RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 TCOF1Q13428 1488 aaKnown RBP32.29■■■□□ 2.76
CHRD-215ENST00000485883 TSPY4P0CV99 314 aa32.27■■■□□ 2.76
CHRD-215ENST00000485883 TSPY10P0CW01 314 aa32.27■■■□□ 2.76
CHRD-215ENST00000485883 ARHGEF5Q12774 1597 aa32.27■■■□□ 2.76
CHRD-215ENST00000485883 A2ML1A8K2U0 1454 aa32.25■■■□□ 2.75
CHRD-215ENST00000485883 WASHC2CQ9Y4E1 1318 aa32.25■■■□□ 2.75
CHRD-215ENST00000485883 KDM5DQ9BY66 1539 aa32.24■■■□□ 2.75
CHRD-215ENST00000485883 TNRQ92752 1358 aa32.22■■■□□ 2.75
CHRD-215ENST00000485883 DNMT1P26358 1616 aaKnown RBP32.22■■■□□ 2.75
CHRD-215ENST00000485883 PZPP20742 1482 aa32.21■■■□□ 2.75
CHRD-215ENST00000485883 IQSEC2Q5JU85 1478 aa32.21■■■□□ 2.75
CHRD-215ENST00000485883 MAP3K1Q13233 1512 aa32.16■■■□□ 2.74
CHRD-215ENST00000485883 FAM135AQ9P2D6 1515 aa32.16■■■□□ 2.74
CHRD-215ENST00000485883 MYOM3Q5VTT5 1437 aa32.12■■■□□ 2.73
CHRD-215ENST00000485883 MAST1Q9Y2H9 1570 aa32.11■■■□□ 2.73
CHRD-215ENST00000485883 MIA2Q96PC5 1412 aa32.11■■■□□ 2.73
CHRD-215ENST00000485883 DISP3Q9P2K9 1392 aa32.1■■■□□ 2.73
CHRD-215ENST00000485883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.07■■■□□ 2.73
CHRD-215ENST00000485883 UBAP1LF5GYI3 381 aa32.07■■■□□ 2.72
CHRD-215ENST00000485883 RNF17Q9BXT8 1623 aaKnown RBP32.06■■■□□ 2.72
CHRD-215ENST00000485883 NEURL4Q96JN8 1562 aa32.06■■■□□ 2.72
CHRD-215ENST00000485883 ABCC3O15438 1527 aa32.05■■■□□ 2.72
CHRD-215ENST00000485883 ILDR2Q71H61 639 aa32.03■■■□□ 2.72
CHRD-215ENST00000485883 NLRP1Q9C000 1473 aa32.03■■■□□ 2.72
CHRD-215ENST00000485883 ANKLE2Q86XL3 938 aa32.02■■■□□ 2.72
CHRD-215ENST00000485883 THEMISQ8N1K5 641 aaPredicted RBP32.02■■■□□ 2.72
CHRD-215ENST00000485883 POLR1AO95602 1720 aaPredicted RBP32.01■■■□□ 2.72
CHRD-215ENST00000485883 UGGT1Q9NYU2 1555 aa32■■■□□ 2.71
CHRD-215ENST00000485883 MROH1Q8NDA8 1641 aa31.99■■■□□ 2.71
CHRD-215ENST00000485883 EIF2AK4Q9P2K8 1649 aaKnown RBP31.97■■■□□ 2.71
CHRD-215ENST00000485883 SPATA31D1Q6ZQQ2 1576 aa31.95■■■□□ 2.71
CHRD-215ENST00000485883 ABCC5O15440 1437 aa31.95■■■□□ 2.71
CHRD-215ENST00000485883 ERVK-7P63135 1459 aa31.94■■■□□ 2.7
CHRD-215ENST00000485883 SHANK2Q9UPX8 1470 aa31.94■■■□□ 2.7
CHRD-215ENST00000485883 ZC3H13Q5T200 1668 aaKnown RBP31.94■■■□□ 2.7
CHRD-215ENST00000485883 DUOX2Q9NRD8 1548 aa31.94■■■□□ 2.7
CHRD-215ENST00000485883 APLP2Q06481 763 aa31.93■■■□□ 2.7
CHRD-215ENST00000485883 RRP7BPQ9NSQ0 103 aa31.93■■■□□ 2.7
CHRD-215ENST00000485883 KIF15Q9NS87 1388 aa31.93■■■□□ 2.7
CHRD-215ENST00000485883 NPHP4O75161 1426 aaPredicted RBP31.92■■■□□ 2.7
CHRD-215ENST00000485883 CEP152O94986 1710 aa31.9■■■□□ 2.7
CHRD-215ENST00000485883 MED14O60244 1454 aa31.9■■■□□ 2.7
CHRD-215ENST00000485883 PTPN23Q9H3S7 1636 aa31.89■■■□□ 2.7
CHRD-215ENST00000485883 CPS1P31327 1500 aa31.88■■■□□ 2.69
CHRD-215ENST00000485883 VWDEQ8N2E2 1590 aa31.88■■■□□ 2.69
CHRD-215ENST00000485883 DEPDC5O75140 1603 aa31.87■■■□□ 2.69
CHRD-215ENST00000485883 DAPK1P53355 1430 aa31.85■■■□□ 2.69
CHRD-215ENST00000485883 CFAP65Q6ZU64 1925 aaKnown RBP31.85■■■□□ 2.69
CHRD-215ENST00000485883 CROCC2H7BZ55 1655 aa31.84■■■□□ 2.69
CHRD-215ENST00000485883 FGD6Q6ZV73 1430 aa31.83■■■□□ 2.69
CHRD-215ENST00000485883 ERBINQ96RT1 1412 aa31.83■■■□□ 2.69
CHRD-215ENST00000485883 PIP4K2BP78356 416 aa31.83■■■□□ 2.69
CHRD-215ENST00000485883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.83■■■□□ 2.693e-7■■□□□ 11.9
CHRD-215ENST00000485883 SCAF1Q9H7N4 1312 aaKnown RBP31.82■■■□□ 2.68
CHRD-215ENST00000485883 PRDM15P57071 1507 aaPredicted RBP31.81■■■□□ 2.68
CHRD-215ENST00000485883 CHIC2Q9UKJ5 165 aa31.81■■■□□ 2.68
CHRD-215ENST00000485883 IQGAP1P46940 1657 aa31.8■■■□□ 2.68
CHRD-215ENST00000485883 TOM1O60784 492 aa31.79■■■□□ 2.68
CHRD-215ENST00000485883 ARHGAP31Q2M1Z3 1444 aa31.78■■■□□ 2.68
CHRD-215ENST00000485883 HSPA1LP34931 641 aa31.77■■■□□ 2.68
CHRD-215ENST00000485883 UBR1Q8IWV7 1749 aa31.76■■■□□ 2.67
CHRD-215ENST00000485883 SOCS7O14512 581 aa31.74■■■□□ 2.67
CHRD-215ENST00000485883 LTKP29376 864 aa31.74■■■□□ 2.67
CHRD-215ENST00000485883 STRCP1A6NGW2 1772 aa31.71■■■□□ 2.67
CHRD-215ENST00000485883 ANKRD30AQ9BXX3 1397 aa31.71■■■□□ 2.67
CHRD-215ENST00000485883 SCAF11Q99590 1463 aaKnown RBP31.71■■■□□ 2.67
CHRD-215ENST00000485883 TXNDC2Q86VQ3 553 aa31.7■■■□□ 2.67
CHRD-215ENST00000485883 ALKQ9UM73 1620 aa31.69■■■□□ 2.66
CHRD-215ENST00000485883 KANK1Q14678 1352 aa31.68■■■□□ 2.66
CHRD-215ENST00000485883 ARHGAP23Q9P227 1491 aa31.68■■■□□ 2.66
CHRD-215ENST00000485883 LRRC7Q96NW7 1537 aa31.67■■■□□ 2.66
CHRD-215ENST00000485883 SLIT1O75093 1534 aa31.66■■■□□ 2.66
CHRD-215ENST00000485883 PIK3C2BO00750 1634 aa31.63■■■□□ 2.65
CHRD-215ENST00000485883 FAM50AQ14320 339 aaKnown RBP31.62■■■□□ 2.65
CHRD-215ENST00000485883 LMTK2Q8IWU2 1503 aa31.62■■■□□ 2.65
CHRD-215ENST00000485883 IDI1Q13907 227 aa31.61■■■□□ 2.65
CHRD-215ENST00000485883 STAG3Q9UJ98 1225 aa31.6■■■□□ 2.65
CHRD-215ENST00000485883 EID1Q9Y6B2 187 aa31.6■■■□□ 2.65
CHRD-215ENST00000485883 TMEM2Q9UHN6 1383 aa31.59■■■□□ 2.65
CHRD-215ENST00000485883 ADGRL2O95490 1459 aa31.58■■■□□ 2.65
CHRD-215ENST00000485883 SENP3Q9H4L4 574 aaPredicted RBP31.56■■■□□ 2.64
CHRD-215ENST00000485883 SYNMO15061 1565 aa31.56■■■□□ 2.64
CHRD-215ENST00000485883 NOS1P29475 1434 aa31.53■■■□□ 2.64
CHRD-215ENST00000485883 EFCAB6Q5THR3 1501 aa31.52■■■□□ 2.64
CHRD-215ENST00000485883 MED1Q15648 1581 aaPredicted RBP31.51■■■□□ 2.64
CHRD-215ENST00000485883 ANKRD50Q9ULJ7 1429 aa31.5■■■□□ 2.63
CHRD-215ENST00000485883 KDM5AP29375 1690 aaKnown RBP31.45■■■□□ 2.63
CHRD-215ENST00000485883 SLC26A8Q96RN1 970 aa31.45■■■□□ 2.63
CHRD-215ENST00000485883 SLC52A1Q9NWF4 448 aa31.43■■■□□ 2.62
CHRD-215ENST00000485883 XIRP1Q702N8 1843 aaKnown RBP31.42■■■□□ 2.62
CHRD-215ENST00000485883 ADGRB3O60242 1522 aa31.42■■■□□ 2.62
CHRD-215ENST00000485883 TET3O43151 1660 aa31.41■■■□□ 2.62
CHRD-215ENST00000485883 KCNA6P17658 529 aa31.39■■■□□ 2.62
CHRD-215ENST00000485883 RBM33Q96EV2 1170 aaKnown RBP31.38■■■□□ 2.61
CHRD-215ENST00000485883 TMEM94Q12767 1356 aa31.38■■■□□ 2.61
CHRD-215ENST00000485883 RPRD2Q5VT52 1461 aaKnown RBP31.38■■■□□ 2.61
CHRD-215ENST00000485883 BCANQ96GW7 911 aa31.33■■■□□ 2.61
CHRD-215ENST00000485883 PROSER2Q86WR7 435 aaPredicted RBP31.32■■■□□ 2.6
CHRD-215ENST00000485883 PHF23Q9BUL5 403 aaPredicted RBP31.32■■■□□ 2.6
CHRD-215ENST00000485883 ZFYVE9O95405 1425 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 354.9 ms