RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
DDX39B-221ENST00000484566 AGLP35573 1532 aa14.16□□□□□ -0.14
DDX39B-221ENST00000484566 CAMSAP1Q5T5Y3 1602 aa14.16□□□□□ -0.14
DDX39B-221ENST00000484566 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
DDX39B-221ENST00000484566 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
DDX39B-221ENST00000484566 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
DDX39B-221ENST00000484566 CDC42BPBQ9Y5S2 1711 aa14.13□□□□□ -0.15
DDX39B-221ENST00000484566 PREX2Q70Z35 1606 aa14.13□□□□□ -0.15
DDX39B-221ENST00000484566 ABCC1P33527 1531 aa14.13□□□□□ -0.15
DDX39B-221ENST00000484566 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
DDX39B-221ENST00000484566 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
DDX39B-221ENST00000484566 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX39B-221ENST00000484566 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
DDX39B-221ENST00000484566 MROH2AA6NES4 1674 aa14.1□□□□□ -0.15
DDX39B-221ENST00000484566 NPATQ14207 1427 aa14.1□□□□□ -0.15
DDX39B-221ENST00000484566 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
DDX39B-221ENST00000484566 KIDINS220Q9ULH0 1771 aa14.09□□□□□ -0.15
DDX39B-221ENST00000484566 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
DDX39B-221ENST00000484566 LRRIQ1Q96JM4 1722 aa14.09□□□□□ -0.15
DDX39B-221ENST00000484566 PKD2Q13563 968 aa14.07□□□□□ -0.16
DDX39B-221ENST00000484566 SUPT6HQ7KZ85 1726 aaKnown RBP14.07□□□□□ -0.16
DDX39B-221ENST00000484566 PTPRKQ15262 1439 aa14.07□□□□□ -0.16
DDX39B-221ENST00000484566 CCDC18Q5T9S5 1454 aa14.06□□□□□ -0.16
DDX39B-221ENST00000484566 MYO3AQ8NEV4 1616 aa14.05□□□□□ -0.16
DDX39B-221ENST00000484566 ZNF142P52746 1687 aaPredicted RBP14.05□□□□□ -0.16
DDX39B-221ENST00000484566 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
DDX39B-221ENST00000484566 PLA2R1Q13018 1463 aa14.05□□□□□ -0.16
DDX39B-221ENST00000484566 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
DDX39B-221ENST00000484566 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
DDX39B-221ENST00000484566 CPS1P31327 1500 aa14.04□□□□□ -0.16
DDX39B-221ENST00000484566 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
DDX39B-221ENST00000484566 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
DDX39B-221ENST00000484566 CLTCQ00610 1675 aaKnown RBP14.02□□□□□ -0.16
DDX39B-221ENST00000484566 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.16
DDX39B-221ENST00000484566 SYCP2Q9BX26 1530 aa14.01□□□□□ -0.17
DDX39B-221ENST00000484566 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
DDX39B-221ENST00000484566 CASKIN1Q8WXD9 1431 aa13.99□□□□□ -0.17
DDX39B-221ENST00000484566 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
DDX39B-221ENST00000484566 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
DDX39B-221ENST00000484566 PROM2Q8N271 834 aa13.99□□□□□ -0.17
DDX39B-221ENST00000484566 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
DDX39B-221ENST00000484566 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
DDX39B-221ENST00000484566 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
DDX39B-221ENST00000484566 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
DDX39B-221ENST00000484566 SHANK2Q9UPX8 1470 aa13.97□□□□□ -0.17
DDX39B-221ENST00000484566 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.17
DDX39B-221ENST00000484566 A2MP01023 1474 aa13.96□□□□□ -0.17
DDX39B-221ENST00000484566 PLEKHH2Q8IVE3 1493 aa13.96□□□□□ -0.17
DDX39B-221ENST00000484566 FYCO1Q9BQS8 1478 aa13.94□□□□□ -0.18
DDX39B-221ENST00000484566 POLR1AO95602 1720 aaPredicted RBP13.94□□□□□ -0.18
DDX39B-221ENST00000484566 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
DDX39B-221ENST00000484566 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
DDX39B-221ENST00000484566 GGT6Q6P531 493 aa13.93□□□□□ -0.18
DDX39B-221ENST00000484566 ADGBQ8N7X0 1667 aa13.93□□□□□ -0.18
DDX39B-221ENST00000484566 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
DDX39B-221ENST00000484566 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
DDX39B-221ENST00000484566 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDX39B-221ENST00000484566 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
DDX39B-221ENST00000484566 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
DDX39B-221ENST00000484566 CCNB3Q8WWL7 1395 aa13.89□□□□□ -0.19
DDX39B-221ENST00000484566 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
DDX39B-221ENST00000484566 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
DDX39B-221ENST00000484566 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
DDX39B-221ENST00000484566 TNRQ92752 1358 aa13.85□□□□□ -0.19
DDX39B-221ENST00000484566 VWDEQ8N2E2 1590 aa13.85□□□□□ -0.19
DDX39B-221ENST00000484566 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
DDX39B-221ENST00000484566 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
DDX39B-221ENST00000484566 PZPP20742 1482 aa13.83□□□□□ -0.2
DDX39B-221ENST00000484566 MTUS2Q5JR59 1369 aa13.83□□□□□ -0.2
DDX39B-221ENST00000484566 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
DDX39B-221ENST00000484566 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
DDX39B-221ENST00000484566 STRCP1A6NGW2 1772 aa13.81□□□□□ -0.2
DDX39B-221ENST00000484566 ANKLE2Q86XL3 938 aa13.81□□□□□ -0.2
DDX39B-221ENST00000484566 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
DDX39B-221ENST00000484566 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
DDX39B-221ENST00000484566 TIAM1Q13009 1591 aa13.8□□□□□ -0.2
DDX39B-221ENST00000484566 DEPDC5O75140 1603 aa13.8□□□□□ -0.2
DDX39B-221ENST00000484566 DHX29Q7Z478 1369 aaKnown RBP13.8□□□□□ -0.2
DDX39B-221ENST00000484566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.8□□□□□ -0.2
DDX39B-221ENST00000484566 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-221ENST00000484566 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
DDX39B-221ENST00000484566 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
DDX39B-221ENST00000484566 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
DDX39B-221ENST00000484566 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
DDX39B-221ENST00000484566 SYNMO15061 1565 aa13.79□□□□□ -0.2
DDX39B-221ENST00000484566 KIF3BO15066 747 aa13.78□□□□□ -0.2
DDX39B-221ENST00000484566 FBXO31Q5XUX0 539 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-221ENST00000484566 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-221ENST00000484566 MED14O60244 1454 aa13.78□□□□□ -0.2
DDX39B-221ENST00000484566 MBD5Q9P267 1494 aa13.78□□□□□ -0.2
DDX39B-221ENST00000484566 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX39B-221ENST00000484566 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
DDX39B-221ENST00000484566 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
DDX39B-221ENST00000484566 MIA2Q96PC5 1412 aa13.76□□□□□ -0.21
DDX39B-221ENST00000484566 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-221ENST00000484566 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
DDX39B-221ENST00000484566 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
DDX39B-221ENST00000484566 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
DDX39B-221ENST00000484566 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
DDX39B-221ENST00000484566 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms