RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
MECP2-210ENST00000488293 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
MECP2-210ENST00000488293 ABCC9O60706 1549 aa29.03■■■□□ 2.24
MECP2-210ENST00000488293 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
MECP2-210ENST00000488293 NACADO15069 1562 aa27.74■■■□□ 2.03
MECP2-210ENST00000488293 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
MECP2-210ENST00000488293 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
MECP2-210ENST00000488293 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
MECP2-210ENST00000488293 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
MECP2-210ENST00000488293 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
MECP2-210ENST00000488293 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
MECP2-210ENST00000488293 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
MECP2-210ENST00000488293 DNAJC5BQ9UF47 199 aa26.91■■□□□ 1.9
MECP2-210ENST00000488293 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
MECP2-210ENST00000488293 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
MECP2-210ENST00000488293 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
MECP2-210ENST00000488293 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
MECP2-210ENST00000488293 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
MECP2-210ENST00000488293 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
MECP2-210ENST00000488293 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
MECP2-210ENST00000488293 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
MECP2-210ENST00000488293 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
MECP2-210ENST00000488293 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
MECP2-210ENST00000488293 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
MECP2-210ENST00000488293 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
MECP2-210ENST00000488293 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
MECP2-210ENST00000488293 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
MECP2-210ENST00000488293 WIZO95785 1651 aa25.08■■□□□ 1.61
MECP2-210ENST00000488293 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
MECP2-210ENST00000488293 NESP48681 1621 aa25.02■■□□□ 1.6
MECP2-210ENST00000488293 LAMC3Q9Y6N6 1575 aa24.98■■□□□ 1.59
MECP2-210ENST00000488293 CUX2O14529 1486 aa24.93■■□□□ 1.58
MECP2-210ENST00000488293 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
MECP2-210ENST00000488293 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
MECP2-210ENST00000488293 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
MECP2-210ENST00000488293 KIF21AQ7Z4S6 1674 aa24.79■■□□□ 1.56
MECP2-210ENST00000488293 TOP2AP11388 1531 aaKnown RBP24.78■■□□□ 1.56
MECP2-210ENST00000488293 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
MECP2-210ENST00000488293 CFTRP13569 1480 aa24.59■■□□□ 1.53
MECP2-210ENST00000488293 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
MECP2-210ENST00000488293 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
MECP2-210ENST00000488293 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
MECP2-210ENST00000488293 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
MECP2-210ENST00000488293 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
MECP2-210ENST00000488293 WDR62O43379 1518 aa24.49■■□□□ 1.51
MECP2-210ENST00000488293 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
MECP2-210ENST00000488293 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
MECP2-210ENST00000488293 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
MECP2-210ENST00000488293 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
MECP2-210ENST00000488293 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
MECP2-210ENST00000488293 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
MECP2-210ENST00000488293 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
MECP2-210ENST00000488293 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
MECP2-210ENST00000488293 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
MECP2-210ENST00000488293 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
MECP2-210ENST00000488293 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
MECP2-210ENST00000488293 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
MECP2-210ENST00000488293 CUX1P39880 1505 aa23.79■■□□□ 1.4
MECP2-210ENST00000488293 SOGA1O94964 1423 aa23.76■■□□□ 1.39
MECP2-210ENST00000488293 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
MECP2-210ENST00000488293 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
MECP2-210ENST00000488293 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
MECP2-210ENST00000488293 WDR97A6NE52 1622 aa23.7■■□□□ 1.39
MECP2-210ENST00000488293 CHD1O14646 1710 aa23.64■■□□□ 1.38
MECP2-210ENST00000488293 TDRD9Q8NDG6 1382 aaKnown RBP23.64■■□□□ 1.37
MECP2-210ENST00000488293 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
MECP2-210ENST00000488293 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
MECP2-210ENST00000488293 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
MECP2-210ENST00000488293 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
MECP2-210ENST00000488293 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
MECP2-210ENST00000488293 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
MECP2-210ENST00000488293 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
MECP2-210ENST00000488293 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
MECP2-210ENST00000488293 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
MECP2-210ENST00000488293 FBLN2P98095 1184 aa23.51■■□□□ 1.35
MECP2-210ENST00000488293 RIMBP3CA6NJZ7 1639 aa23.51■■□□□ 1.35
MECP2-210ENST00000488293 RIMBP3BA6NNM3 1639 aa23.51■■□□□ 1.35
MECP2-210ENST00000488293 RIMBP3Q9UFD9 1639 aa23.51■■□□□ 1.35
MECP2-210ENST00000488293 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
MECP2-210ENST00000488293 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
MECP2-210ENST00000488293 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
MECP2-210ENST00000488293 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
MECP2-210ENST00000488293 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
MECP2-210ENST00000488293 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
MECP2-210ENST00000488293 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
MECP2-210ENST00000488293 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
MECP2-210ENST00000488293 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
MECP2-210ENST00000488293 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
MECP2-210ENST00000488293 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
MECP2-210ENST00000488293 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
MECP2-210ENST00000488293 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
MECP2-210ENST00000488293 NUP160Q12769 1436 aa23.13■■□□□ 1.29
MECP2-210ENST00000488293 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
MECP2-210ENST00000488293 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
MECP2-210ENST00000488293 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
MECP2-210ENST00000488293 CUL7Q14999 1698 aa23.01■■□□□ 1.27
MECP2-210ENST00000488293 IGF1RP08069 1367 aa23■■□□□ 1.27
MECP2-210ENST00000488293 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
MECP2-210ENST00000488293 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
MECP2-210ENST00000488293 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms