RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 SHANK2Q9UPX8 1470 aa20.75■□□□□ 0.91
MECP2-210ENST00000488293 DNMT1P26358 1616 aaKnown RBP20.75■□□□□ 0.91
MECP2-210ENST00000488293 RNF17Q9BXT8 1623 aaKnown RBP20.75■□□□□ 0.91
MECP2-210ENST00000488293 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
MECP2-210ENST00000488293 MYO3AQ8NEV4 1616 aa20.74■□□□□ 0.91
MECP2-210ENST00000488293 ZNF142P52746 1687 aaPredicted RBP20.73■□□□□ 0.91
MECP2-210ENST00000488293 ABCC5O15440 1437 aa20.73■□□□□ 0.91
MECP2-210ENST00000488293 DUOX2Q9NRD8 1548 aa20.72■□□□□ 0.91
MECP2-210ENST00000488293 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
MECP2-210ENST00000488293 ZC3H13Q5T200 1668 aaKnown RBP20.7■□□□□ 0.91
MECP2-210ENST00000488293 DAPK1P53355 1430 aa20.7■□□□□ 0.9
MECP2-210ENST00000488293 PZPP20742 1482 aa20.69■□□□□ 0.9
MECP2-210ENST00000488293 CEP170BQ9Y4F5 1589 aaPredicted RBP20.68■□□□□ 0.9
MECP2-210ENST00000488293 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
MECP2-210ENST00000488293 NCOA1Q15788 1441 aa20.68■□□□□ 0.9
MECP2-210ENST00000488293 PTPRTO14522 1441 aa20.66■□□□□ 0.9
MECP2-210ENST00000488293 MROH1Q8NDA8 1641 aa20.65■□□□□ 0.9
MECP2-210ENST00000488293 KIF15Q9NS87 1388 aa20.65■□□□□ 0.9
MECP2-210ENST00000488293 FBXO41Q8TF61 875 aa20.65■□□□□ 0.9
MECP2-210ENST00000488293 ABCC3O15438 1527 aa20.64■□□□□ 0.9
MECP2-210ENST00000488293 ERBINQ96RT1 1412 aa20.64■□□□□ 0.89
MECP2-210ENST00000488293 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
MECP2-210ENST00000488293 CEP152O94986 1710 aa20.63■□□□□ 0.89
MECP2-210ENST00000488293 A2ML1A8K2U0 1454 aa20.62■□□□□ 0.89
MECP2-210ENST00000488293 TNRQ92752 1358 aa20.62■□□□□ 0.89
MECP2-210ENST00000488293 FBXO31Q5XUX0 539 aaPredicted RBP20.62■□□□□ 0.89
MECP2-210ENST00000488293 PLA2R1Q13018 1463 aa20.62■□□□□ 0.89
MECP2-210ENST00000488293 ANKRD30AQ9BXX3 1397 aa20.61■□□□□ 0.89
MECP2-210ENST00000488293 CFAP65Q6ZU64 1925 aaKnown RBP20.6■□□□□ 0.89
MECP2-210ENST00000488293 DEPDC5O75140 1603 aa20.6■□□□□ 0.89
MECP2-210ENST00000488293 PRDM15P57071 1507 aaPredicted RBP20.59■□□□□ 0.89
MECP2-210ENST00000488293 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
MECP2-210ENST00000488293 CERKQ8TCT0 537 aa20.59■□□□□ 0.89
MECP2-210ENST00000488293 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
MECP2-210ENST00000488293 ADGRL2O95490 1459 aa20.57■□□□□ 0.88
MECP2-210ENST00000488293 PKD2Q13563 968 aa20.57■□□□□ 0.88
MECP2-210ENST00000488293 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
MECP2-210ENST00000488293 SPATA31D1Q6ZQQ2 1576 aa20.56■□□□□ 0.88
MECP2-210ENST00000488293 NCKAP5LQ9HCH0 1330 aa20.55■□□□□ 0.88
MECP2-210ENST00000488293 POLR1AO95602 1720 aaPredicted RBP20.54■□□□□ 0.88
MECP2-210ENST00000488293 ERVK-7P63135 1459 aa20.52■□□□□ 0.88
MECP2-210ENST00000488293 KANK1Q14678 1352 aa20.52■□□□□ 0.88
MECP2-210ENST00000488293 ARHGAP31Q2M1Z3 1444 aa20.52■□□□□ 0.87
MECP2-210ENST00000488293 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
MECP2-210ENST00000488293 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
MECP2-210ENST00000488293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
MECP2-210ENST00000488293 LTBP4Q8N2S1 1624 aa20.49■□□□□ 0.87
MECP2-210ENST00000488293 VWDEQ8N2E2 1590 aa20.49■□□□□ 0.87
MECP2-210ENST00000488293 LMTK2Q8IWU2 1503 aa20.48■□□□□ 0.87
MECP2-210ENST00000488293 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
MECP2-210ENST00000488293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.87
MECP2-210ENST00000488293 UBR1Q8IWV7 1749 aa20.45■□□□□ 0.86
MECP2-210ENST00000488293 NEURL4Q96JN8 1562 aa20.45■□□□□ 0.86
MECP2-210ENST00000488293 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
MECP2-210ENST00000488293 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
MECP2-210ENST00000488293 ROCK1Q13464 1354 aa20.43■□□□□ 0.86
MECP2-210ENST00000488293 IQSEC2Q5JU85 1478 aa20.43■□□□□ 0.86
MECP2-210ENST00000488293 EFCAB6Q5THR3 1501 aa20.41■□□□□ 0.86
MECP2-210ENST00000488293 MED14O60244 1454 aa20.4■□□□□ 0.86
MECP2-210ENST00000488293 ZNF335Q9H4Z2 1342 aaPredicted RBP20.4■□□□□ 0.86
MECP2-210ENST00000488293 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
MECP2-210ENST00000488293 UNC13BO14795 1591 aa20.38■□□□□ 0.85
MECP2-210ENST00000488293 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
MECP2-210ENST00000488293 PIK3C2BO00750 1634 aa20.38■□□□□ 0.85
MECP2-210ENST00000488293 TET3O43151 1660 aa20.37■□□□□ 0.85
MECP2-210ENST00000488293 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
MECP2-210ENST00000488293 GCC2Q8IWJ2 1684 aa20.36■□□□□ 0.85
MECP2-210ENST00000488293 RPRD2Q5VT52 1461 aaKnown RBP20.35■□□□□ 0.85
MECP2-210ENST00000488293 SYNMO15061 1565 aa20.34■□□□□ 0.85
MECP2-210ENST00000488293 SLIT1O75093 1534 aa20.34■□□□□ 0.85
MECP2-210ENST00000488293 ITGAEP38570 1179 aa20.34■□□□□ 0.85
MECP2-210ENST00000488293 NOS1P29475 1434 aa20.34■□□□□ 0.85
MECP2-210ENST00000488293 RRBP1Q9P2E9 1410 aaKnown RBP20.34■□□□□ 0.85
MECP2-210ENST00000488293 ARHGAP23Q9P227 1491 aa20.33■□□□□ 0.85
MECP2-210ENST00000488293 CPS1P31327 1500 aa20.31■□□□□ 0.84
MECP2-210ENST00000488293 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
MECP2-210ENST00000488293 SCAF11Q99590 1463 aaKnown RBP20.3■□□□□ 0.84
MECP2-210ENST00000488293 IDI1Q13907 227 aa20.3■□□□□ 0.84
MECP2-210ENST00000488293 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
MECP2-210ENST00000488293 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
MECP2-210ENST00000488293 TXNDC2Q86VQ3 553 aa20.28■□□□□ 0.84
MECP2-210ENST00000488293 E9PCH4 1651 aa20.28■□□□□ 0.84
MECP2-210ENST00000488293 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
MECP2-210ENST00000488293 EID1Q9Y6B2 187 aa20.27■□□□□ 0.84
MECP2-210ENST00000488293 LTKP29376 864 aa20.26■□□□□ 0.83
MECP2-210ENST00000488293 ADGRB3O60242 1522 aa20.26■□□□□ 0.83
MECP2-210ENST00000488293 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
MECP2-210ENST00000488293 NUP155O75694 1391 aa20.24■□□□□ 0.83
MECP2-210ENST00000488293 STRCP1A6NGW2 1772 aa20.24■□□□□ 0.83
MECP2-210ENST00000488293 UBAP1LF5GYI3 381 aa20.21■□□□□ 0.83
MECP2-210ENST00000488293 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
MECP2-210ENST00000488293 NAIPQ13075 1403 aa20.17■□□□□ 0.82
MECP2-210ENST00000488293 SPHKAPQ2M3C7 1700 aa20.15■□□□□ 0.82
MECP2-210ENST00000488293 LRRC7Q96NW7 1537 aa20.14■□□□□ 0.81
MECP2-210ENST00000488293 TOM1O60784 492 aa20.14■□□□□ 0.81
MECP2-210ENST00000488293 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
MECP2-210ENST00000488293 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
MECP2-210ENST00000488293 HFM1A2PYH4 1435 aa20.12■□□□□ 0.81
MECP2-210ENST00000488293 XIRP1Q702N8 1843 aaKnown RBP20.11■□□□□ 0.81
MECP2-210ENST00000488293 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms