RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 PTPRTO14522 1441 aa11.6□□□□□ -0.55
CPNE1-226ENST00000486021 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
CPNE1-226ENST00000486021 MYO3AQ8NEV4 1616 aa11.59□□□□□ -0.55
CPNE1-226ENST00000486021 PKD2Q13563 968 aa11.58□□□□□ -0.56
CPNE1-226ENST00000486021 DUOX2Q9NRD8 1548 aa11.57□□□□□ -0.56
CPNE1-226ENST00000486021 CEP170BQ9Y4F5 1589 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-226ENST00000486021 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
CPNE1-226ENST00000486021 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
CPNE1-226ENST00000486021 RNF17Q9BXT8 1623 aaKnown RBP11.56□□□□□ -0.56
CPNE1-226ENST00000486021 PLA2R1Q13018 1463 aa11.56□□□□□ -0.56
CPNE1-226ENST00000486021 SHANK2Q9UPX8 1470 aa11.56□□□□□ -0.56
CPNE1-226ENST00000486021 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-226ENST00000486021 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
CPNE1-226ENST00000486021 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-226ENST00000486021 DNMT1P26358 1616 aaKnown RBP11.55□□□□□ -0.56
CPNE1-226ENST00000486021 PZPP20742 1482 aa11.55□□□□□ -0.56
CPNE1-226ENST00000486021 KANK1Q14678 1352 aa11.54□□□□□ -0.56
CPNE1-226ENST00000486021 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
CPNE1-226ENST00000486021 NCOA1Q15788 1441 aa11.53□□□□□ -0.56
CPNE1-226ENST00000486021 A2ML1A8K2U0 1454 aa11.53□□□□□ -0.56
CPNE1-226ENST00000486021 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
CPNE1-226ENST00000486021 THEMISQ8N1K5 641 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-226ENST00000486021 ANKRD30AQ9BXX3 1397 aa11.53□□□□□ -0.56
CPNE1-226ENST00000486021 ERBINQ96RT1 1412 aa11.52□□□□□ -0.56
CPNE1-226ENST00000486021 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.56
CPNE1-226ENST00000486021 TNRQ92752 1358 aa11.52□□□□□ -0.57
CPNE1-226ENST00000486021 CEP152O94986 1710 aa11.52□□□□□ -0.57
CPNE1-226ENST00000486021 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.57
CPNE1-226ENST00000486021 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
CPNE1-226ENST00000486021 DAPK1P53355 1430 aa11.5□□□□□ -0.57
CPNE1-226ENST00000486021 UGGT1Q9NYU2 1555 aa11.5□□□□□ -0.57
CPNE1-226ENST00000486021 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
CPNE1-226ENST00000486021 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
CPNE1-226ENST00000486021 ABCC5O15440 1437 aa11.47□□□□□ -0.57
CPNE1-226ENST00000486021 RRP7BPQ9NSQ0 103 aa11.47□□□□□ -0.57
CPNE1-226ENST00000486021 DEPDC5O75140 1603 aa11.46□□□□□ -0.57
CPNE1-226ENST00000486021 SPATA31D1Q6ZQQ2 1576 aa11.46□□□□□ -0.57
CPNE1-226ENST00000486021 ABCC3O15438 1527 aa11.46□□□□□ -0.57
CPNE1-226ENST00000486021 PRDM15P57071 1507 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-226ENST00000486021 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.57
CPNE1-226ENST00000486021 NCKAP5LQ9HCH0 1330 aa11.45□□□□□ -0.58
CPNE1-226ENST00000486021 KDM5AP29375 1690 aaKnown RBP11.45□□□□□ -0.58
CPNE1-226ENST00000486021 ARHGAP31Q2M1Z3 1444 aa11.44□□□□□ -0.58
CPNE1-226ENST00000486021 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
CPNE1-226ENST00000486021 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
CPNE1-226ENST00000486021 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-226ENST00000486021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.581e-8■□□□□ 10.9
CPNE1-226ENST00000486021 EID1Q9Y6B2 187 aa11.43□□□□□ -0.58
CPNE1-226ENST00000486021 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
CPNE1-226ENST00000486021 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
CPNE1-226ENST00000486021 CPS1P31327 1500 aa11.42□□□□□ -0.58
CPNE1-226ENST00000486021 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
CPNE1-226ENST00000486021 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
CPNE1-226ENST00000486021 UBR1Q8IWV7 1749 aa11.42□□□□□ -0.58
CPNE1-226ENST00000486021 ERVK-7P63135 1459 aa11.42□□□□□ -0.58
CPNE1-226ENST00000486021 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
CPNE1-226ENST00000486021 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
CPNE1-226ENST00000486021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.4□□□□□ -0.59
CPNE1-226ENST00000486021 LMTK2Q8IWU2 1503 aa11.4□□□□□ -0.59
CPNE1-226ENST00000486021 MED14O60244 1454 aa11.39□□□□□ -0.59
CPNE1-226ENST00000486021 RPRD2Q5VT52 1461 aaKnown RBP11.39□□□□□ -0.59
CPNE1-226ENST00000486021 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
CPNE1-226ENST00000486021 NPHP4O75161 1426 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-226ENST00000486021 TOM1O60784 492 aa11.38□□□□□ -0.59
CPNE1-226ENST00000486021 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
CPNE1-226ENST00000486021 TET3O43151 1660 aa11.38□□□□□ -0.59
CPNE1-226ENST00000486021 ROCK1Q13464 1354 aa11.37□□□□□ -0.59
CPNE1-226ENST00000486021 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-226ENST00000486021 SYNMO15061 1565 aa11.36□□□□□ -0.59
CPNE1-226ENST00000486021 VWDEQ8N2E2 1590 aa11.36□□□□□ -0.59
CPNE1-226ENST00000486021 NEURL4Q96JN8 1562 aa11.36□□□□□ -0.59
CPNE1-226ENST00000486021 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
CPNE1-226ENST00000486021 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
CPNE1-226ENST00000486021 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
CPNE1-226ENST00000486021 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
CPNE1-226ENST00000486021 SLIT1O75093 1534 aa11.35□□□□□ -0.59
CPNE1-226ENST00000486021 UNC13BO14795 1591 aa11.34□□□□□ -0.59
CPNE1-226ENST00000486021 TXNDC2Q86VQ3 553 aa11.34□□□□□ -0.59
CPNE1-226ENST00000486021 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
CPNE1-226ENST00000486021 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.31□□□□□ -0.6
CPNE1-226ENST00000486021 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
CPNE1-226ENST00000486021 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
CPNE1-226ENST00000486021 ADGRB3O60242 1522 aa11.3□□□□□ -0.6
CPNE1-226ENST00000486021 NOS1P29475 1434 aa11.3□□□□□ -0.6
CPNE1-226ENST00000486021 BCANQ96GW7 911 aa11.3□□□□□ -0.6
CPNE1-226ENST00000486021 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
CPNE1-226ENST00000486021 MYO5BQ9ULV0 1848 aa11.3□□□□□ -0.6
CPNE1-226ENST00000486021 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
CPNE1-226ENST00000486021 ITGAEP38570 1179 aa11.29□□□□□ -0.6
CPNE1-226ENST00000486021 IDI1Q13907 227 aa11.29□□□□□ -0.6
CPNE1-226ENST00000486021 E9PCH4 1651 aa11.28□□□□□ -0.6
CPNE1-226ENST00000486021 PPP1R15AO75807 674 aaPredicted RBP11.28□□□□□ -0.6
CPNE1-226ENST00000486021 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
CPNE1-226ENST00000486021 KIF1BO60333 1816 aa11.27□□□□□ -0.61
CPNE1-226ENST00000486021 NUP155O75694 1391 aa11.27□□□□□ -0.61
CPNE1-226ENST00000486021 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
CPNE1-226ENST00000486021 STRCP1A6NGW2 1772 aa11.25□□□□□ -0.61
CPNE1-226ENST00000486021 RRBP1Q9P2E9 1410 aaKnown RBP11.25□□□□□ -0.61
CPNE1-226ENST00000486021 CHD2O14647 1828 aaKnown RBP11.24□□□□□ -0.61
CPNE1-226ENST00000486021 LTKP29376 864 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms