RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 NPATQ14207 1427 aa24.67■■□□□ 1.54
GABPA-203ENST00000487266 PTPRKQ15262 1439 aa24.67■■□□□ 1.54
GABPA-203ENST00000487266 MROH1Q8NDA8 1641 aa24.65■■□□□ 1.54
GABPA-203ENST00000487266 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
GABPA-203ENST00000487266 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.54
GABPA-203ENST00000487266 DUOX2Q9NRD8 1548 aa24.64■■□□□ 1.53
GABPA-203ENST00000487266 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
GABPA-203ENST00000487266 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
GABPA-203ENST00000487266 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
GABPA-203ENST00000487266 CEP152O94986 1710 aa24.61■■□□□ 1.53
GABPA-203ENST00000487266 ZNF142P52746 1687 aaPredicted RBP24.6■■□□□ 1.53
GABPA-203ENST00000487266 FAM50AQ14320 339 aaKnown RBP24.6■■□□□ 1.53
GABPA-203ENST00000487266 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
GABPA-203ENST00000487266 CHIC2Q9UKJ5 165 aa24.59■■□□□ 1.53
GABPA-203ENST00000487266 ABCC3O15438 1527 aa24.59■■□□□ 1.53
GABPA-203ENST00000487266 ZC3H13Q5T200 1668 aaKnown RBP24.58■■□□□ 1.53
GABPA-203ENST00000487266 CEP170BQ9Y4F5 1589 aaPredicted RBP24.58■■□□□ 1.52
GABPA-203ENST00000487266 WASHC2CQ9Y4E1 1318 aa24.58■■□□□ 1.52
GABPA-203ENST00000487266 PZPP20742 1482 aa24.58■■□□□ 1.52
GABPA-203ENST00000487266 ERBINQ96RT1 1412 aa24.55■■□□□ 1.52
GABPA-203ENST00000487266 CAMSAP1Q5T5Y3 1602 aa24.55■■□□□ 1.52
GABPA-203ENST00000487266 FBXO31Q5XUX0 539 aaPredicted RBP24.55■■□□□ 1.52
GABPA-203ENST00000487266 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
GABPA-203ENST00000487266 DEPDC5O75140 1603 aa24.52■■□□□ 1.52
GABPA-203ENST00000487266 ANKRD30AQ9BXX3 1397 aa24.52■■□□□ 1.52
GABPA-203ENST00000487266 NCOA1Q15788 1441 aa24.52■■□□□ 1.52
GABPA-203ENST00000487266 ADGRL2O95490 1459 aa24.51■■□□□ 1.51
GABPA-203ENST00000487266 TNRQ92752 1358 aa24.49■■□□□ 1.51
GABPA-203ENST00000487266 ILDR1Q86SU0 546 aaPredicted RBP24.48■■□□□ 1.51
GABPA-203ENST00000487266 CFAP65Q6ZU64 1925 aaKnown RBP24.47■■□□□ 1.51
GABPA-203ENST00000487266 A2ML1A8K2U0 1454 aa24.46■■□□□ 1.51
GABPA-203ENST00000487266 SPATA31D1Q6ZQQ2 1576 aa24.44■■□□□ 1.5
GABPA-203ENST00000487266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.5
GABPA-203ENST00000487266 ERVK-7P63135 1459 aa24.43■■□□□ 1.5
GABPA-203ENST00000487266 PLA2R1Q13018 1463 aa24.41■■□□□ 1.5
GABPA-203ENST00000487266 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
GABPA-203ENST00000487266 VWDEQ8N2E2 1590 aa24.39■■□□□ 1.5
GABPA-203ENST00000487266 PTPRTO14522 1441 aa24.39■■□□□ 1.5
GABPA-203ENST00000487266 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
GABPA-203ENST00000487266 ITGAEP38570 1179 aa24.38■■□□□ 1.49
GABPA-203ENST00000487266 DMRT2Q9Y5R5 561 aa24.37■■□□□ 1.49
GABPA-203ENST00000487266 NLRP1Q9C000 1473 aa24.37■■□□□ 1.49
GABPA-203ENST00000487266 POLR1AO95602 1720 aaPredicted RBP24.36■■□□□ 1.49
GABPA-203ENST00000487266 UGGT1Q9NYU2 1555 aa24.35■■□□□ 1.49
GABPA-203ENST00000487266 LMTK2Q8IWU2 1503 aa24.34■■□□□ 1.49
GABPA-203ENST00000487266 ARHGAP31Q2M1Z3 1444 aa24.34■■□□□ 1.49
GABPA-203ENST00000487266 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
GABPA-203ENST00000487266 KANK1Q14678 1352 aa24.33■■□□□ 1.49
GABPA-203ENST00000487266 EFCAB6Q5THR3 1501 aa24.32■■□□□ 1.48
GABPA-203ENST00000487266 ROCK1Q13464 1354 aa24.31■■□□□ 1.48
GABPA-203ENST00000487266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.31■■□□□ 1.48
GABPA-203ENST00000487266 UNC13BO14795 1591 aa24.31■■□□□ 1.48
GABPA-203ENST00000487266 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
GABPA-203ENST00000487266 UBR1Q8IWV7 1749 aa24.3■■□□□ 1.48
GABPA-203ENST00000487266 LTBP4Q8N2S1 1624 aa24.29■■□□□ 1.48
GABPA-203ENST00000487266 CERKQ8TCT0 537 aa24.29■■□□□ 1.48
GABPA-203ENST00000487266 PKD2Q13563 968 aa24.28■■□□□ 1.48
GABPA-203ENST00000487266 FBXO41Q8TF61 875 aa24.27■■□□□ 1.48
GABPA-203ENST00000487266 SYNMO15061 1565 aa24.26■■□□□ 1.47
GABPA-203ENST00000487266 PIK3C2BO00750 1634 aa24.26■■□□□ 1.47
GABPA-203ENST00000487266 TET3O43151 1660 aa24.25■■□□□ 1.47
GABPA-203ENST00000487266 ZNF335Q9H4Z2 1342 aaPredicted RBP24.23■■□□□ 1.47
GABPA-203ENST00000487266 GCC2Q8IWJ2 1684 aa24.23■■□□□ 1.47
GABPA-203ENST00000487266 THEMISQ8N1K5 641 aaPredicted RBP24.21■■□□□ 1.47
GABPA-203ENST00000487266 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
GABPA-203ENST00000487266 NOS1P29475 1434 aa24.19■■□□□ 1.46
GABPA-203ENST00000487266 E9PCH4 1651 aa24.19■■□□□ 1.46
GABPA-203ENST00000487266 IQGAP1P46940 1657 aa24.19■■□□□ 1.46
GABPA-203ENST00000487266 ANKLE2Q86XL3 938 aa24.17■■□□□ 1.46
GABPA-203ENST00000487266 NPHP4O75161 1426 aaPredicted RBP24.16■■□□□ 1.46
GABPA-203ENST00000487266 MED14O60244 1454 aa24.15■■□□□ 1.46
GABPA-203ENST00000487266 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
GABPA-203ENST00000487266 ARHGAP23Q9P227 1491 aa24.14■■□□□ 1.46
GABPA-203ENST00000487266 SLIT1O75093 1534 aa24.14■■□□□ 1.45
GABPA-203ENST00000487266 ADGRB3O60242 1522 aa24.13■■□□□ 1.45
GABPA-203ENST00000487266 MYO5BQ9ULV0 1848 aa24.12■■□□□ 1.45
GABPA-203ENST00000487266 KDM5AP29375 1690 aaKnown RBP24.12■■□□□ 1.45
GABPA-203ENST00000487266 IDI1Q13907 227 aa24.12■■□□□ 1.45
GABPA-203ENST00000487266 NUP155O75694 1391 aa24.12■■□□□ 1.45
GABPA-203ENST00000487266 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
GABPA-203ENST00000487266 NAIPQ13075 1403 aa24.1■■□□□ 1.45
GABPA-203ENST00000487266 LTKP29376 864 aa24.08■■□□□ 1.45
GABPA-203ENST00000487266 STRCP1A6NGW2 1772 aa24.07■■□□□ 1.44
GABPA-203ENST00000487266 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
GABPA-203ENST00000487266 TMEM2Q9UHN6 1383 aa24.06■■□□□ 1.44
GABPA-203ENST00000487266 IQSEC2Q5JU85 1478 aa24.05■■□□□ 1.44
GABPA-203ENST00000487266 TXNDC2Q86VQ3 553 aa24.04■■□□□ 1.44
GABPA-203ENST00000487266 HFM1A2PYH4 1435 aa24.03■■□□□ 1.44
GABPA-203ENST00000487266 TMEM131LA2VDJ0 1609 aa24.02■■□□□ 1.44
GABPA-203ENST00000487266 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
GABPA-203ENST00000487266 CPS1P31327 1500 aa24.01■■□□□ 1.43
GABPA-203ENST00000487266 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
GABPA-203ENST00000487266 EID1Q9Y6B2 187 aa23.98■■□□□ 1.43
GABPA-203ENST00000487266 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
GABPA-203ENST00000487266 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
GABPA-203ENST00000487266 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
GABPA-203ENST00000487266 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
GABPA-203ENST00000487266 CLTCL1P53675 1640 aa23.91■■□□□ 1.42
GABPA-203ENST00000487266 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
GABPA-203ENST00000487266 UBAP1LF5GYI3 381 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms