RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
CTDSP1-209ENST00000488627 Q1T7F1 81 aa5.64□□□□□ -1.51
CTDSP1-209ENST00000488627 MT1MQ8N339 61 aa5.64□□□□□ -1.51
CTDSP1-209ENST00000488627 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
CTDSP1-209ENST00000488627 PSPHP1O15172 72 aa5.62□□□□□ -1.51
CTDSP1-209ENST00000488627 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
CTDSP1-209ENST00000488627 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
CTDSP1-209ENST00000488627 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
CTDSP1-209ENST00000488627 K7ERS5 55 aa5.49□□□□□ -1.53
CTDSP1-209ENST00000488627 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CTDSP1-209ENST00000488627 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
CTDSP1-209ENST00000488627 GPR98Q8WXG9 6306 aa5.42□□□□□ -1.54
CTDSP1-209ENST00000488627 A6NED7 52 aa5.42□□□□□ -1.54
CTDSP1-209ENST00000488627 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
CTDSP1-209ENST00000488627 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
CTDSP1-209ENST00000488627 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
CTDSP1-209ENST00000488627 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
CTDSP1-209ENST00000488627 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
CTDSP1-209ENST00000488627 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
CTDSP1-209ENST00000488627 MT4P47944 62 aa5.3□□□□□ -1.56
CTDSP1-209ENST00000488627 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
CTDSP1-209ENST00000488627 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
CTDSP1-209ENST00000488627 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
CTDSP1-209ENST00000488627 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
CTDSP1-209ENST00000488627 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
CTDSP1-209ENST00000488627 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
CTDSP1-209ENST00000488627 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
CTDSP1-209ENST00000488627 ROMO1P60602 79 aa5.19□□□□□ -1.58
CTDSP1-209ENST00000488627 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
CTDSP1-209ENST00000488627 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
CTDSP1-209ENST00000488627 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
CTDSP1-209ENST00000488627 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
CTDSP1-209ENST00000488627 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
CTDSP1-209ENST00000488627 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
CTDSP1-209ENST00000488627 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
CTDSP1-209ENST00000488627 KRTAP5-10Q6L8G5 202 aa4.98□□□□□ -1.61
CTDSP1-209ENST00000488627 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
CTDSP1-209ENST00000488627 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
CTDSP1-209ENST00000488627 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
CTDSP1-209ENST00000488627 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
CTDSP1-209ENST00000488627 MT1AP04731 61 aa4.84□□□□□ -1.63
CTDSP1-209ENST00000488627 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
CTDSP1-209ENST00000488627 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
CTDSP1-209ENST00000488627 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
CTDSP1-209ENST00000488627 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
CTDSP1-209ENST00000488627 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
CTDSP1-209ENST00000488627 H3BS24 57 aa4.62□□□□□ -1.67
CTDSP1-209ENST00000488627 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
CTDSP1-209ENST00000488627 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CTDSP1-209ENST00000488627 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
CTDSP1-209ENST00000488627 MT3P25713 68 aa4.41□□□□□ -1.7
CTDSP1-209ENST00000488627 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
CTDSP1-209ENST00000488627 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
CTDSP1-209ENST00000488627 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
CTDSP1-209ENST00000488627 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
CTDSP1-209ENST00000488627 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
CTDSP1-209ENST00000488627 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
CTDSP1-209ENST00000488627 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CTDSP1-209ENST00000488627 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
CTDSP1-209ENST00000488627 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
CTDSP1-209ENST00000488627 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
CTDSP1-209ENST00000488627 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
CTDSP1-209ENST00000488627 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
CTDSP1-209ENST00000488627 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
CTDSP1-209ENST00000488627 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CTDSP1-209ENST00000488627 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
CTDSP1-209ENST00000488627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CTDSP1-209ENST00000488627 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
CTDSP1-209ENST00000488627 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CTDSP1-209ENST00000488627 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CTDSP1-209ENST00000488627 INE1O15225 51 aa3.23□□□□□ -1.89
CTDSP1-209ENST00000488627 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
CTDSP1-209ENST00000488627 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
CTDSP1-209ENST00000488627 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CTDSP1-209ENST00000488627 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CTDSP1-209ENST00000488627 PRM1P04553 51 aa2.66□□□□□ -1.98
CTDSP1-209ENST00000488627 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CTDSP1-209ENST00000488627 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms