RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 USP47Q96K76 1375 aa19.8■□□□□ 0.76
ABCD4-212ENST00000484380 BCORL1Q5H9F3 1711 aa19.8■□□□□ 0.76
ABCD4-212ENST00000484380 ZFYVE16Q7Z3T8 1539 aa19.8■□□□□ 0.76
ABCD4-212ENST00000484380 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
ABCD4-212ENST00000484380 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
ABCD4-212ENST00000484380 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
ABCD4-212ENST00000484380 ARID4BQ4LE39 1312 aaPredicted RBP19.78■□□□□ 0.76
ABCD4-212ENST00000484380 PLA2R1Q13018 1463 aa19.77■□□□□ 0.76
ABCD4-212ENST00000484380 CCDC144AA2RUR9 1427 aa19.77■□□□□ 0.76
ABCD4-212ENST00000484380 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
ABCD4-212ENST00000484380 INO80Q9ULG1 1556 aaPredicted RBP19.77■□□□□ 0.75
ABCD4-212ENST00000484380 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
ABCD4-212ENST00000484380 TRPM1Q7Z4N2 1603 aa19.76■□□□□ 0.75
ABCD4-212ENST00000484380 LAMC1P11047 1609 aa19.75■□□□□ 0.75
ABCD4-212ENST00000484380 FANCAO15360 1455 aa19.71■□□□□ 0.75
ABCD4-212ENST00000484380 PRAG1Q86YV5 1406 aa19.71■□□□□ 0.75
ABCD4-212ENST00000484380 SUPT16HQ9Y5B9 1047 aaKnown RBP19.71■□□□□ 0.75
ABCD4-212ENST00000484380 EIF2AK4Q9P2K8 1649 aaKnown RBP19.71■□□□□ 0.75
ABCD4-212ENST00000484380 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
ABCD4-212ENST00000484380 PRKRIP1Q9H875 184 aaPredicted RBP19.69■□□□□ 0.74
ABCD4-212ENST00000484380 A2MP01023 1474 aa19.69■□□□□ 0.74
ABCD4-212ENST00000484380 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
ABCD4-212ENST00000484380 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
ABCD4-212ENST00000484380 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
ABCD4-212ENST00000484380 ROCK2O75116 1388 aaKnown RBP19.69■□□□□ 0.74
ABCD4-212ENST00000484380 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
ABCD4-212ENST00000484380 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
ABCD4-212ENST00000484380 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
ABCD4-212ENST00000484380 SPAG9O60271 1321 aaKnown RBP19.68■□□□□ 0.74
ABCD4-212ENST00000484380 E9PCH4 1651 aa19.68■□□□□ 0.74
ABCD4-212ENST00000484380 VWDEQ8N2E2 1590 aa19.67■□□□□ 0.74
ABCD4-212ENST00000484380 GPRASP1Q5JY77 1395 aa19.67■□□□□ 0.74
ABCD4-212ENST00000484380 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
ABCD4-212ENST00000484380 TET3O43151 1660 aa19.66■□□□□ 0.74
ABCD4-212ENST00000484380 TRPM2O94759 1503 aa19.66■□□□□ 0.74
ABCD4-212ENST00000484380 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
ABCD4-212ENST00000484380 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
ABCD4-212ENST00000484380 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.74
ABCD4-212ENST00000484380 RNF17Q9BXT8 1623 aaKnown RBP19.64■□□□□ 0.73
ABCD4-212ENST00000484380 ADGRL1O94910 1474 aa19.64■□□□□ 0.73
ABCD4-212ENST00000484380 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.73
ABCD4-212ENST00000484380 PRDM15P57071 1507 aaPredicted RBP19.63■□□□□ 0.73
ABCD4-212ENST00000484380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.73
ABCD4-212ENST00000484380 CEP152O94986 1710 aa19.63■□□□□ 0.73
ABCD4-212ENST00000484380 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
ABCD4-212ENST00000484380 PTPRTO14522 1441 aa19.6■□□□□ 0.73
ABCD4-212ENST00000484380 NEURL4Q96JN8 1562 aa19.6■□□□□ 0.73
ABCD4-212ENST00000484380 MROH1Q8NDA8 1641 aa19.59■□□□□ 0.73
ABCD4-212ENST00000484380 AFAP1Q8N556 730 aa19.59■□□□□ 0.73
ABCD4-212ENST00000484380 KDM2AQ9Y2K7 1162 aa19.59■□□□□ 0.73
ABCD4-212ENST00000484380 SCAPERQ9BY12 1400 aa19.58■□□□□ 0.73
ABCD4-212ENST00000484380 KIDINS220Q9ULH0 1771 aa19.58■□□□□ 0.72
ABCD4-212ENST00000484380 MADDQ8WXG6 1647 aa19.56■□□□□ 0.72
ABCD4-212ENST00000484380 CLTCL1P53675 1640 aa19.55■□□□□ 0.72
ABCD4-212ENST00000484380 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
ABCD4-212ENST00000484380 ST20-MTHFSA0A0A6YYL1 179 aa19.54■□□□□ 0.72
ABCD4-212ENST00000484380 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
ABCD4-212ENST00000484380 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
ABCD4-212ENST00000484380 KANK1Q14678 1352 aa19.53■□□□□ 0.72
ABCD4-212ENST00000484380 COL17A1Q9UMD9 1497 aaPredicted RBP19.53■□□□□ 0.72
ABCD4-212ENST00000484380 MRS2Q9HD23 443 aa19.52■□□□□ 0.72
ABCD4-212ENST00000484380 KTN1Q86UP2 1357 aaKnown RBP19.52■□□□□ 0.72
ABCD4-212ENST00000484380 LMTK2Q8IWU2 1503 aa19.51■□□□□ 0.71
ABCD4-212ENST00000484380 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
ABCD4-212ENST00000484380 EFCAB6Q5THR3 1501 aa19.5■□□□□ 0.71
ABCD4-212ENST00000484380 RGL3Q3MIN7 710 aa19.5■□□□□ 0.71
ABCD4-212ENST00000484380 STAC3Q96MF2 364 aa19.5■□□□□ 0.71
ABCD4-212ENST00000484380 KIAA1210Q9ULL0 1709 aa19.49■□□□□ 0.71
ABCD4-212ENST00000484380 POGZQ7Z3K3 1410 aa19.48■□□□□ 0.71
ABCD4-212ENST00000484380 MLH3Q9UHC1 1453 aa19.47■□□□□ 0.71
ABCD4-212ENST00000484380 ZBED9Q6R2W3 1325 aa19.47■□□□□ 0.71
ABCD4-212ENST00000484380 HECW2Q9P2P5 1572 aa19.47■□□□□ 0.71
ABCD4-212ENST00000484380 NEFLP07196 543 aa19.46■□□□□ 0.71
ABCD4-212ENST00000484380 CD109Q6YHK3 1445 aa19.46■□□□□ 0.71
ABCD4-212ENST00000484380 NBPF1Q3BBV0 1214 aa19.46■□□□□ 0.71
ABCD4-212ENST00000484380 PPRC1Q5VV67 1664 aaKnown RBP19.45■□□□□ 0.7
ABCD4-212ENST00000484380 FKBP8Q14318 412 aa19.44■□□□□ 0.7
ABCD4-212ENST00000484380 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
ABCD4-212ENST00000484380 FRMPD1Q5SYB0 1578 aa19.43■□□□□ 0.7
ABCD4-212ENST00000484380 IFT172Q9UG01 1749 aa19.43■□□□□ 0.7
ABCD4-212ENST00000484380 NEO1Q92859 1461 aa19.43■□□□□ 0.7
ABCD4-212ENST00000484380 KIF1BO60333 1816 aa19.43■□□□□ 0.7
ABCD4-212ENST00000484380 TESK2Q96S53 571 aa19.42■□□□□ 0.7
ABCD4-212ENST00000484380 MYOM2P54296 1465 aa19.42■□□□□ 0.7
ABCD4-212ENST00000484380 KIF3BO15066 747 aa19.41■□□□□ 0.7
ABCD4-212ENST00000484380 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
ABCD4-212ENST00000484380 RALBP1Q15311 655 aa19.39■□□□□ 0.7
ABCD4-212ENST00000484380 ABCA6Q8N139 1617 aa19.39■□□□□ 0.7
ABCD4-212ENST00000484380 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.69
ABCD4-212ENST00000484380 MAP3K4Q9Y6R4 1608 aa19.39■□□□□ 0.69
ABCD4-212ENST00000484380 DISP3Q9P2K9 1392 aa19.38■□□□□ 0.69
ABCD4-212ENST00000484380 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
ABCD4-212ENST00000484380 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
ABCD4-212ENST00000484380 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
ABCD4-212ENST00000484380 WASHC2CQ9Y4E1 1318 aa19.36■□□□□ 0.69
ABCD4-212ENST00000484380 MROH2AA6NES4 1674 aa19.36■□□□□ 0.69
ABCD4-212ENST00000484380 ADGRB3O60242 1522 aa19.35■□□□□ 0.69
ABCD4-212ENST00000484380 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
ABCD4-212ENST00000484380 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
ABCD4-212ENST00000484380 TMF1P82094 1093 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms