RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
NCL-209ENST00000484328 VWDEQ8N2E2 1590 aa9.75□□□□□ -0.85
NCL-209ENST00000484328 ANKRD50Q9ULJ7 1429 aa9.75□□□□□ -0.85
NCL-209ENST00000484328 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
NCL-209ENST00000484328 IQGAP3Q86VI3 1631 aa9.74□□□□□ -0.85
NCL-209ENST00000484328 ADAMTSL3P82987 1691 aa9.74□□□□□ -0.85
NCL-209ENST00000484328 ITGAEP38570 1179 aa9.73□□□□□ -0.85
NCL-209ENST00000484328 CHIC2Q9UKJ5 165 aa9.73□□□□□ -0.85
NCL-209ENST00000484328 MROH2AA6NES4 1674 aa9.73□□□□□ -0.85
NCL-209ENST00000484328 FER1L4A9Z1Z3 1794 aa9.73□□□□□ -0.85
NCL-209ENST00000484328 LMTK2Q8IWU2 1503 aa9.72□□□□□ -0.85
NCL-209ENST00000484328 CEP152O94986 1710 aa9.71□□□□□ -0.85
NCL-209ENST00000484328 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.86
NCL-209ENST00000484328 SETD5Q9C0A6 1442 aa9.71□□□□□ -0.86
NCL-209ENST00000484328 CAMSAP1Q5T5Y3 1602 aa9.71□□□□□ -0.86
NCL-209ENST00000484328 MADDQ8WXG6 1647 aa9.71□□□□□ -0.86
NCL-209ENST00000484328 ABCC3O15438 1527 aa9.7□□□□□ -0.86
NCL-209ENST00000484328 TET3O43151 1660 aa9.7□□□□□ -0.86
NCL-209ENST00000484328 CLTCQ00610 1675 aaKnown RBP9.7□□□□□ -0.86
NCL-209ENST00000484328 EFCAB6Q5THR3 1501 aa9.69□□□□□ -0.86
NCL-209ENST00000484328 MYT1LQ9UL68 1186 aa9.69□□□□□ -0.86
NCL-209ENST00000484328 RAB3GAP2Q9H2M9 1393 aa9.68□□□□□ -0.86
NCL-209ENST00000484328 PZPP20742 1482 aa9.67□□□□□ -0.86
NCL-209ENST00000484328 E9PCH4 1651 aa9.67□□□□□ -0.86
NCL-209ENST00000484328 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
NCL-209ENST00000484328 C3P01024 1663 aa9.66□□□□□ -0.86
NCL-209ENST00000484328 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
NCL-209ENST00000484328 ACIN1Q9UKV3 1341 aaKnown RBP9.65□□□□□ -0.86
NCL-209ENST00000484328 KIF3BO15066 747 aa9.65□□□□□ -0.86
NCL-209ENST00000484328 HRCP23327 699 aa9.65□□□□□ -0.86
NCL-209ENST00000484328 RPRD2Q5VT52 1461 aaKnown RBP9.64□□□□□ -0.87
NCL-209ENST00000484328 PREX1Q8TCU6 1659 aa9.64□□□□□ -0.87
NCL-209ENST00000484328 ARHGAP31Q2M1Z3 1444 aa9.64□□□□□ -0.87
NCL-209ENST00000484328 SPHKAPQ2M3C7 1700 aa9.63□□□□□ -0.87
NCL-209ENST00000484328 PPP6R1Q9UPN7 881 aa9.63□□□□□ -0.87
NCL-209ENST00000484328 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
NCL-209ENST00000484328 KANK1Q14678 1352 aa9.63□□□□□ -0.87
NCL-209ENST00000484328 NPATQ14207 1427 aa9.62□□□□□ -0.87
NCL-209ENST00000484328 ARID4BQ4LE39 1312 aaPredicted RBP9.61□□□□□ -0.87
NCL-209ENST00000484328 PCGF6Q9BYE7 350 aa9.61□□□□□ -0.87
NCL-209ENST00000484328 NUP155O75694 1391 aa9.61□□□□□ -0.87
NCL-209ENST00000484328 PIK3C2BO00750 1634 aa9.6□□□□□ -0.87
NCL-209ENST00000484328 SYNMO15061 1565 aa9.6□□□□□ -0.87
NCL-209ENST00000484328 GGT6Q6P531 493 aa9.6□□□□□ -0.87
NCL-209ENST00000484328 TRPM2O94759 1503 aa9.6□□□□□ -0.87
NCL-209ENST00000484328 PTPRMP28827 1452 aa9.59□□□□□ -0.87
NCL-209ENST00000484328 ZNF142P52746 1687 aaPredicted RBP9.59□□□□□ -0.87
NCL-209ENST00000484328 MYO3AQ8NEV4 1616 aa9.59□□□□□ -0.87
NCL-209ENST00000484328 ERVK-7P63135 1459 aa9.59□□□□□ -0.87
NCL-209ENST00000484328 NOS1P29475 1434 aa9.58□□□□□ -0.88
NCL-209ENST00000484328 MLECQ14165 292 aa9.58□□□□□ -0.88
NCL-209ENST00000484328 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
NCL-209ENST00000484328 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
NCL-209ENST00000484328 PTPRTO14522 1441 aa9.57□□□□□ -0.88
NCL-209ENST00000484328 ZMYM3Q14202 1370 aa9.57□□□□□ -0.88
NCL-209ENST00000484328 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
NCL-209ENST00000484328 PLA2R1Q13018 1463 aa9.56□□□□□ -0.88
NCL-209ENST00000484328 DHX57Q6P158 1386 aaKnown RBP9.56□□□□□ -0.88
NCL-209ENST00000484328 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
NCL-209ENST00000484328 PIAS4Q8N2W9 510 aaPredicted RBP9.56□□□□□ -0.88
NCL-209ENST00000484328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.882e-82■■■■■ 29.8
NCL-209ENST00000484328 MPHOSPH9Q99550 1183 aa9.55□□□□□ -0.88
NCL-209ENST00000484328 NEURL4Q96JN8 1562 aa9.54□□□□□ -0.88
NCL-209ENST00000484328 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
NCL-209ENST00000484328 UGGT1Q9NYU2 1555 aa9.54□□□□□ -0.88
NCL-209ENST00000484328 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
NCL-209ENST00000484328 CEP170BQ9Y4F5 1589 aaPredicted RBP9.53□□□□□ -0.88
NCL-209ENST00000484328 UBR1Q8IWV7 1749 aa9.53□□□□□ -0.88
NCL-209ENST00000484328 NLRP1Q9C000 1473 aa9.53□□□□□ -0.88
NCL-209ENST00000484328 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.88
NCL-209ENST00000484328 ADGRB3O60242 1522 aa9.52□□□□□ -0.88
NCL-209ENST00000484328 PKD2Q13563 968 aa9.52□□□□□ -0.89
NCL-209ENST00000484328 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
NCL-209ENST00000484328 TMEM131LA2VDJ0 1609 aa9.52□□□□□ -0.89
NCL-209ENST00000484328 KIF1BO60333 1816 aa9.52□□□□□ -0.89
NCL-209ENST00000484328 ANKRD30BQ9BXX2 1392 aa9.51□□□□□ -0.89
NCL-209ENST00000484328 IFT172Q9UG01 1749 aa9.51□□□□□ -0.89
NCL-209ENST00000484328 TNRQ92752 1358 aa9.5□□□□□ -0.89
NCL-209ENST00000484328 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
NCL-209ENST00000484328 MYO5BQ9ULV0 1848 aa9.5□□□□□ -0.89
NCL-209ENST00000484328 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
NCL-209ENST00000484328 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
NCL-209ENST00000484328 CCDC144AA2RUR9 1427 aa9.48□□□□□ -0.89
NCL-209ENST00000484328 LMTK3Q96Q04 1460 aa9.48□□□□□ -0.89
NCL-209ENST00000484328 CEBPAP49715 358 aaPredicted RBP9.48□□□□□ -0.89
NCL-209ENST00000484328 SPATA31E1Q6ZUB1 1445 aa9.48□□□□□ -0.89
NCL-209ENST00000484328 CLSPNQ9HAW4 1339 aa9.47□□□□□ -0.89
NCL-209ENST00000484328 PPLO60437 1756 aa9.47□□□□□ -0.89
NCL-209ENST00000484328 UHRF1BP1Q6BDS2 1440 aa9.47□□□□□ -0.89
NCL-209ENST00000484328 SLIT1O75093 1534 aa9.46□□□□□ -0.89
NCL-209ENST00000484328 POLR1AO95602 1720 aaPredicted RBP9.46□□□□□ -0.89
NCL-209ENST00000484328 PLPPR3Q6T4P5 718 aa9.46□□□□□ -0.9
NCL-209ENST00000484328 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.9
NCL-209ENST00000484328 SLC52A1Q9NWF4 448 aa9.45□□□□□ -0.9
NCL-209ENST00000484328 ARHGAP23Q9P227 1491 aa9.45□□□□□ -0.9
NCL-209ENST00000484328 ZFYVE9O95405 1425 aa9.43□□□□□ -0.9
NCL-209ENST00000484328 MYOM2P54296 1465 aa9.42□□□□□ -0.9
NCL-209ENST00000484328 IDI1Q13907 227 aa9.42□□□□□ -0.9
NCL-209ENST00000484328 NRXN3Q9Y4C0 1643 aa9.41□□□□□ -0.9
NCL-209ENST00000484328 NRXN1Q9ULB1 1477 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms