDSP1-209ENST00000488627 ARHGAP31Q2M1Z3 1444 aa24.35■■□□□ 1.49
CTDSP1-209ENST00000488627 KANK1Q14678 1352 aa24.34■■□□□ 1.49
CTDSP1-209ENST00000488627 DEPDC5O75140 1603 aa24.34■■□□□ 1.49
CTDSP1-209ENST00000488627 VWDEQ8N2E2 1590 aa24.33■■□□□ 1.48
CTDSP1-209ENST00000488627 A2ML1A8K2U0 1454 aa24.32■■□□□ 1.48
CTDSP1-209ENST00000488627 ZC3H13Q5T200 1668 aaKnown RBP24.32■■□□□ 1.48
CTDSP1-209ENST00000488627 DMRT2Q9Y5R5 561 aa24.32■■□□□ 1.48
CTDSP1-209ENST00000488627 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
CTDSP1-209ENST00000488627 CEP170BQ9Y4F5 1589 aaPredicted RBP24.31■■□□□ 1.48
CTDSP1-209ENST00000488627 ERVK-7P63135 1459 aa24.31■■□□□ 1.48
CTDSP1-209ENST00000488627 STRCQ7RTU9 1775 aa24.3■■□□□ 1.48
CTDSP1-209ENST00000488627 LMTK2Q8IWU2 1503 aa24.3■■□□□ 1.48
CTDSP1-209ENST00000488627 SPATA31D1Q6ZQQ2 1576 aa24.29■■□□□ 1.48
CTDSP1-209ENST00000488627 CAMSAP1Q5T5Y3 1602 aa24.28■■□□□ 1.48
CTDSP1-209ENST00000488627 NLRP1Q9C000 1473 aa24.28■■□□□ 1.48
CTDSP1-209ENST00000488627 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
CTDSP1-209ENST00000488627 ZNF142P52746 1687 aaPredicted RBP24.27■■□□□ 1.48
CTDSP1-209ENST00000488627 CEP152O94986 1710 aa24.27■■□□□ 1.48
CTDSP1-209ENST00000488627 PTPRTO14522 1441 aa24.27■■□□□ 1.48
CTDSP1-209ENST00000488627 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
CTDSP1-209ENST00000488627 PKD2Q13563 968 aa24.25■■□□□ 1.47
CTDSP1-209ENST00000488627 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
CTDSP1-209ENST00000488627 UGGT1Q9NYU2 1555 aa24.18■■□□□ 1.46
CTDSP1-209ENST00000488627 NOS1P29475 1434 aa24.18■■□□□ 1.46
CTDSP1-209ENST00000488627 NAIPQ13075 1403 aa24.17■■□□□ 1.46
CTDSP1-209ENST00000488627 NUP155O75694 1391 aa24.16■■□□□ 1.46
CTDSP1-209ENST00000488627 EFCAB6Q5THR3 1501 aa24.16■■□□□ 1.46
CTDSP1-209ENST00000488627 IDI1Q13907 227 aa24.16■■□□□ 1.46
CTDSP1-209ENST00000488627 UNC13BO14795 1591 aa24.16■■□□□ 1.46
CTDSP1-209ENST00000488627 ANKLE2Q86XL3 938 aa24.15■■□□□ 1.46
CTDSP1-209ENST00000488627 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
CTDSP1-209ENST00000488627 RPRD2Q5VT52 1461 aaKnown RBP24.13■■□□□ 1.45
CTDSP1-209ENST00000488627 CERKQ8TCT0 537 aa24.12■■□□□ 1.45
CTDSP1-209ENST00000488627 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
CTDSP1-209ENST00000488627 CFAP65Q6ZU64 1925 aaKnown RBP24.11■■□□□ 1.45
CTDSP1-209ENST00000488627 SLC52A1Q9NWF4 448 aa24.1■■□□□ 1.45
CTDSP1-209ENST00000488627 SYNMO15061 1565 aa24.08■■□□□ 1.45
CTDSP1-209ENST00000488627 TET3O43151 1660 aa24.08■■□□□ 1.44
CTDSP1-209ENST00000488627 LTKP29376 864 aa24.06■■□□□ 1.44
CTDSP1-209ENST00000488627 NEURL4Q96JN8 1562 aa24.06■■□□□ 1.44
CTDSP1-209ENST00000488627 MED14O60244 1454 aa24.06■■□□□ 1.44
CTDSP1-209ENST00000488627 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
CTDSP1-209ENST00000488627 FBXO41Q8TF61 875 aa24.05■■□□□ 1.44
CTDSP1-209ENST00000488627 ARHGAP23Q9P227 1491 aa24.05■■□□□ 1.44
CTDSP1-209ENST00000488627 ZNF335Q9H4Z2 1342 aaPredicted RBP24.05■■□□□ 1.44
CTDSP1-209ENST00000488627 LTBP4Q8N2S1 1624 aa24.04■■□□□ 1.44
CTDSP1-209ENST00000488627 TMEM2Q9UHN6 1383 aa24.03■■□□□ 1.44
CTDSP1-209ENST00000488627 TXNDC2Q86VQ3 553 aa24.03■■□□□ 1.44
CTDSP1-209ENST00000488627 STAG3Q9UJ98 1225 aa24.03■■□□□ 1.44
CTDSP1-209ENST00000488627 UBR1Q8IWV7 1749 aa24.03■■□□□ 1.44
CTDSP1-209ENST00000488627 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
CTDSP1-209ENST00000488627 SLIT1O75093 1534 aa24.02■■□□□ 1.44
CTDSP1-209ENST00000488627 PIK3C2BO00750 1634 aa24.01■■□□□ 1.43
CTDSP1-209ENST00000488627 E9PCH4 1651 aa23.99■■□□□ 1.43
CTDSP1-209ENST00000488627 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
CTDSP1-209ENST00000488627 SCAF11Q99590 1463 aaKnown RBP23.98■■□□□ 1.43
CTDSP1-209ENST00000488627 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
CTDSP1-209ENST00000488627 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
CTDSP1-209ENST00000488627 POLR1AO95602 1720 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-209ENST00000488627 ADGRB3O60242 1522 aa23.94■■□□□ 1.42
CTDSP1-209ENST00000488627 KDM5AP29375 1690 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-209ENST00000488627 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
CTDSP1-209ENST00000488627 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
CTDSP1-209ENST00000488627 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
CTDSP1-209ENST00000488627 TMEM131LA2VDJ0 1609 aa23.88■■□□□ 1.41
CTDSP1-209ENST00000488627 IQGAP1P46940 1657 aa23.87■■□□□ 1.41
CTDSP1-209ENST00000488627 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
CTDSP1-209ENST00000488627 IQSEC2Q5JU85 1478 aa23.86■■□□□ 1.41
CTDSP1-209ENST00000488627 RIMS2Q9UQ26 1411 aa23.85■■□□□ 1.41
CTDSP1-209ENST00000488627 HDGFP51858 240 aaKnown RBP23.84■■□□□ 1.41
CTDSP1-209ENST00000488627 SLC26A8Q96RN1 970 aa23.82■■□□□ 1.4
CTDSP1-209ENST00000488627 MPHOSPH9Q99550 1183 aa23.82■■□□□ 1.4
CTDSP1-209ENST00000488627 CPS1P31327 1500 aa23.81■■□□□ 1.4
CTDSP1-209ENST00000488627 FOXD1Q16676 465 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms